Variant report

Variant	nsv544196
Chromosome Location	chr20:14746390-14941319
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:1647)
CpG islands
(count:61)
Chromatin interactive
region (count:54)
LncRNA
region (count:26)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:1647 , 50 per page) page: 1 2 3 4 5 6 7 ... 33

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr20:14859363-14860384	HepG2	liver:	n/a	n/a
2	ARID3A	chr20:14936639-14937073	HepG2	liver:	n/a	n/a
3	ATF2	chr20:14811110-14811561	GM12878	blood:	n/a	n/a
4	ATF2	chr20:14813151-14813770	GM12878	blood:	n/a	n/a
5	ATF2	chr20:14841032-14841474	H1-hESC	embryonic stem cell:	n/a	n/a
6	ATF2	chr20:14811032-14811585	GM12878	blood:	n/a	n/a
7	ATF2	chr20:14841040-14841554	H1-hESC	embryonic stem cell:	n/a	n/a
8	ATF2	chr20:14883084-14883368	GM12878	blood:	n/a	n/a
9	ATF2	chr20:14813148-14813759	GM12878	blood:	n/a	n/a
10	ATF2	chr20:14819109-14819739	GM12878	blood:	n/a	n/a
11	ATF2	chr20:14810438-14810958	GM12878	blood:	n/a	n/a
12	ATF2	chr20:14810438-14811025	GM12878	blood:	n/a	n/a
13	ATF2	chr20:14819159-14819726	GM12878	blood:	n/a	n/a
14	ATF3	chr20:14859595-14860443	A549	lung:	n/a	n/a
15	ATF3	chr20:14859536-14860398	A549	lung:	n/a	n/a
16	ATF3	chr20:14826094-14826569	A549	lung:	n/a	n/a
17	BACH1	chr20:14841074-14841466	H1-hESC	embryonic stem cell:	n/a	n/a
18	BATF	chr20:14833838-14834046	GM12878	blood:	n/a	n/a
19	BATF	chr20:14819247-14819774	GM12878	blood:	n/a	chr20:14819441-14819452
20	BATF	chr20:14860056-14860418	GM12878	blood:	n/a	chr20:14860263-14860273 chr20:14860262-14860273 chr20:14860267-14860277
21	BATF	chr20:14813314-14813717	GM12878	blood:	n/a	n/a
22	BATF	chr20:14883072-14883470	GM12878	blood:	n/a	n/a
23	BATF	chr20:14811158-14811471	GM12878	blood:	n/a	n/a
24	BATF	chr20:14813339-14813704	GM12878	blood:	n/a	n/a
25	BATF	chr20:14826296-14826501	GM12878	blood:	n/a	chr20:14826450-14826460
26	BATF	chr20:14810566-14810958	GM12878	blood:	n/a	n/a
27	BATF	chr20:14819170-14819805	GM12878	blood:	n/a	chr20:14819441-14819452
28	BATF	chr20:14931782-14932075	GM12878	blood:	n/a	n/a
29	BATF	chr20:14810508-14810959	GM12878	blood:	n/a	n/a
30	BATF	chr20:14860106-14860399	GM12878	blood:	n/a	chr20:14860263-14860273 chr20:14860262-14860273 chr20:14860267-14860277
31	BATF	chr20:14811171-14811517	GM12878	blood:	n/a	n/a
32	BATF	chr20:14883118-14883412	GM12878	blood:	n/a	n/a
33	BATF	chr20:14782350-14782619	GM12878	blood:	n/a	chr20:14782584-14782592
34	BCL11A	chr20:14833719-14834115	GM12878	blood:	n/a	n/a
35	BCL11A	chr20:14813268-14813779	GM12878	blood:	n/a	n/a
36	BCL11A	chr20:14813340-14813684	GM12878	blood:	n/a	n/a
37	BCL11A	chr20:14883093-14883400	GM12878	blood:	n/a	chr20:14883229-14883238
38	BCL11A	chr20:14810584-14810953	GM12878	blood:	n/a	chr20:14810705-14810714
39	BCL11A	chr20:14883096-14883392	GM12878	blood:	n/a	chr20:14883229-14883238
40	BCL11A	chr20:14810529-14810966	GM12878	blood:	n/a	chr20:14810705-14810714
41	BCL11A	chr20:14859536-14859807	GM12878	blood:	n/a	n/a
42	BCL11A	chr20:14811187-14811493	GM12878	blood:	n/a	n/a
43	BCL11A	chr20:14841111-14841474	H1-hESC	embryonic stem cell:	n/a	n/a
44	BCL11A	chr20:14819190-14819731	GM12878	blood:	n/a	chr20:14819415-14819424
45	BCL11A	chr20:14819269-14819704	GM12878	blood:	n/a	chr20:14819415-14819424
46	BCL11A	chr20:14833756-14834084	GM12878	blood:	n/a	n/a
47	BCL11A	chr20:14811061-14811585	GM12878	blood:	n/a	chr20:14811164-14811173
48	BCL3	chr20:14859331-14860569	A549	lung:	n/a	chr20:14860151-14860160 chr20:14859419-14859428 chr20:14860265-14860274
49	BCL3	chr20:14859514-14860394	A549	lung:	n/a	chr20:14860151-14860160 chr20:14860265-14860274
50	BCL3	chr20:14825912-14826568	A549	lung:	n/a	chr20:14826452-14826461

(count:61 , 50 per page) page: 1 2

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr20:14904432-14904482	ECC-1	luminal epithelium:	n/a
2	chr20:14904432-14904482	PrEC	prostate:	n/a
3	chr20:14904432-14904482	HUVEC	blood vessel:	n/a
4	chr20:14904432-14904482	HL-60	blood:	n/a
5	chr20:14904432-14904482	AG10803	skin:	n/a
6	chr20:14904432-14904482	GM12878	blood:	n/a
7	chr20:14904432-14904482	HEK293	kidney:	embryo
8	chr20:14904432-14904482	Hepatocyte	liver:	n/a
9	chr20:14904432-14904482	GM12891	blood:	n/a
10	chr20:14904432-14904482	SK-N-SH	brain:	n/a
11	chr20:14904432-14904482	HMEC	breast:	n/a
12	chr20:14904432-14904482	ovcar-3	ovarian:	n/a
13	chr20:14904432-14904482	NT2-D1	testis:	n/a
14	chr20:14904432-14904482	HAEpiC	amniotic membrane:	n/a
15	chr20:14904432-14904482	NB4	blood:	n/a
16	chr20:14904432-14904482	H1-hESC	embryonic stem cell:	embryo
17	chr20:14904432-14904482	GM12892	blood:	n/a
18	chr20:14904432-14904482	Jurkat	blood:	n/a
19	chr20:14904432-14904482	SKMC	muscle:	n/a
20	chr20:14904432-14904482	PANC-1	pancreas:	n/a
21	chr20:14904432-14904482	IMR90	lung:	fetal
22	chr20:14904432-14904482	HNPCEpiC	eye:	n/a
23	chr20:14904432-14904482	A549	lung:	n/a
24	chr20:14904432-14904482	NHDF-neo	bronchial:	n/a
25	chr20:14904432-14904482	GM19239	blood:	n/a
26	chr20:14904432-14904482	AG09319	gingival:	n/a
27	chr20:14904432-14904482	AG09309	skin:	n/a
28	chr20:14904432-14904482	HCT-116	colon:	n/a
29	chr20:14904432-14904482	Caco-2	colon:	n/a
30	chr20:14904432-14904482	SK-N-SH_RA	brain:	n/a
31	chr20:14904432-14904482	MCF-7	breast:	n/a
32	chr20:14904432-14904482	CMK	blood:	n/a
33	chr20:14904432-14904482	HepG2	liver:	n/a
34	chr20:14904432-14904482	BE2_C	brain:	n/a
35	chr20:14904432-14904482	AG04450	lung:	fetal
36	chr20:14904432-14904482	HRPEpiC	eye:	n/a
37	chr20:14904432-14904482	HCF	heart:	n/a
38	chr20:14904432-14904482	T-47D	breast:	n/a
39	chr20:14904432-14904482	HRE	kidney:	n/a
40	chr20:14904432-14904482	PFSK-1	brain:	n/a
41	chr20:14904432-14904482	Hela-S3	cervix:	n/a
42	chr20:14904432-14904482	LNCaP	prostate:	n/a
43	chr20:14904432-14904482	HRCEpiC	kidney:	n/a
44	chr20:14904432-14904482	NHBE	bronchial:	n/a
45	chr20:14904432-14904482	GM06990	blood:	n/a
46	chr20:14904432-14904482	NH-A	brain:	n/a
47	chr20:14904432-14904482	HIPEpiC	eye:	n/a
48	chr20:14904432-14904482	HEEpiC	esophagus:	n/a
49	chr20:14904432-14904482	U87	brain:	n/a
50	chr20:14904432-14904482	SK-N-MC	brain:	n/a

(count:54 , 50 per page) page: 1 2

No.	Distal block	Cell Line	Cell type
1	chr20:14755716..14758614-chr20:14760211..14762111,2	MCF-7	breast:
2	chr20:14838738..14840500-chr20:14846618..14848612,2	MCF-7	breast:
3	chr20:14744879..14746579-chr20:14747938..14749575,2	MCF-7	breast:
4	chr20:14757945..14761170-chr20:14762279..14765371,3	MCF-7	breast:
5	chr20:14819967..14822472-chr20:14824610..14827210,3	MCF-7	breast:
6	chr20:14757945..14761170-chr20:14762279..14765371,3	MCF-7	breast:
7	chr20:14314384..14315320-chr20:14929469..14930347,2	MCF-7	breast:
8	chr20:14845184..14847390-chr20:14926741..14929314,2	MCF-7	breast:
9	chr20:14769951..14772584-chr20:14781634..14783463,2	MCF-7	breast:
10	chr20:14913183..14915031-chr20:14915260..14917096,2	MCF-7	breast:
11	chr20:14733858..14735719-chr20:14744279..14746694,2	MCF-7	breast:
12	chr20:14824570..14828041-chr20:14829297..14833669,5	MCF-7	breast:
13	chr20:14755716..14758614-chr20:14760211..14762111,2	MCF-7	breast:
14	chr20:14837652..14840600-chr20:14844675..14847639,2	MCF-7	breast:
15	chr20:14819830..14820468-chr4:11534089..11534643,2	MCF-7	breast:
16	chr20:14838738..14840500-chr20:14846618..14848612,2	MCF-7	breast:
17	chr20:14845184..14847390-chr20:14926741..14929314,2	MCF-7	breast:
18	chr20:14862084..14865220-chr20:14867174..14871364,3	MCF-7	breast:
19	chr20:14898344..14901833-chr20:14901900..14905742,3	MCF-7	breast:
20	chr20:14867933..14870632-chr20:14873919..14875816,2	MCF-7	breast:
21	chr20:14819967..14822472-chr20:14824610..14827210,3	MCF-7	breast:
22	chr20:14769951..14772584-chr20:14781634..14783463,2	MCF-7	breast:
23	chr20:14803482..14806391-chr20:14809700..14811931,2	MCF-7	breast:
24	chr20:14925222..14927929-chr20:14930721..14932848,2	MCF-7	breast:
25	chr20:14861831..14864729-chr20:14900336..14902240,2	MCF-7	breast:
26	chr20:14767717..14771762-chr20:14774616..14777473,4	MCF-7	breast:
27	chr20:14861831..14864729-chr20:14900336..14902240,2	MCF-7	breast:
28	chr20:14835355..14837300-chr20:14840386..14842306,2	MCF-7	breast:
29	chr20:14895407..14897578-chr20:14900614..14902594,2	MCF-7	breast:
30	chr20:14744879..14746579-chr20:14747938..14749575,2	MCF-7	breast:
31	chr20:14837652..14840600-chr20:14844675..14847639,2	MCF-7	breast:
32	chr20:14898344..14901833-chr20:14901900..14905742,3	MCF-7	breast:
33	chr20:14767717..14771762-chr20:14774616..14777473,4	MCF-7	breast:
34	chr20:14901786..14904742-chr20:14908050..14909865,2	MCF-7	breast:
35	chr20:14824570..14828041-chr20:14829297..14833669,5	MCF-7	breast:
36	chr20:14835355..14837300-chr20:14840386..14842306,2	MCF-7	breast:
37	chr20:14822570..14824766-chr20:14826157..14827975,2	MCF-7	breast:
38	chr20:14856302..14859235-chr20:14930877..14933226,2	MCF-7	breast:
39	chr20:14895407..14897578-chr20:14900614..14902594,2	MCF-7	breast:
40	chr20:14857662..14859546-chr20:15214980..15217486,2	MCF-7	breast:
41	chr20:14859239..14863091-chr20:15040405..15044044,4	MCF-7	breast:
42	chr20:14892181..14894488-chr20:14900218..14901785,2	MCF-7	breast:
43	chr20:14825814..14826804-chr20:14859521..14860363,2	MCF-7	breast:
44	chr20:14905161..14907169-chr20:14915982..14918854,2	MCF-7	breast:
45	chr20:14743071..14745118-chr20:14745452..14747052,2	K562	blood:
46	chr20:14822570..14824766-chr20:14826157..14827975,2	MCF-7	breast:
47	chr20:14803482..14806391-chr20:14809700..14811931,2	MCF-7	breast:
48	chr20:14862084..14865220-chr20:14867174..14871364,3	MCF-7	breast:
49	chr20:14892181..14894488-chr20:14900218..14901785,2	MCF-7	breast:
50	chr20:14825814..14826804-chr20:14859521..14860363,2	MCF-7	breast:

(count:26 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-C20orf7-3	chr20:14830550-14831152	NONHSAT078716
2	lnc-FLRT3-1	chr20:14868742-14868950	NONHSAT078721
3	lnc-FLRT3-1	chr20:14910021-14910164	NR_110318
4	lnc-FLRT3-1	chr20:14885587-14886675	ENSG00000235914.1
5	lnc-C20orf7-3	chr20:14830550-14830649	NONHSAT078714
6	lnc-FLRT3-1	chr20:14868742-14868950	ENSG00000235914.1
7	lnc-FLRT3-1	chr20:14910021-14910132	ENSG00000235914.1
8	lnc-FLRT3-1	chr20:14910021-14910161	ENSG00000235914.1
9	lnc-FLRT3-1	chr20:14885587-14886675	NR_072988
10	lnc-FLRT3-1	chr20:14864899-14865240	ENSG00000235914.1
11	lnc-FLRT3-1	chr20:14910021-14910164	NR_037841
12	lnc-FLRT3-2	chr20:14915884-14916009	ENSG00000237832.1
13	lnc-FLRT3-2	chr20:14914489-14914588	ENSG00000237832.1
14	lnc-FLRT3-1	chr20:14864896-14865240	NONHSAT078721
15	lnc-FLRT3-4	chr20:14812896-14813240	ucscGeneNc_uc002woy_1
16	lnc-FLRT3-1	chr20:14910021-14910154	NONHSAT078722
17	lnc-FLRT3-1	chr20:14864898-14865240	NONHSAT078722
18	lnc-FLRT3-2	chr20:14915576-14915720	ENSG00000237832.1
19	lnc-C20orf7-3	chr20:14868789-14869314	NONHSAT078714
20	lnc-FLRT3-1	chr20:14910021-14910142	NONHSAT078721
21	lnc-FLRT3-1	chr20:14868742-14868950	NR_037841
22	lnc-FLRT3-4	chr20:14858021-14858161	ucscGeneNc_uc002woy_1
23	lnc-FLRT3-1	chr20:14864899-14865240	NR_110318
24	lnc-FLRT3-1	chr20:14910021-14910164	NR_072988
25	lnc-FLRT3-4	chr20:14816742-14816950	ucscGeneNc_uc002woy_1
26	lnc-FLRT3-1	chr20:14864899-14865240	NR_037841

No data

Variant related genes	Relation type
MACROD2-AS1	TF binding region
ENSG00000237832	TF binding region
MACROD2-AS1	CpG island
ENSG00000237832	CpG island
ENSG00000237832	chromatin interactions

Extended variants
information (count: 5859 )
Associated
traits (count: 75 )

Variant overlapped rSNPs/rCNVs (count:5859 , 50 per page) page: 1 2 3 4 5 6 7 ... 118

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs567898976	chr20:14750661-14750662	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
2	rs577690675	chr20:14750726-14750727	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs567482046	chr20:14750731-14750732	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs145646608	chr20:14750759-14750760	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs370030703	chr20:14750839-14750840	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs538793509	chr20:14750850-14750851	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs200633499	chr20:14750893-14750894	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs557202223	chr20:14750937-14750938	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs542022364	chr20:14750965-14750966	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs115373342	chr20:14750966-14750967	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs542990467	chr20:14750995-14750996	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs191842831	chr20:14751010-14751011	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs561314309	chr20:14751063-14751064	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs182538595	chr20:14751104-14751105	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs187595769	chr20:14751155-14751156	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs572628754	chr20:14751192-14751193	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs115835982	chr20:14751216-14751217	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs532471596	chr20:14751220-14751221	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs529755282	chr20:14751240-14751241	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs562779696	chr20:14751244-14751245	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs147533839	chr20:14751267-14751268	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs192703346	chr20:14751288-14751289	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs567170353	chr20:14751289-14751290	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs373916188	chr20:14751334-14751335	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs185707711	chr20:14751335-14751336	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs376038428	chr20:14751379-14751380	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs546261487	chr20:14751381-14751382	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs138342180	chr20:14751446-14751447	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs537216299	chr20:14751450-14751451	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs58035449	chr20:14751497-14751498	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
31	rs538239333	chr20:14751499-14751500	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs115545001	chr20:14751521-14751522	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs190567191	chr20:14751532-14751533	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs554532841	chr20:14751544-14751545	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs573113351	chr20:14751624-14751625	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs377215378	chr20:14751675-14751676	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs569052867	chr20:14751699-14751700	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs540213342	chr20:14751794-14751795	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs143813731	chr20:14751799-14751800	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs386812724	chr20:14751819-14751820	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs544330086	chr20:14751838-14751839	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs564127212	chr20:14751842-14751843	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs148919469	chr20:14751845-14751846	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs192209698	chr20:14751893-14751894	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs143659567	chr20:14751929-14751930	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs530198937	chr20:14751938-14751939	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs542433149	chr20:14751942-14751943	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs150650357	chr20:14751943-14751944	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs112669075	chr20:14751947-14751948	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs77685281	chr20:14751958-14751959	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:75)

Disease	PMID	Source
Breast cancer	16397240	CNVD
abortions and stillbirths	19751515	CNVD
Wilms tumour	21544195	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Breast cancer	16272173	CNVD
Melanoma	18172304	CNVD
Cancer	21637783	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Ewing''s sarcoma	21437220	CNVD
Oral cancer	19627613	CNVD
colon cancer	17210682	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Glioblastoma multiforme	21080181	CNVD
Thyroid cancer	19087340	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Cancer	16751803	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Colorectal cancer	19359472	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Human rectal carcinomas	16397240	CNVD
Olfactory neuroblastoma	18408657	CNVD
Central neurocytomas	17123091	CNVD
Colorectal cancer	16272173	CNVD
Medulloblastoma	21979893	CNVD
Gastric cancer	17908304	CNVD
Urothelial carcinoma	21177765	CNVD
Acute myeloid leukemia	20729466	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Ewing''s sarcoma	17952124	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Colorectal cancer	21645411	CNVD
small cell lung cancer	20016488	CNVD
Lung cancer	18438408	CNVD
Autism	22495311	CNVD
Glaucoma	21310917	CNVD
Alagille syndrome	22470819	CNVD
Lung cancer	16773561	CNVD
Renal cell carcinoma	18765545	CNVD
Alagille syndrome	17576883	CNVD
Anaplastic large cell lymphoma	18179710	CNVD
Prostate cancer	18632612	CNVD
Ewing''s sarcoma	18628472	CNVD
Glioblastoma multiforme	18628472	CNVD
Leukemia	18628472	CNVD
Myelofibrosis	22110671	CNVD
Kabuki syndrome	21720541	CNVD
Glioblastoma multiforme	22286061	CNVD
High-grade prostatic intraepithelial neoplasia	16573809	CNVD
Neurocytoma	17123091	CNVD
Glioblastoma multiforme	21138945	CNVD
Cancer	20164919	CNVD
Multiple sclerosis	20663923	CNVD
Schizophrenia	20663923	CNVD
brain infarct	20663923	CNVD
Breast cancer	22522925	CNVD
Breast cancer	17142309	CNVD
Cancer	20164920	CNVD
Schizophrenia	23813976	CNVD
Esophageal adenocarcinoma	18519675	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD
Autism	20531469	CNVD
Breast cancer	21364760	CNVD
Schizophrenia	20967226	CNVD
Williams Syndrome	20824207	CNVD
Melanoma	17363583	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD
Acute lymphoblastic leukemia	18458336	CNVD
Non-syndromic sensorineural hearing loss	21987784	CNVD
early-passage human iPS cells	21368824	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Congenital anomalies of the kidney and urinary tract	18316590	CNVD
Cancer	21272361	CNVD

Chromatin state (count:962 , 50 per page) page: 1 2 3 4 5 6 7 ... 20

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr20:14750600-14756200	Weak transcription	Psoas Muscle	Psoas
2	chr20:14755800-14757200	Enhancers	Skeletal Muscle Female	skeletal muscle
3	chr20:14756000-14756400	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
4	chr20:14756000-14756400	Enhancers	Skeletal Muscle Male	skeletal muscle
5	chr20:14756000-14756800	Enhancers	Rectal Mucosa Donor 31	rectum
6	chr20:14756000-14756800	Enhancers	Hela-S3	cervix
7	chr20:14756000-14757000	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
8	chr20:14756000-14757200	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
9	chr20:14756000-14757200	Enhancers	A549	lung
10	chr20:14756000-14759200	Enhancers	Muscle Satellite Cultured Cells	--
11	chr20:14756200-14756800	Enhancers	Psoas Muscle	Psoas
12	chr20:14756200-14757000	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
13	chr20:14756200-14757000	Enhancers	HepG2	liver
14	chr20:14756200-14757000	Enhancers	HMEC	breast
15	chr20:14756200-14757200	Enhancers	NHEK	skin
16	chr20:14756600-14757000	Enhancers	Fetal Intestine Small	intestine
17	chr20:14756600-14757200	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
18	chr20:14756800-14757000	Enhancers	NHDF-Ad	bronchial
19	chr20:14757000-14758000	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
20	chr20:14757000-14758000	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
21	chr20:14757000-14758200	Weak transcription	HMEC	breast
22	chr20:14757200-14757600	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
23	chr20:14757200-14757600	Weak transcription	NHEK	skin
24	chr20:14757200-14758000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
25	chr20:14757600-14759000	Enhancers	NHEK	skin
26	chr20:14757600-14759600	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
27	chr20:14758000-14758600	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
28	chr20:14758000-14758800	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
29	chr20:14758000-14759200	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
30	chr20:14758200-14758800	Enhancers	HMEC	breast
31	chr20:14758600-14758800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
32	chr20:14758600-14759400	Enhancers	NHDF-Ad	bronchial
33	chr20:14758600-14761200	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
34	chr20:14759200-14760800	Weak transcription	Muscle Satellite Cultured Cells	--
35	chr20:14759200-14760800	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
36	chr20:14760600-14761600	Enhancers	HUVEC	blood vessel
37	chr20:14760800-14761800	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
38	chr20:14760800-14762200	Enhancers	Muscle Satellite Cultured Cells	--
39	chr20:14761200-14761800	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
40	chr20:14763200-14763800	Enhancers	HUES48 Cell Line	embryonic stem cell
41	chr20:14763200-14764000	Enhancers	iPS-18 Cell Line	embryonic stem cell
42	chr20:14763400-14763800	Enhancers	HUES6 Cell Line	embryonic stem cell
43	chr20:14763400-14764200	Enhancers	HUES64 Cell Line	embryonic stem cell
44	chr20:14764200-14764800	Weak transcription	HUES64 Cell Line	embryonic stem cell
45	chr20:14764800-14765000	Enhancers	HUES64 Cell Line	embryonic stem cell
46	chr20:14764800-14765200	Enhancers	Fetal Lung	lung
47	chr20:14765200-14765600	Weak transcription	Fetal Lung	lung
48	chr20:14765600-14766000	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
49	chr20:14765600-14766200	Enhancers	Fetal Lung	lung
50	chr20:14765600-14766400	Enhancers	Stomach Mucosa	stomach

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links