Variant report

Variant nsv5449
Chromosome Location chr6:117954646-117999751
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:745 , 50 per page) page: 1 2 3 4 5 6 7 ... 15
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:117950800-117975000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
2 chr6:117955400-117960000 Weak transcription iPS-18 Cell Line embryonic stem cell
3 chr6:117957800-117961000 Weak transcription K562 blood
4 chr6:117958800-117959800 Enhancers HepG2 liver
5 chr6:117959400-117959800 ZNF genes & repeats H1 Cell Line embryonic stem cell
6 chr6:117959800-117960800 Weak transcription H1 Cell Line embryonic stem cell
7 chr6:117960800-117961600 ZNF genes & repeats H1 Cell Line embryonic stem cell
8 chr6:117961000-117961400 ZNF genes & repeats K562 blood
9 chr6:117961400-117966600 Weak transcription K562 blood
10 chr6:117961600-117981800 Weak transcription H1 Cell Line embryonic stem cell
11 chr6:117962200-117985400 Weak transcription HUES64 Cell Line embryonic stem cell
12 chr6:117963400-117981800 Weak transcription HUES6 Cell Line embryonic stem cell
13 chr6:117964600-117965000 Enhancers Fetal Brain Male brain
14 chr6:117965200-117967800 Weak transcription Gastric stomach
15 chr6:117965800-117966800 Weak transcription Psoas Muscle Psoas
16 chr6:117966600-117967000 Enhancers K562 blood
17 chr6:117967000-117974800 Weak transcription K562 blood
18 chr6:117969400-117995800 Weak transcription Primary hematopoietic stem cells short term culture blood
19 chr6:117971800-117989800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
20 chr6:117973000-117990600 Weak transcription iPS-20b Cell Line embryonic stem cell
21 chr6:117973800-117995600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
22 chr6:117974800-117975200 Flanking Active TSS K562 blood
23 chr6:117975000-117975200 ZNF genes & repeats ES-UCSF4 Cell Line embryonic stem cell
24 chr6:117975200-117975600 Enhancers Thymus Thymus
25 chr6:117975200-117976600 Enhancers K562 blood
26 chr6:117975200-117979800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
27 chr6:117975600-117976000 Weak transcription Thymus Thymus
28 chr6:117975600-117986200 Weak transcription iPS-18 Cell Line embryonic stem cell
29 chr6:117976000-117977000 Enhancers Thymus Thymus
30 chr6:117976000-117977400 Enhancers Fetal Thymus thymus
31 chr6:117976200-117977000 Enhancers Dnd41 blood
32 chr6:117976200-117977600 Enhancers Primary T cells from cord blood blood
33 chr6:117976400-117977000 Enhancers Primary T helper naive cells fromperipheralblood blood
34 chr6:117976400-117977000 Enhancers Primary T helper cells PMA-I stimulated --
35 chr6:117976400-117977400 Enhancers Primary T killer naive cells fromperipheralblood blood
36 chr6:117976600-117986400 Weak transcription K562 blood
37 chr6:117978000-117995600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
38 chr6:117979400-117985600 Weak transcription HUES48 Cell Line embryonic stem cell
39 chr6:117979800-117980200 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
40 chr6:117980200-117981200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
41 chr6:117980800-117985600 Weak transcription H9 Cell Line embryonic stem cell
42 chr6:117981200-117983000 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
43 chr6:117981800-117982600 Strong transcription HUES6 Cell Line embryonic stem cell
44 chr6:117981800-117983000 Strong transcription H1 Cell Line embryonic stem cell
45 chr6:117982600-117990000 Weak transcription HUES6 Cell Line embryonic stem cell
46 chr6:117983000-117983400 Weak transcription H1 Cell Line embryonic stem cell
47 chr6:117983000-117983400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
48 chr6:117983400-117984600 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
49 chr6:117983400-117984800 Strong transcription H1 Cell Line embryonic stem cell
50 chr6:117984600-117991000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell

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