Variant report
Variant | nsv544234 |
---|---|
Chromosome Location | chr20:29877877-30020310 |
allele | n/a |
Outlinks | Ensembl   UCSC |
- TF binding region (count:624)
- CpG islands (count:1527)
- Chromatin interactive region (count:24)
- LncRNA region (count:18)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No. | Transcrition factor | Chromosome Location | Cell Line | Cell type | Cell Stage | Matched TF binding sites |
---|---|---|---|---|---|---|
1 | ARID3A | chr20:29901133-29901495 | HepG2 | liver: | n/a | n/a |
2 | ARID3A | chr20:30001402-30001664 | HepG2 | liver: | n/a | n/a |
3 | ATF1 | chr20:29901261-29901460 | K562 | blood: | n/a | n/a |
4 | CEBPB | chr20:30013786-30013875 | HepG2 | liver: | n/a | chr20:30013846-30013859 chr20:30013846-30013857 |
5 | CEBPB | chr20:29970579-29970843 | HepG2 | liver: | n/a | chr20:29970692-29970701 chr20:29970692-29970703 |
6 | CEBPB | chr20:29939648-29939720 | HepG2 | liver: | n/a | chr20:29939667-29939678 |
7 | CEBPB | chr20:29929475-29929483 | K562 | blood: | n/a | n/a |
8 | CEBPB | chr20:29886470-29886721 | A549 | lung: | n/a | chr20:29886585-29886596 |
9 | CEBPB | chr20:29970567-29970830 | A549 | lung: | n/a | chr20:29970692-29970701 chr20:29970692-29970703 |
10 | CEBPB | chr20:29930995-29931186 | HepG2 | liver: | n/a | chr20:29931087-29931098 |
11 | CEBPB | chr20:30016863-30016945 | HepG2 | liver: | n/a | chr20:30016923-30016934 |
12 | CEBPB | chr20:29929046-29929296 | Hela-S3 | cervix: | n/a | n/a |
13 | CEBPB | chr20:29926865-29926997 | HepG2 | liver: | n/a | n/a |
14 | CEBPB | chr20:29891404-29891489 | IMR90 | lung: | n/a | chr20:29891449-29891460 |
15 | CEBPB | chr20:29891290-29891604 | HepG2 | liver: | n/a | chr20:29891449-29891460 |
16 | CEBPB | chr20:29901179-29901489 | IMR90 | lung: | n/a | n/a |
17 | CEBPB | chr20:29901113-29901610 | MCF-7 | breast: | n/a | n/a |
18 | CEBPB | chr20:29901178-29901527 | HepG2 | liver: | n/a | n/a |
19 | CEBPB | chr20:29886446-29886770 | HepG2 | liver: | n/a | chr20:29886585-29886596 |
20 | CEBPB | chr20:29886588-29886598 | H1-hESC | embryonic stem cell: | n/a | n/a |
21 | CHD2 | chr20:29952083-29952448 | K562 | blood: | n/a | n/a |
22 | CHD2 | chr20:29952144-29952438 | HepG2 | liver: | n/a | n/a |
23 | CTCF | chr20:30001465-30001595 | MCF-7 | breast: | n/a | n/a |
24 | CTCF | chr20:30001520-30001670 | GM12878 | blood: | n/a | n/a |
25 | CTCF | chr20:29900942-29901089 | Hela-S3 | cervix: | n/a | n/a |
26 | CTCF | chr20:30001440-30001590 | Caco-2 | colon: | n/a | n/a |
27 | CTCF | chr20:30001500-30001650 | Hela-S3 | cervix: | n/a | n/a |
28 | CTCF | chr20:30001440-30001590 | HVMF | connective: | n/a | n/a |
29 | CTCF | chr20:30001460-30001610 | AG10803 | skin: | n/a | n/a |
30 | CTCF | chr20:30001480-30001630 | HMF | breast: | n/a | n/a |
31 | CTCF | chr20:29901240-29901390 | GM12872 | blood: | n/a | chr20:29901352-29901373 chr20:29901332-29901353 chr20:29901350-29901368 |
32 | CTCF | chr20:30001299-30001675 | HepG2 | liver: | n/a | n/a |
33 | CTCF | chr20:29900980-29901130 | HPAF | blood vessel: | n/a | n/a |
34 | CTCF | chr20:29901300-29901450 | HUVEC | blood vessel: | n/a | chr20:29901352-29901373 chr20:29901332-29901353 chr20:29901350-29901368 |
35 | CTCF | chr20:29901320-29901470 | AG09319 | gingival: | n/a | chr20:29901352-29901373 chr20:29901332-29901353 chr20:29901350-29901368 |
36 | CTCF | chr20:29900948-29901480 | Medullo | brain: | n/a | chr20:29901352-29901373 chr20:29901332-29901353 chr20:29901350-29901368 |
37 | CTCF | chr20:29901260-29901410 | Caco-2 | colon: | n/a | chr20:29901352-29901373 chr20:29901332-29901353 chr20:29901350-29901368 |
38 | CTCF | chr20:30001367-30001655 | GM12878 | blood: | n/a | n/a |
39 | CTCF | chr20:30001420-30001570 | HAc | cerebellar: | n/a | n/a |
40 | CTCF | chr20:29901300-29901450 | AoAF | blood vessel: | n/a | chr20:29901352-29901373 chr20:29901332-29901353 chr20:29901350-29901368 |
41 | CTCF | chr20:30001260-30001410 | HRE | kidney: | n/a | n/a |
42 | CTCF | chr20:29901280-29901430 | BE2_C | brain: | n/a | chr20:29901352-29901373 chr20:29901332-29901353 chr20:29901350-29901368 |
43 | CTCF | chr20:30001420-30001624 | SK-N-SH_RA | brain: | n/a | n/a |
44 | CTCF | chr20:29901280-29901430 | GM12867 | blood: | n/a | chr20:29901352-29901373 chr20:29901332-29901353 chr20:29901350-29901368 |
45 | CTCF | chr20:30001457-30001614 | Medullo | brain: | n/a | n/a |
46 | CTCF | chr20:30001460-30001610 | HL-60 | blood: | n/a | n/a |
47 | CTCF | chr20:30001458-30001611 | GM10266 | blood: | n/a | n/a |
48 | CTCF | chr20:29901192-29901521 | A549 | lung: | n/a | chr20:29901352-29901373 chr20:29901332-29901353 chr20:29901350-29901368 |
49 | CTCF | chr20:29901240-29901390 | GM12864 | blood: | n/a | chr20:29901352-29901373 chr20:29901332-29901353 chr20:29901350-29901368 |
50 | CTCF | chr20:30001386-30001703 | IMR90 | lung: | n/a | n/a |
No. | Chromosome Location | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr20:29994089-29994139 | Jurkat | blood: | n/a |
2 | chr20:29978114-29978164 | Hela-S3 | cervix: | n/a |
3 | chr20:29994089-29994139 | Jurkat | blood: | n/a |
4 | chr20:29978114-29978164 | Hela-S3 | cervix: | n/a |
5 | chr20:30012193-30012243 | HEEpiC | esophagus: | n/a |
6 | chr20:29896456-29896506 | HIPEpiC | eye: | n/a |
7 | chr20:29956585-29956635 | A549 | lung: | n/a |
8 | chr20:29960982-29961032 | MCF10A-Er-Src | breast: | n/a |
9 | chr20:29995343-29995393 | NT2-D1 | testis: | n/a |
10 | chr20:30008986-30009036 | ProgFib | skin: | n/a |
11 | chr20:29995343-29995393 | HUVEC | blood vessel: | n/a |
12 | chr20:29993663-29993713 | Hela-S3 | cervix: | n/a |
13 | chr20:29994089-29994139 | SAEC | small airway: | n/a |
14 | chr20:29960982-29961032 | RPTEC | kidney: | n/a |
15 | chr20:29994173-29994223 | GM19239 | blood: | n/a |
16 | chr20:29896456-29896506 | HNPCEpiC | eye: | n/a |
17 | chr20:29994173-29994223 | AG04450 | lung: | fetal |
18 | chr20:30008986-30009036 | HRCEpiC | kidney: | n/a |
19 | chr20:29956062-29956112 | AG09309 | skin: | n/a |
20 | chr20:30008986-30009036 | A549 | lung: | n/a |
21 | chr20:29994846-29994896 | HUVEC | blood vessel: | n/a |
22 | chr20:30008142-30008192 | SKMC | muscle: | n/a |
23 | chr20:29955259-29955309 | NHBE | bronchial: | n/a |
24 | chr20:29896928-29896978 | Hepatocyte | liver: | n/a |
25 | chr20:29978114-29978164 | A549 | lung: | n/a |
26 | chr20:29979846-29979896 | GM19239 | blood: | n/a |
27 | chr20:29956028-29956078 | NB4 | blood: | n/a |
28 | chr20:29995343-29995393 | Caco-2 | colon: | n/a |
29 | chr20:29960982-29961032 | HIPEpiC | eye: | n/a |
30 | chr20:29965177-29965227 | AG09309 | skin: | n/a |
31 | chr20:29965177-29965227 | ProgFib | skin: | n/a |
32 | chr20:29896928-29896978 | GM12891 | blood: | n/a |
33 | chr20:29978114-29978164 | HepG2 | liver: | n/a |
34 | chr20:29995343-29995393 | LNCaP | prostate: | n/a |
35 | chr20:29978114-29978164 | HAEpiC | amniotic membrane: | n/a |
36 | chr20:29995343-29995393 | Hela-S3 | cervix: | n/a |
37 | chr20:29956585-29956635 | BJ | skin: | n/a |
38 | chr20:29994173-29994223 | HMEC | breast: | n/a |
39 | chr20:29896479-29896529 | BJ | skin: | n/a |
40 | chr20:29956028-29956078 | GM12891 | blood: | n/a |
41 | chr20:29956330-29956380 | PFSK-1 | brain: | n/a |
42 | chr20:30008142-30008192 | HCF | heart: | n/a |
43 | chr20:30008142-30008192 | NB4 | blood: | n/a |
44 | chr20:29896479-29896529 | AG09319 | gingival: | n/a |
45 | chr20:29956330-29956380 | ovcar-3 | ovarian: | n/a |
46 | chr20:29993663-29993713 | HAEpiC | amniotic membrane: | n/a |
47 | chr20:29965177-29965227 | AG10803 | skin: | n/a |
48 | chr20:29956585-29956635 | NHBE | bronchial: | n/a |
49 | chr20:29978176-29978226 | HNPCEpiC | eye: | n/a |
50 | chr20:30007925-30007975 | SK-N-SH_RA | brain: | n/a |
(count:24 , 50 per page) page:
1
No. | Distal block | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr20:30001098..30001991-chr20:30090702..30091623,2 | MCF-7 | breast: | |
2 | chr20:29874751..29877240-chr20:29903779..29906129,2 | K562 | blood: | |
3 | chr20:29984307..29986959-chr20:29988552..29991737,3 | K562 | blood: | |
4 | chr20:30001102..30001956-chr20:30200407..30201209,2 | MCF-7 | breast: | |
5 | chr20:29940769..29942399-chr20:29945457..29948097,2 | MCF-7 | breast: | |
6 | chr20:29900827..29901742-chr20:30090593..30091579,4 | MCF-7 | breast: | |
7 | chr20:29905971..29908391-chr20:29910613..29913391,2 | K562 | blood: | |
8 | chr20:30001115..30001627-chr20:30090661..30091593,2 | MCF-7 | breast: | |
9 | chr20:29992014..29994023-chr20:30071484..30073415,2 | K562 | blood: | |
10 | chr20:29900754..29901422-chr20:30042008..30042651,2 | MCF-7 | breast: | |
11 | chr20:30006873..30009795-chr20:30012384..30014922,2 | MCF-7 | breast: | |
12 | chr20:29933564..29935935-chr20:29935958..29938008,2 | MCF-7 | breast: | |
13 | chr20:29955069..29955719-chr20:29963915..29964847,2 | MCF-7 | breast: | |
14 | chr20:30001111..30001772-chr20:30200396..30200937,2 | MCF-7 | breast: | |
15 | chr20:29960399..29962900-chr20:29964371..29965877,2 | MCF-7 | breast: | |
16 | chr20:29984307..29986959-chr20:29988552..29991737,3 | K562 | blood: | |
17 | chr20:29900644..29901274-chr20:30041865..30042847,4 | MCF-7 | breast: | |
18 | chr20:29905971..29908391-chr20:29910613..29913391,2 | K562 | blood: | |
19 | chr20:30006873..30009795-chr20:30012384..30014922,2 | MCF-7 | breast: | |
20 | chr20:29976860..29979727-chr20:29989751..29991908,2 | MCF-7 | breast: | |
21 | chr20:29933564..29935935-chr20:29935958..29938008,2 | MCF-7 | breast: | |
22 | chr20:29940769..29942399-chr20:29945457..29948097,2 | MCF-7 | breast: | |
23 | chr20:29960399..29962900-chr20:29964371..29965877,2 | MCF-7 | breast: | |
24 | chr20:29962541..29965456-chr20:29970473..29972766,2 | K562 | blood: |
(count:18 , 50 per page) page:
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No. | lncRNA name | Chromosome Location | lncRNA alias |
---|---|---|---|
1 | lnc-DEFB121-1 | chr20:30011613-30011670 | NONHSAT079292 |
2 | lnc-DEFB121-1 | chr20:30009242-30009481 | NONHSAT079292 |
3 | lnc-DEFB119-2 | chr20:29929174-29929962 | NONHSAT079285 |
4 | lnc-DEFB116-4 | chr20:29899691-29899765 | NONHSAT079284 |
5 | lnc-DEFB119-1 | chr20:29966155-29966194 | NONHSAT079289 |
6 | lnc-DEFB119-1 | chr20:29964966-29965242 | NR_073153 |
7 | lnc-DEFB119-1 | chr20:29978226-29978452 | NR_073153 |
8 | lnc-DEFB119-1 | chr20:29976126-29976162 | NONHSAT079289 |
9 | lnc-DEFB119-1 | chr20:29964966-29965242 | NONHSAT079289 |
10 | lnc-DEFB119-2 | chr20:29930249-29931017 | NONHSAT079285 |
11 | lnc-DEFB119-1 | chr20:29966155-29966194 | NR_073153 |
12 | lnc-DEFB119-1 | chr20:29978226-29978452 | NONHSAT079289 |
13 | lnc-DEFB119-2 | chr20:29931511-29932274 | NONHSAT079285 |
14 | lnc-DEFB116-4 | chr20:29899106-29899362 | NONHSAT079284 |
15 | lnc-DEFB119-1 | chr20:29976126-29976162 | NONHSAT079290 |
16 | lnc-DEFB119-1 | chr20:29978226-29978452 | NONHSAT079290 |
17 | lnc-DEFB119-2 | chr20:29931121-29931202 | NONHSAT079285 |
18 | lnc-DEFB119-1 | chr20:29964966-29965165 | NONHSAT079290 |
No data |
No data |
Variant related genes | Relation type |
---|---|
HAUS6P2 | TF binding region |
DEFB119 | TF binding region |
RPL31P3 | TF binding region |
DEFB116 | TF binding region |
ENSG00000212134 | TF binding region |
DEFB118 | TF binding region |
DEFB122 | TF binding region |
RNA5SP480 | TF binding region |
ENSG00000224628 | TF binding region |
DEFB121 | TF binding region |
DEFB117 | TF binding region |
HAUS6P2 | CpG island |
DEFB119 | CpG island |
RPL31P3 | CpG island |
DEFB116 | CpG island |
ENSG00000212134 | CpG island |
DEFB118 | CpG island |
DEFB122 | CpG island |
RNA5SP480 | CpG island |
ENSG00000224628 | CpG island |
DEFB121 | CpG island |
DEFB117 | CpG island |
ENSG00000212134 | chromatin interactions |
ENSG00000180483 | chromatin interactions |
No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | rs567040481 | chr20:29896479-29896480 | Inactive region | CpG island | 1 gene(s) | Overlapped CNVs | n/a |
2 | rs114153561 | chr20:29896480-29896481 | Inactive region | CpG island | 1 gene(s) | Overlapped CNVs | n/a |
3 | rs552662348 | chr20:29896507-29896508 | Inactive region | CpG island | 1 gene(s) | Overlapped CNVs | n/a |
4 | rs145509874 | chr20:29896511-29896512 | Inactive region | CpG island | 1 gene(s) | Overlapped CNVs | n/a |
5 | rs572248634 | chr20:29897203-29897204 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
6 | rs367847596 | chr20:29897217-29897218 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
7 | rs376217953 | chr20:29897236-29897237 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
8 | rs553795153 | chr20:29899076-29899077 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
9 | rs556897603 | chr20:29899118-29899119 | Inactive region | TF binding regionlncRNA | 1 gene(s) | Overlapped CNVs | n/a |
10 | rs376149753 | chr20:29899129-29899130 | Inactive region | TF binding regionlncRNA | 1 gene(s) | Overlapped CNVs | n/a |
11 | rs544394686 | chr20:29899137-29899138 | Inactive region | TF binding regionlncRNA | 1 gene(s) | Overlapped CNVs | n/a |
12 | rs570265462 | chr20:29899150-29899151 | Inactive region | TF binding regionlncRNA | 1 gene(s) | Overlapped CNVs | n/a |
13 | rs370088618 | chr20:29899158-29899159 | Inactive region | TF binding regionlncRNA | 1 gene(s) | Overlapped CNVs | n/a |
14 | rs571966124 | chr20:29899163-29899164 | Inactive region | TF binding regionlncRNA | 1 gene(s) | Overlapped CNVs | n/a |
15 | rs555684127 | chr20:29899189-29899190 | Inactive region | TF binding regionlncRNA | 1 gene(s) | Overlapped CNVs | n/a |
16 | rs4911555 | chr20:29899208-29899209 | Inactive region | TF binding regionlncRNA | 1 gene(s) | LD-proxies of rSNPOverlapped rCNV | n/a |
17 | rs117394984 | chr20:29899223-29899224 | Inactive region | lncRNA | n/a | Overlapped CNVs | n/a |
18 | rs557876204 | chr20:29899235-29899236 | Inactive region | lncRNA | n/a | Overlapped CNVs | n/a |
19 | rs373371852 | chr20:29899319-29899320 | Inactive region | lncRNA | n/a | Overlapped CNVs | n/a |
20 | rs543486392 | chr20:29899341-29899342 | Inactive region | lncRNA | n/a | Overlapped CNVs | n/a |
21 | rs576173305 | chr20:29899344-29899345 | Inactive region | lncRNA | n/a | Overlapped CNVs | n/a |
22 | rs576921002 | chr20:29899717-29899718 | Inactive region | lncRNA | n/a | Overlapped CNVs | n/a |
23 | rs148614732 | chr20:29899718-29899719 | Inactive region | lncRNA | n/a | Overlapped CNVs | n/a |
24 | rs186872895 | chr20:29899729-29899730 | Inactive region | lncRNA | n/a | Overlapped CNVs | n/a |
25 | rs557915052 | chr20:29899730-29899731 | Inactive region | lncRNA | n/a | Overlapped CNVs | n/a |
26 | rs6061207 | chr20:29899742-29899743 | Inactive region | lncRNA | n/a | LD-proxies of rSNPOverlapped rCNV | n/a |
27 | rs140395026 | chr20:29900620-29900621 | Inactive region | TF binding region | 2 gene(s) | Overlapped CNVs | n/a |
28 | rs374946428 | chr20:29900663-29900664 | Inactive region | TF binding region | 2 gene(s) | Overlapped CNVs | n/a |
29 | rs531161722 | chr20:29900693-29900694 | Inactive region | TF binding region | 2 gene(s) | Overlapped CNVs | n/a |
30 | rs560447555 | chr20:29900695-29900696 | Inactive region | TF binding region | 2 gene(s) | Overlapped CNVs | n/a |
31 | rs573877321 | chr20:29900703-29900704 | Inactive region | TF binding region | 2 gene(s) | Overlapped CNVs | n/a |
32 | rs534157897 | chr20:29900762-29900763 | Inactive region | TF binding region | 2 gene(s) | Overlapped CNVs | n/a |
33 | rs71336537 | chr20:29900796-29900797 | Inactive region | TF binding region | 2 gene(s) | Overlapped CNVs | n/a |
34 | rs536210451 | chr20:29900803-29900804 | Inactive region | TF binding region | 2 gene(s) | Overlapped CNVs | n/a |
35 | rs536700819 | chr20:29900865-29900866 | Inactive region | TF binding region | 2 gene(s) | Overlapped CNVs | n/a |
36 | rs553428286 | chr20:29900900-29900901 | Inactive region | TF binding region | 2 gene(s) | Overlapped CNVs | n/a |
37 | rs11700052 | chr20:29900925-29900926 | Inactive region | TF binding region | 2 gene(s) | Overlapped CNVs | n/a |
38 | rs566840422 | chr20:29900929-29900930 | Inactive region | TF binding region | 2 gene(s) | Overlapped CNVs | n/a |
39 | rs539021182 | chr20:29900932-29900933 | Inactive region | TF binding region | 2 gene(s) | Overlapped CNVs | n/a |
40 | rs144115480 | chr20:29900943-29900944 | Inactive region | TF binding region | 2 gene(s) | Overlapped CNVs | n/a |
41 | rs367704152 | chr20:29901029-29901030 | Active TSS | TF binding region | 2 gene(s) | Overlapped CNVs | n/a |
42 | rs112499575 | chr20:29901037-29901038 | Active TSS | TF binding region | 2 gene(s) | Overlapped CNVs | n/a |
43 | rs36000803 | chr20:29901074-29901075 | Active TSS | TF binding region | 2 gene(s) | Overlapped CNVs | n/a |
44 | rs575446482 | chr20:29901087-29901088 | Active TSS | TF binding region | 2 gene(s) | Overlapped CNVs | n/a |
45 | rs397779197 | chr20:29901090-29901091 | Active TSS | TF binding region | 2 gene(s) | Overlapped CNVs | n/a |
46 | rs116758474 | chr20:29901091-29901092 | Active TSS | TF binding region | 2 gene(s) | Overlapped CNVs | n/a |
47 | rs28448310 | chr20:29901120-29901121 | Active TSS | TF binding region | 2 gene(s) | Overlapped CNVs | n/a |
48 | rs57214825 | chr20:29901125-29901126 | Active TSS | TF binding region | 2 gene(s) | LD-proxies of rSNPOverlapped rCNV | n/a |
49 | rs74183446 | chr20:29901127-29901128 | Active TSS | TF binding region | 2 gene(s) | Overlapped CNVs | n/a |
50 | rs146480535 | chr20:29901128-29901129 | Active TSS | TF binding region | 2 gene(s) | Overlapped CNVs | n/a |
Disease | PMID | Source |
---|---|---|
Gastric cancer | 17908304 | CNVD |
Ewing''s sarcoma | 21437220 | CNVD |
Glioblastoma multiforme | 21080181 | CNVD |
Esophageal squamous carcinoma | 21637470 | CNVD |
Medulloblastoma | 21979893 | CNVD |
Urothelial carcinoma | 21177765 | CNVD |
Acute myeloid leukemia | 20729466 | CNVD |
T-cell prolymphocytic leukemia | 19278963 | CNVD |
Ewing''s sarcoma | 17952124 | CNVD |
Hodgkin''s lymphoma | 17606441 | CNVD |
Thoracic aortic aneurysm | 21092924 | CNVD |
Colorectal cancer | 21645411 | CNVD |
Autism | 22495311 | CNVD |
Anaplastic large cell lymphoma | 18179710 | CNVD |
T-cell prolymphocytic leukemia | 17713554 | CNVD |
Pancreatic endocrine tumor | 17639061 | CNVD |
Chordoma | 18071362 | CNVD |
Basal cell lymphoma | 16317097 | CNVD |
Diffuse large b-cell lymphoma | 16317097 | CNVD |
Acute myeloid leukemia | 16864856 | CNVD |
Breast cancer | 21806811 | CNVD |
Melanoma | 21693616 | CNVD |
Astrocytoma | 17387387 | CNVD |
Endometrial cancer | 22040021 | CNVD |
Glioblastoma multiforme | 19960244 | CNVD |
Glioblastoma multiforme | 17387387 | CNVD |
Hepatocellular carcinoma | 22174799 | CNVD |
colon cancer | 17210682 | CNVD |
Colorectal cancer | 20709793 | CNVD |
Breast cancer | 22028636 | CNVD |
Breast cancer | 21264507 | CNVD |
Thyroid cancer | 19087340 | CNVD |
Myeloproliferative neoplasm | 20015882 | CNVD |
Soft tissue tumor | 16732325 | CNVD |
Colorectal cancer | 19359472 | CNVD |
Gastric cancer | 17167181 | CNVD |
Myeloproliferative neoplasm | 19047681 | CNVD |
Breast cancer | 17899364 | CNVD |
Colorectal cancer | 16272173 | CNVD |
Human rectal carcinomas | 16397240 | CNVD |
Olfactory neuroblastoma | 18408657 | CNVD |
Bladder cancer | 21909424 | CNVD |
Hodgkin''s lymphoma | 18641027 | CNVD |
Acute lymphoblastic leukemia | 21339820 | CNVD |
Cutaneous T-cell lymphoma | 21881587 | CNVD |
Myelofibrosis | 22110671 | CNVD |
Colorectal cancer | 22860045 | CNVD |
Ovarian cancer | 20844748 | CNVD |
Non-small cell lung cancer | 21829676 | CNVD |
Breast cancer | 17603634 | CNVD |
Melanoma | 18172304 | CNVD |
Breast cancer | 16608533 | CNVD |
Invasive pancreatic ductal carcinoma | 16982739 | CNVD |
Breast cancer | 21364760 | CNVD |
small cell lung cancer | 20016488 | CNVD |
early-passage human iPS cells | 21368824 | CNVD |
Lung cancer | 18438408 | CNVD |
Gastric cancer | 16891809 | CNVD |
Prostate cancer | 16573809 | CNVD |
Endometrioid adenocarcinoma | 16974079 | CNVD |
Breast cancer | 17133270 | CNVD |
Oral cancer | 21386901 | CNVD |
Ovarian clear cell carcinoma | 21343371 | CNVD |
Breast cancer | 21509527 | CNVD |
Breast cancer | 22522925 | CNVD |
Pancreatic cancer | 17952125 | CNVD |
Amyotrophic lateral sclerosis | 20688871 | CNVD |
Gastric cancer | 22014070 | CNVD |
Non-syndromic sensorineural hearing loss | 18451855 | CNVD |
Cancer | 20164919 | CNVD |
Non-syndromic sensorineural hearing loss | 22037309 | CNVD |
Melanoma | 20877625 | CNVD |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr20:29901000-29901400 | Active TSS | A549 | lung |
2 | chr20:29901000-29901600 | Active TSS | ES-I3 Cell Line | embryonic stem cell |
3 | chr20:29901200-29901400 | Enhancers | Hela-S3 | cervix |
4 | chr20:29901800-29902200 | Active TSS | Fetal Heart | heart |
5 | chr20:29912400-29912800 | ZNF genes & repeats | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
6 | chr20:29918400-29919800 | ZNF genes & repeats | ES-UCSF4 Cell Line | embryonic stem cell |
7 | chr20:29935800-29937200 | ZNF genes & repeats | ES-UCSF4 Cell Line | embryonic stem cell |
8 | chr20:29956200-29956800 | ZNF genes & repeats | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
9 | chr20:29976800-29978400 | ZNF genes & repeats | HUES6 Cell Line | embryonic stem cell |
10 | chr20:29982200-29983400 | Enhancers | Fetal Adrenal Gland | Adrenal Gland |
11 | chr20:29983200-29983400 | Enhancers | Spleen | Spleen |
12 | chr20:29987000-29987600 | ZNF genes & repeats | HUES48 Cell Line | embryonic stem cell |
13 | chr20:30001400-30001600 | Enhancers | Foreskin Melanocyte Primary Cells skin03 | Skin |
14 | chr20:30002200-30002800 | Enhancers | Foreskin Melanocyte Primary Cells skin03 | Skin |
15 | chr20:30006200-30006600 | Active TSS | K562 | blood |
16 | chr20:30012800-30013600 | Enhancers | Foreskin Melanocyte Primary Cells skin03 | Skin |
17 | chr20:30013000-30013600 | Enhancers | Foreskin Melanocyte Primary Cells skin01 | Skin |
18 | chr20:30018200-30019000 | Enhancers | ES-I3 Cell Line | embryonic stem cell |