Variant report

Variant	nsv544381
Chromosome Location	chr21:17458978-17603160
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:769)
CpG islands
(count:184)
Chromatin interactive
region (count:8)
LncRNA
region (count:12)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:769 , 50 per page) page: 1 2 3 4 5 6 7 ... 16

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr21:17591356-17591655	HepG2	liver:	n/a	n/a
2	BACH1	chr21:17479135-17479311	H1-hESC	embryonic stem cell:	n/a	n/a
3	BATF	chr21:17571912-17572188	GM12878	blood:	n/a	n/a
4	BCLAF1	chr21:17566541-17567013	GM12878	blood:	n/a	n/a
5	BHLHE40	chr21:17518610-17518645	HepG2	liver:	n/a	n/a
6	BRCA1	chr21:17567880-17568311	Hela-S3	cervix:	n/a	n/a
7	BRCA1	chr21:17496695-17497959	Hela-S3	cervix:	n/a	chr21:17496924-17496931
8	BRCA1	chr21:17565274-17565550	Hela-S3	cervix:	n/a	n/a
9	BRCA1	chr21:17566254-17567494	Hela-S3	cervix:	n/a	n/a
10	BRCA1	chr21:17541317-17542317	Hela-S3	cervix:	n/a	n/a
11	CEBPB	chr21:17527881-17528085	HepG2	liver:	n/a	n/a
12	CEBPB	chr21:17513691-17513938	A549	lung:	n/a	chr21:17513810-17513821
13	CEBPB	chr21:17496548-17497388	ECC-1	luminal epithelium:	n/a	chr21:17496934-17496947
14	CEBPB	chr21:17565274-17565667	ECC-1	luminal epithelium:	n/a	n/a
15	CEBPB	chr21:17507862-17508071	Hela-S3	cervix:	n/a	chr21:17507978-17507995
16	CEBPB	chr21:17520700-17520850	A549	lung:	n/a	n/a
17	CEBPB	chr21:17487848-17488168	IMR90	lung:	n/a	n/a
18	CEBPB	chr21:17565324-17565608	ECC-1	luminal epithelium:	n/a	n/a
19	CEBPB	chr21:17489224-17489579	A549	lung:	n/a	n/a
20	CEBPB	chr21:17527846-17528169	H1-hESC	embryonic stem cell:	n/a	n/a
21	CEBPB	chr21:17487850-17488164	HepG2	liver:	n/a	n/a
22	CEBPB	chr21:17567838-17568619	Hela-S3	cervix:	n/a	chr21:17568062-17568074 chr21:17568193-17568205
23	CEBPB	chr21:17541526-17541842	A549	lung:	n/a	chr21:17541610-17541621
24	CEBPB	chr21:17566343-17566623	IMR90	lung:	n/a	n/a
25	CEBPB	chr21:17489203-17489935	IMR90	lung:	n/a	n/a
26	CEBPB	chr21:17569504-17569819	Hela-S3	cervix:	n/a	n/a
27	CEBPB	chr21:17591389-17591641	HepG2	liver:	n/a	n/a
28	CEBPB	chr21:17541216-17542008	Hela-S3	cervix:	n/a	chr21:17541610-17541621
29	CEBPB	chr21:17496577-17497094	MCF-7	breast:	n/a	chr21:17496934-17496947
30	CEBPB	chr21:17520611-17520834	IMR90	lung:	n/a	n/a
31	CEBPB	chr21:17527934-17528133	IMR90	lung:	n/a	n/a
32	CEBPB	chr21:17507451-17507660	A549	lung:	n/a	n/a
33	CEBPB	chr21:17487823-17488137	A549	lung:	n/a	n/a
34	CEBPB	chr21:17565221-17565674	Hela-S3	cervix:	n/a	n/a
35	CEBPB	chr21:17567885-17568148	A549	lung:	n/a	chr21:17568062-17568074
36	CEBPB	chr21:17513756-17513928	HepG2	liver:	n/a	chr21:17513810-17513821
37	CEBPB	chr21:17552000-17552504	A549	lung:	n/a	chr21:17552093-17552104
38	CEBPB	chr21:17566241-17567448	Hela-S3	cervix:	n/a	chr21:17567008-17567021
39	CEBPB	chr21:17565317-17565572	IMR90	lung:	n/a	n/a
40	CEBPB	chr21:17565179-17565696	A549	lung:	n/a	n/a
41	CEBPB	chr21:17496438-17497897	Hela-S3	cervix:	n/a	chr21:17496934-17496947
42	CEBPB	chr21:17565247-17565642	A549	lung:	n/a	n/a
43	CEBPB	chr21:17496582-17497294	A549	lung:	n/a	chr21:17496934-17496947
44	CEBPB	chr21:17459872-17459920	HepG2	liver:	n/a	chr21:17459876-17459887
45	CEBPB	chr21:17487898-17488132	H1-hESC	embryonic stem cell:	n/a	n/a
46	CEBPB	chr21:17541514-17541714	HepG2	liver:	n/a	chr21:17541610-17541621
47	CEBPB	chr21:17487836-17488122	ECC-1	luminal epithelium:	n/a	n/a
48	CEBPB	chr21:17565334-17565604	A549	lung:	n/a	n/a
49	CEBPB	chr21:17496483-17497406	ECC-1	luminal epithelium:	n/a	chr21:17496934-17496947
50	CEBPB	chr21:17496590-17497506	IMR90	lung:	n/a	chr21:17496934-17496947

(count:184 , 50 per page) page: 1 2 3 4

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr21:17565263-17565313	A549	lung:	n/a
2	chr21:17565263-17565313	A549	lung:	n/a
3	chr21:17565450-17565500	HCF	heart:	n/a
4	chr21:17566381-17566431	HEEpiC	esophagus:	n/a
5	chr21:17565450-17565500	ECC-1	luminal epithelium:	n/a
6	chr21:17566381-17566431	GM19239	blood:	n/a
7	chr21:17566381-17566431	GM06990	blood:	n/a
8	chr21:17565263-17565313	HRE	kidney:	n/a
9	chr21:17565263-17565313	HNPCEpiC	eye:	n/a
10	chr21:17565450-17565500	AoSMC	blood vessel:	n/a
11	chr21:17565450-17565500	A549	lung:	n/a
12	chr21:17565263-17565313	HepG2	liver:	n/a
13	chr21:17565450-17565500	HRE	kidney:	n/a
14	chr21:17566381-17566431	LNCaP	prostate:	n/a
15	chr21:17565450-17565500	PFSK-1	brain:	n/a
16	chr21:17566381-17566431	SK-N-SH	brain:	n/a
17	chr21:17565450-17565500	HAEpiC	amniotic membrane:	n/a
18	chr21:17565263-17565313	H1-hESC	embryonic stem cell:	embryo
19	chr21:17566381-17566431	IMR90	lung:	fetal
20	chr21:17566381-17566431	HRCEpiC	kidney:	n/a
21	chr21:17565263-17565313	Hela-S3	cervix:	n/a
22	chr21:17566381-17566431	HRPEpiC	eye:	n/a
23	chr21:17565263-17565313	SAEC	small airway:	n/a
24	chr21:17565450-17565500	NT2-D1	testis:	n/a
25	chr21:17565450-17565500	AG09319	gingival:	n/a
26	chr21:17566381-17566431	A549	lung:	n/a
27	chr21:17565450-17565500	BE2_C	brain:	n/a
28	chr21:17566381-17566431	SK-N-SH_RA	brain:	n/a
29	chr21:17565263-17565313	PFSK-1	brain:	n/a
30	chr21:17566381-17566431	U87	brain:	n/a
31	chr21:17566381-17566431	ProgFib	skin:	n/a
32	chr21:17565450-17565500	AG09309	skin:	n/a
33	chr21:17565263-17565313	HAEpiC	amniotic membrane:	n/a
34	chr21:17565263-17565313	AG04449	skin:	fetal
35	chr21:17565450-17565500	HL-60	blood:	n/a
36	chr21:17565263-17565313	RPTEC	kidney:	n/a
37	chr21:17565263-17565313	HCPEpiC	choroid plexus:	n/a
38	chr21:17565450-17565500	HCT-116	colon:	n/a
39	chr21:17565263-17565313	SKMC	muscle:	n/a
40	chr21:17565263-17565313	HEK293	kidney:	embryo
41	chr21:17565450-17565500	ProgFib	skin:	n/a
42	chr21:17566381-17566431	HL-60	blood:	n/a
43	chr21:17565263-17565313	K562	blood:	n/a
44	chr21:17565450-17565500	GM12892	blood:	n/a
45	chr21:17566381-17566431	HCM	heart:	n/a
46	chr21:17565450-17565500	GM12878	blood:	n/a
47	chr21:17566381-17566431	SK-N-MC	brain:	n/a
48	chr21:17565263-17565313	NB4	blood:	n/a
49	chr21:17565263-17565313	NHBE	bronchial:	n/a
50	chr21:17565263-17565313	U87	brain:	n/a

(count:8 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr21:17490784..17492759-chr21:17494985..17496908,2	K562	blood:
2	chr21:17490784..17492759-chr21:17494985..17496908,2	K562	blood:
3	chr16:89989331..89990190-chr21:17566356..17566935,2	Hela-S3	cervix:
4	chr21:17467874..17469378-chr21:17482535..17484569,2	K562	blood:
5	chr21:17473635..17474615-chr8:88176720..88177423,2	MCF-7	breast:
6	chr21:17467874..17469378-chr21:17482535..17484569,2	K562	blood:
7	chr21:17466615..17468236-chr21:17471288..17473078,2	K562	blood:
8	chr17:77751904..77752690-chr21:17566657..17567443,2	Hela-S3	cervix:

(count:12 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-USP25-2	chr21:17566699-17566953	NONHSAT081228
2	lnc-USP25-2	chr21:17553911-17554007	ENSG00000215386
3	lnc-USP25-2	chr21:17553911-17554007	ENSG00000215386
4	lnc-USP25-2	chr21:17553911-17554007	ENSG00000215386.6
5	lnc-NRIP1-13	chr21:17493630-17493964	NONHSAT081225
6	lnc-USP25-2	chr21:17553911-17554007	ENSG00000215386
7	lnc-USP25-2	chr21:17553911-17554007	ENSG00000215386.6
8	lnc-USP25-2	chr21:17553911-17554007	ENSG00000215386.6
9	lnc-USP25-2	chr21:17566699-17566953	ENSG00000215386
10	lnc-NRIP1-12	chr21:17466735-17467692	NONHSAT081224
11	lnc-USP25-2	chr21:17566715-17566953	ENSG00000215386.6
12	lnc-USP25-2	chr21:17566788-17566953	ENSG00000215386

No data

Variant related genes	Relation type
VDAC2P1	TF binding region
RPS26P5	TF binding region
LINC00478	TF binding region
VDAC2P1	CpG island
RPS26P5	CpG island
LINC00478	CpG island
ENSG00000214976	chromatin interactions
ENSG00000258947	chromatin interactions
ENSG00000173894	chromatin interactions
PLAG1	miRNA target sites
COLEC12	miRNA target sites
CLIP4	miRNA target sites
GLCCI1	miRNA target sites

Extended variants
information (count: 5279 )
Associated
traits (count: 70 )

Variant overlapped rSNPs/rCNVs (count:5279 , 50 per page) page: 1 2 3 4 5 6 7 ... 106

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs548440382	chr21:17459000-17459001	Weak transcription Enhancers Active TSS	n/a	n/a	Overlapped CNVs	n/a
2	rs117033465	chr21:17459019-17459020	Weak transcription Enhancers Active TSS	n/a	n/a	Overlapped CNVs	n/a
3	rs546504194	chr21:17459048-17459049	Weak transcription Enhancers Active TSS	n/a	n/a	Overlapped CNVs	n/a
4	rs545040596	chr21:17459131-17459132	Weak transcription Enhancers Active TSS	n/a	n/a	Overlapped CNVs	n/a
5	rs16993551	chr21:17459140-17459141	Weak transcription Enhancers Active TSS	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
6	rs527807933	chr21:17459194-17459195	Weak transcription Enhancers Active TSS	n/a	n/a	Overlapped CNVs	n/a
7	rs547173526	chr21:17459216-17459217	Weak transcription Enhancers Active TSS	n/a	n/a	Overlapped CNVs	n/a
8	rs146023599	chr21:17459221-17459222	Weak transcription Enhancers Active TSS	n/a	n/a	Overlapped CNVs	n/a
9	rs529970213	chr21:17459250-17459251	Weak transcription Enhancers Active TSS	n/a	n/a	Overlapped CNVs	n/a
10	rs16993558	chr21:17459301-17459302	Weak transcription Enhancers Active TSS	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
11	rs547345478	chr21:17459309-17459310	Weak transcription Enhancers Active TSS	n/a	n/a	Overlapped CNVs	n/a
12	rs538249357	chr21:17459331-17459332	Weak transcription Enhancers Active TSS	n/a	n/a	Overlapped CNVs	n/a
13	rs552250542	chr21:17459341-17459342	Weak transcription Enhancers Active TSS	n/a	n/a	Overlapped CNVs	n/a
14	rs536767182	chr21:17459351-17459352	Weak transcription Enhancers Active TSS	n/a	n/a	Overlapped CNVs	n/a
15	rs113505905	chr21:17459354-17459355	Weak transcription Enhancers Active TSS	n/a	n/a	Overlapped CNVs	n/a
16	rs182840469	chr21:17459360-17459361	Weak transcription Enhancers Active TSS	n/a	n/a	Overlapped CNVs	n/a
17	rs570078021	chr21:17459383-17459384	Weak transcription Enhancers Active TSS	n/a	n/a	Overlapped CNVs	n/a
18	rs377253069	chr21:17459448-17459449	Enhancers Weak transcription Active TSS	n/a	n/a	Overlapped CNVs	n/a
19	rs2823608	chr21:17459507-17459508	Enhancers Weak transcription Active TSS	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
20	rs187422545	chr21:17459562-17459563	Enhancers Weak transcription Active TSS	n/a	n/a	Overlapped CNVs	n/a
21	rs35989361	chr21:17459564-17459565	Enhancers Weak transcription Active TSS	n/a	n/a	Overlapped CNVs	n/a
22	rs556590154	chr21:17459565-17459566	Enhancers Weak transcription Active TSS	n/a	n/a	Overlapped CNVs	n/a
23	rs191900925	chr21:17459618-17459619	Enhancers Weak transcription Active TSS	n/a	n/a	Overlapped CNVs	n/a
24	rs544978107	chr21:17459649-17459650	Enhancers Weak transcription Active TSS	n/a	n/a	Overlapped CNVs	n/a
25	rs558562834	chr21:17459693-17459694	Enhancers Weak transcription Active TSS	n/a	n/a	Overlapped CNVs	n/a
26	rs184876988	chr21:17459750-17459751	Enhancers Weak transcription Active TSS	n/a	n/a	Overlapped CNVs	n/a
27	rs541146943	chr21:17459779-17459780	Enhancers Weak transcription Active TSS	n/a	n/a	Overlapped CNVs	n/a
28	rs187696698	chr21:17459797-17459798	Enhancers Weak transcription Active TSS	n/a	n/a	Overlapped CNVs	n/a
29	rs561087376	chr21:17459820-17459821	Enhancers Weak transcription Active TSS	n/a	n/a	Overlapped CNVs	n/a
30	rs192425976	chr21:17459881-17459882	Enhancers Weak transcription Active TSS	n/a	n/a	Overlapped CNVs	n/a
31	rs138666032	chr21:17459891-17459892	Enhancers Weak transcription Active TSS	n/a	n/a	Overlapped CNVs	n/a
32	rs543640689	chr21:17459895-17459896	Enhancers Weak transcription Active TSS	n/a	n/a	Overlapped CNVs	n/a
33	rs370483295	chr21:17459916-17459917	Enhancers Weak transcription Active TSS	n/a	n/a	Overlapped CNVs	n/a
34	rs563435468	chr21:17459942-17459943	Enhancers Weak transcription Active TSS	n/a	n/a	Overlapped CNVs	n/a
35	rs558656072	chr21:17460062-17460063	Enhancers Weak transcription Active TSS Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
36	rs532478439	chr21:17460066-17460067	Enhancers Weak transcription Active TSS Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
37	rs200449968	chr21:17460071-17460072	Enhancers Weak transcription Active TSS Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
38	rs184549297	chr21:17460087-17460088	Enhancers Weak transcription Active TSS Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
39	rs73894735	chr21:17460094-17460095	Enhancers Weak transcription Active TSS Flanking Active TSS	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
40	rs528165576	chr21:17460096-17460097	Enhancers Weak transcription Active TSS Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
41	rs547984222	chr21:17460210-17460211	Weak transcription Active TSS Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
42	rs144454439	chr21:17460243-17460244	Weak transcription Active TSS Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
43	rs375580662	chr21:17460250-17460251	Weak transcription Active TSS Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
44	rs189027225	chr21:17460302-17460303	Weak transcription Active TSS Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
45	rs556744002	chr21:17460371-17460372	Weak transcription Active TSS Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
46	rs73894737	chr21:17460373-17460374	Weak transcription Active TSS Enhancers Flanking Active TSS	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
47	rs371091857	chr21:17460449-17460450	Weak transcription Flanking Active TSS Enhancers	n/a	n/a	Overlapped CNVs	n/a
48	rs538962387	chr21:17460451-17460452	Weak transcription Flanking Active TSS Enhancers	n/a	n/a	Overlapped CNVs	n/a
49	rs558491459	chr21:17460452-17460453	Weak transcription Flanking Active TSS Enhancers	n/a	n/a	Overlapped CNVs	n/a
50	rs572108583	chr21:17460464-17460465	Weak transcription Flanking Active TSS Enhancers	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:70)

Disease	PMID	Source
Ovarian cancer	21720365	CNVD
Wilms tumour	21544195	CNVD
Esophageal cancer	21851588	CNVD
Glioblastoma multiforme	21080181	CNVD
Cancer	16751803	CNVD
Medulloblastoma	21979893	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
Down syndrome	17412756	CNVD
Down syndrome	17576883	CNVD
Acute promyelocytic leukemia	19109227	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Autism	22495311	CNVD
Lung cancer	18438408	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute myeloid leukemia	20729466	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
T-cell lymphomas	19863542	CNVD
Non-small cell lung cancer	21044232	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Astrocytoma	17387387	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Glioblastoma multiforme	17387387	CNVD
Renal cell carcinoma	19461508	CNVD
Seminomas	18059402	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Acute lymphoblastic leukemia	21980252	CNVD
Metanephric adenoma	20802469	CNVD
Neuroblastoma	18923191	CNVD
Prostate cancer	19156837	CNVD
Basal cell lymphoma	17170743	CNVD
Follicular lymphoma	17170743	CNVD
Primary mediastinal b-cell lymphoma	17728785	CNVD
Cancer	20164919	CNVD
small cell lung cancer	20016488	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
lymphocytic leukemia	21291569	CNVD
Hodgkin''s lymphoma	18641027	CNVD
Acute myeloid leukemia	21251322	CNVD
abnormal development	18461090	CNVD
Breast cancer	21785460	CNVD
Breast cancer	21364760	CNVD
Multiple myeloma	17550852	CNVD
Myelofibrosis	22110671	CNVD
Alzheimer''s disease	18923514	CNVD
Alzheimer''s disease	20877625	CNVD
Follicular lymphoma	20505157	CNVD
Alzheimer''s disease	21956041	CNVD
Cancer	21183584	CNVD
Non-syndromic sensorineural hearing loss	15273396	CNVD
Invasive pancreatic ductal carcinoma	16982739	CNVD
Melanoma	18172304	CNVD
Autism	22958593	CNVD
Schizophrenia	22958593	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Lung cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Epilepsy	20502679	CNVD
22q11.2 microdeletion syndrome	19750312	CNVD
Breast cancer	20409316	CNVD
Gastric cancer	18160780	CNVD
Breast cancer	22522925	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD

Chromatin state (count:1230 , 50 per page) page: 1 2 3 4 5 6 7 ... 25

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr21:17446200-17481000	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
2	chr21:17446800-17472200	Weak transcription	Fetal Brain Female	brain
3	chr21:17454800-17466000	Weak transcription	Cortex derived primary cultured neurospheres	brain
4	chr21:17455600-17459400	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
5	chr21:17456000-17459000	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
6	chr21:17456800-17460400	Active TSS	Brain Angular Gyrus	brain
7	chr21:17457000-17459600	Active TSS	Brain Inferior Temporal Lobe	brain
8	chr21:17457200-17460000	Active TSS	Brain Substantia Nigra	brain
9	chr21:17457400-17460000	Active TSS	Brain Cingulate Gyrus	brain
10	chr21:17457400-17460000	Active TSS	Brain Hippocampus Middle	brain
11	chr21:17458000-17460400	Weak transcription	Psoas Muscle	Psoas
12	chr21:17458600-17459400	Weak transcription	Brain Anterior Caudate	brain
13	chr21:17458600-17459400	Enhancers	NHDF-Ad	bronchial
14	chr21:17458800-17459600	Enhancers	Muscle Satellite Cultured Cells	--
15	chr21:17458800-17459600	Enhancers	Osteobl	bone
16	chr21:17459400-17460200	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
17	chr21:17459400-17460400	Active TSS	Brain Anterior Caudate	brain
18	chr21:17459600-17460200	Weak transcription	Brain Inferior Temporal Lobe	brain
19	chr21:17460000-17460200	Flanking Active TSS	Brain Cingulate Gyrus	brain
20	chr21:17460000-17460600	Flanking Active TSS	Brain Hippocampus Middle	brain
21	chr21:17460000-17460600	Flanking Active TSS	Brain Substantia Nigra	brain
22	chr21:17460200-17460400	Enhancers	Brain Inferior Temporal Lobe	brain
23	chr21:17460200-17461000	Enhancers	Brain Cingulate Gyrus	brain
24	chr21:17460400-17460600	Flanking Active TSS	Brain Angular Gyrus	brain
25	chr21:17460400-17460800	Flanking Active TSS	Brain Anterior Caudate	brain
26	chr21:17460400-17460800	Flanking Active TSS	Brain Inferior Temporal Lobe	brain
27	chr21:17460600-17460800	Enhancers	Brain Angular Gyrus	brain
28	chr21:17460600-17460800	Enhancers	Brain Hippocampus Middle	brain
29	chr21:17460600-17460800	Enhancers	Brain Substantia Nigra	brain
30	chr21:17460800-17461000	Enhancers	Brain Inferior Temporal Lobe	brain
31	chr21:17460800-17462800	Weak transcription	Brain Anterior Caudate	brain
32	chr21:17460800-17462800	Weak transcription	Brain Substantia Nigra	brain
33	chr21:17461000-17461600	Weak transcription	Brain Inferior Temporal Lobe	brain
34	chr21:17461000-17467000	Weak transcription	Brain Cingulate Gyrus	brain
35	chr21:17461600-17461800	Enhancers	Psoas Muscle	Psoas
36	chr21:17461600-17463000	Enhancers	Brain Inferior Temporal Lobe	brain
37	chr21:17462800-17463200	Enhancers	Brain Anterior Caudate	brain
38	chr21:17462800-17463800	Enhancers	Brain Substantia Nigra	brain
39	chr21:17466000-17466600	ZNF genes & repeats	Cortex derived primary cultured neurospheres	brain
40	chr21:17466600-17467600	Weak transcription	Cortex derived primary cultured neurospheres	brain
41	chr21:17467000-17467800	Enhancers	Brain Cingulate Gyrus	brain
42	chr21:17467600-17468800	Strong transcription	Cortex derived primary cultured neurospheres	brain
43	chr21:17468800-17471200	Weak transcription	Cortex derived primary cultured neurospheres	brain
44	chr21:17469400-17470200	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
45	chr21:17469400-17470400	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
46	chr21:17474400-17474800	Enhancers	Brain Anterior Caudate	brain
47	chr21:17477200-17478000	ZNF genes & repeats	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
48	chr21:17478000-17481600	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
49	chr21:17480200-17480400	Enhancers	Brain Cingulate Gyrus	brain
50	chr21:17480400-17484800	Weak transcription	Brain Cingulate Gyrus	brain

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