Variant report

Variant nsv544277
Chromosome Location chr20:41289969-41543912
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:384 , 50 per page) page: 1 2 3 4 5 6 7 8
No. Chromosome Location Chromatin state Cell line Tissue
1 chr20:41271600-41300800 Weak transcription Breast Myoepithelial Primary Cells Breast
2 chr20:41295800-41296600 Enhancers Gastric stomach
3 chr20:41300800-41301000 Enhancers Breast Myoepithelial Primary Cells Breast
4 chr20:41301000-41301400 Weak transcription Breast Myoepithelial Primary Cells Breast
5 chr20:41301400-41301600 Enhancers Breast Myoepithelial Primary Cells Breast
6 chr20:41301600-41305000 Weak transcription Breast Myoepithelial Primary Cells Breast
7 chr20:41303600-41303800 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
8 chr20:41303600-41303800 Enhancers Placenta Amnion Placenta Amnion
9 chr20:41303800-41306600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
10 chr20:41304000-41306200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
11 chr20:41304000-41309600 Weak transcription Placenta Amnion Placenta Amnion
12 chr20:41305000-41306800 Strong transcription Breast Myoepithelial Primary Cells Breast
13 chr20:41305800-41306600 Enhancers iPS-20b Cell Line embryonic stem cell
14 chr20:41306200-41306600 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
15 chr20:41306600-41306800 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
16 chr20:41306600-41306800 Enhancers Pancreas Pancrea
17 chr20:41306600-41313000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
18 chr20:41306800-41310200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
19 chr20:41306800-41311000 Weak transcription Breast Myoepithelial Primary Cells Breast
20 chr20:41306800-41314000 Weak transcription Pancreas Pancrea
21 chr20:41309600-41310200 Enhancers Placenta Amnion Placenta Amnion
22 chr20:41310200-41310600 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
23 chr20:41310200-41310800 Weak transcription Placenta Amnion Placenta Amnion
24 chr20:41310600-41311000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
25 chr20:41310800-41312600 Enhancers Placenta Amnion Placenta Amnion
26 chr20:41311000-41311800 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
27 chr20:41311000-41311800 Enhancers Breast Myoepithelial Primary Cells Breast
28 chr20:41311200-41311400 Bivalent Enhancer HUES6 Cell Line embryonic stem cell
29 chr20:41311200-41311600 Enhancers iPS-18 Cell Line embryonic stem cell
30 chr20:41311800-41318200 Weak transcription Breast Myoepithelial Primary Cells Breast
31 chr20:41314000-41316400 Enhancers Pancreas Pancrea
32 chr20:41318200-41319600 Strong transcription Breast Myoepithelial Primary Cells Breast
33 chr20:41319600-41329200 Weak transcription Breast Myoepithelial Primary Cells Breast
34 chr20:41326000-41327600 Enhancers Liver Liver
35 chr20:41327600-41330400 Weak transcription Liver Liver
36 chr20:41328600-41329000 ZNF genes & repeats iPS DF 19.11 Cell Line embryonic stem cell
37 chr20:41328600-41330000 Enhancers Colon Smooth Muscle Colon
38 chr20:41328600-41330000 Enhancers Rectal Smooth Muscle rectum
39 chr20:41328800-41329600 Enhancers Cortex derived primary cultured neurospheres brain
40 chr20:41328800-41329800 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
41 chr20:41329000-41329200 Enhancers Brain Hippocampus Middle brain
42 chr20:41329200-41329800 Enhancers Breast Myoepithelial Primary Cells Breast
43 chr20:41329400-41330800 Weak transcription Brain Hippocampus Middle brain
44 chr20:41329600-41331000 Weak transcription Cortex derived primary cultured neurospheres brain
45 chr20:41329800-41330200 Weak transcription Breast Myoepithelial Primary Cells Breast
46 chr20:41329800-41330800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
47 chr20:41330000-41335200 Weak transcription Rectal Smooth Muscle rectum
48 chr20:41330000-41335400 Weak transcription Colon Smooth Muscle Colon
49 chr20:41330200-41330400 Enhancers Breast Myoepithelial Primary Cells Breast
50 chr20:41330400-41331400 Enhancers Liver Liver

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