Variant report

Variant nsv544206
Chromosome Location chr20:14964258-15547739
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:1412 , 50 per page) page: 1 2 3 4 5 6 7 ... 29
No. Chromosome Location Chromatin state Cell line Tissue
1 chr20:14960600-14965400 Weak transcription Rectal Mucosa Donor 31 rectum
2 chr20:14960800-14965400 Weak transcription Hela-S3 cervix
3 chr20:14961000-14964800 Weak transcription HUVEC blood vessel
4 chr20:14962000-14965000 ZNF genes & repeats Fetal Intestine Small intestine
5 chr20:14963600-14965800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
6 chr20:14964000-14964400 Enhancers HepG2 liver
7 chr20:14964200-14964600 ZNF genes & repeats Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
8 chr20:14964400-14964600 ZNF genes & repeats A549 lung
9 chr20:14964400-14964600 Flanking Active TSS HepG2 liver
10 chr20:14964600-14965200 Weak transcription A549 lung
11 chr20:14964600-14965200 Enhancers HepG2 liver
12 chr20:14964600-14966800 Enhancers Fetal Intestine Large intestine
13 chr20:14964600-14971600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
14 chr20:14964800-14967800 Enhancers HUVEC blood vessel
15 chr20:14965000-14965200 Weak transcription Fetal Intestine Small intestine
16 chr20:14965000-14965600 Enhancers Stomach Mucosa stomach
17 chr20:14965000-14968000 Enhancers Liver Liver
18 chr20:14965200-14965600 Enhancers A549 lung
19 chr20:14965200-14965800 Flanking Active TSS HepG2 liver
20 chr20:14965200-14966000 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
21 chr20:14965200-14967200 Enhancers Fetal Intestine Small intestine
22 chr20:14965400-14966000 Enhancers Duodenum Mucosa Duodenum
23 chr20:14965400-14966800 Enhancers Fetal Adrenal Gland Adrenal Gland
24 chr20:14965400-14967400 Enhancers Rectal Mucosa Donor 31 rectum
25 chr20:14965400-14967600 Enhancers Pancreas Pancrea
26 chr20:14965400-14968000 Enhancers Fetal Kidney kidney
27 chr20:14965400-14968000 Enhancers Hela-S3 cervix
28 chr20:14965600-14966000 Flanking Active TSS Stomach Mucosa stomach
29 chr20:14965600-14966200 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
30 chr20:14965600-14966200 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
31 chr20:14965600-14966200 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
32 chr20:14965600-14966200 Enhancers Sigmoid Colon Sigmoid Colon
33 chr20:14965600-14966200 Flanking Active TSS A549 lung
34 chr20:14965600-14966400 Enhancers Rectal Mucosa Donor 29 rectum
35 chr20:14965800-14966200 Enhancers HepG2 liver
36 chr20:14965800-14966600 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
37 chr20:14965800-14967200 Enhancers Pancreatic Islets Pancreatic Islet
38 chr20:14966000-14966200 Enhancers Stomach Mucosa stomach
39 chr20:14966000-14966400 Enhancers Aorta Aorta
40 chr20:14966000-14967200 Weak transcription Duodenum Mucosa Duodenum
41 chr20:14966000-14967400 Enhancers HMEC breast
42 chr20:14966200-14966600 Enhancers A549 lung
43 chr20:14966200-14966800 Flanking Active TSS HepG2 liver
44 chr20:14966200-14967400 Weak transcription Stomach Mucosa stomach
45 chr20:14966400-14967000 Weak transcription Rectal Mucosa Donor 29 rectum
46 chr20:14966600-14966800 Flanking Active TSS A549 lung
47 chr20:14966600-14967000 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
48 chr20:14966600-14967000 Enhancers Aorta Aorta
49 chr20:14966600-14967400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
50 chr20:14966800-14967200 Active TSS A549 lung

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