Variant report

Variant nsv546658
Chromosome Location chr1:80536798-80683606
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:133 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:80537600-80539800 Enhancers Fetal Brain Male brain
2 chr1:80539200-80540200 Enhancers Fetal Brain Female brain
3 chr1:80540200-80540800 Weak transcription Fetal Brain Female brain
4 chr1:80540800-80541000 Enhancers Fetal Brain Female brain
5 chr1:80541000-80541400 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
6 chr1:80545200-80545600 Enhancers Fetal Heart heart
7 chr1:80545600-80554000 Weak transcription Fetal Heart heart
8 chr1:80551000-80553000 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
9 chr1:80552000-80552600 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
10 chr1:80563600-80568800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
11 chr1:80564600-80565600 Enhancers Liver Liver
12 chr1:80565600-80566000 Flanking Active TSS Liver Liver
13 chr1:80566000-80566200 Enhancers Liver Liver
14 chr1:80577800-80578400 Weak transcription Liver Liver
15 chr1:80578600-80579000 Enhancers Liver Liver
16 chr1:80579000-80579200 Flanking Active TSS Liver Liver
17 chr1:80579200-80579400 Enhancers Liver Liver
18 chr1:80579400-80579600 Flanking Active TSS Liver Liver
19 chr1:80579600-80580200 Enhancers Liver Liver
20 chr1:80604800-80608800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
21 chr1:80608800-80609200 ZNF genes & repeats H1 Derived Mesenchymal Stem Cells ES cell derived
22 chr1:80609000-80609400 ZNF genes & repeats Esophagus oesophagus
23 chr1:80619400-80620200 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
24 chr1:80619800-80620000 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
25 chr1:80620200-80626600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
26 chr1:80621000-80621800 Enhancers HUES64 Cell Line embryonic stem cell
27 chr1:80621000-80621800 Enhancers iPS-15b Cell Line embryonic stem cell
28 chr1:80621200-80621600 Enhancers iPS-18 Cell Line embryonic stem cell
29 chr1:80621400-80621600 Enhancers iPS-20b Cell Line embryonic stem cell
30 chr1:80621400-80622000 Enhancers ES-I3 Cell Line embryonic stem cell
31 chr1:80621400-80622200 Enhancers HUES48 Cell Line embryonic stem cell
32 chr1:80621600-80623000 Weak transcription iPS-18 Cell Line embryonic stem cell
33 chr1:80621800-80623000 Weak transcription HUES64 Cell Line embryonic stem cell
34 chr1:80621800-80623000 Weak transcription iPS-15b Cell Line embryonic stem cell
35 chr1:80621800-80623000 Weak transcription iPS-20b Cell Line embryonic stem cell
36 chr1:80622000-80623400 Weak transcription ES-I3 Cell Line embryonic stem cell
37 chr1:80622200-80623200 Weak transcription HUES48 Cell Line embryonic stem cell
38 chr1:80623000-80624200 Enhancers iPS-18 Cell Line embryonic stem cell
39 chr1:80623000-80624200 Enhancers iPS-20b Cell Line embryonic stem cell
40 chr1:80623000-80624200 Enhancers ES-UCSF4 Cell Line embryonic stem cell
41 chr1:80623000-80624600 Enhancers HUES64 Cell Line embryonic stem cell
42 chr1:80623000-80624600 Enhancers iPS-15b Cell Line embryonic stem cell
43 chr1:80623200-80624200 Enhancers HUES48 Cell Line embryonic stem cell
44 chr1:80623400-80624800 Enhancers ES-I3 Cell Line embryonic stem cell
45 chr1:80623600-80625200 Enhancers Fetal Brain Male brain
46 chr1:80623800-80624200 Enhancers HUES6 Cell Line embryonic stem cell
47 chr1:80623800-80624200 Enhancers Placenta Amnion Placenta Amnion
48 chr1:80624200-80626000 Weak transcription Placenta Amnion Placenta Amnion
49 chr1:80624600-80624800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
50 chr1:80624600-80624800 Bivalent Enhancer Foreskin Melanocyte Primary Cells skin03 Skin

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