Variant report

Variant nsv546666
Chromosome Location chr1:80909417-81052058
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:194 , 50 per page) page: 1 2 3 4
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:80903200-80911000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
2 chr1:80910200-80910600 Enhancers HSMMtube muscle
3 chr1:80910400-80910800 Enhancers Hela-S3 cervix
4 chr1:80910600-80911200 Enhancers HMEC breast
5 chr1:80911000-80911200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
6 chr1:80911200-80912400 Weak transcription HMEC breast
7 chr1:80911200-80912800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
8 chr1:80912400-80912600 Enhancers HMEC breast
9 chr1:80912800-80913000 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
10 chr1:80916800-80917200 Enhancers Esophagus oesophagus
11 chr1:80921400-80921600 Enhancers iPS-15b Cell Line embryonic stem cell
12 chr1:80922400-80923600 Enhancers Cortex derived primary cultured neurospheres brain
13 chr1:80922400-80923800 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
14 chr1:80922400-80923800 Enhancers iPS-18 Cell Line embryonic stem cell
15 chr1:80922400-80924000 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
16 chr1:80922600-80922800 Enhancers ES-UCSF4 Cell Line embryonic stem cell
17 chr1:80922600-80923800 Enhancers HUES64 Cell Line embryonic stem cell
18 chr1:80922600-80924000 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
19 chr1:80923200-80923600 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
20 chr1:80923200-80923800 Enhancers ES-WA7 Cell Line embryonic stem cell
21 chr1:80923200-80923800 Enhancers iPS-20b Cell Line embryonic stem cell
22 chr1:80923400-80923600 Enhancers ES-UCSF4 Cell Line embryonic stem cell
23 chr1:80923400-80923800 Enhancers ES-I3 Cell Line embryonic stem cell
24 chr1:80923400-80923800 Enhancers iPS-15b Cell Line embryonic stem cell
25 chr1:80938800-80939600 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
26 chr1:80939600-80940200 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
27 chr1:80951200-80951800 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
28 chr1:80961600-80961800 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
29 chr1:80961600-80961800 ZNF genes & repeats Pancreas Pancrea
30 chr1:80963600-80964600 Enhancers Fetal Lung lung
31 chr1:80964200-80964600 Enhancers Adipose Nuclei Adipose
32 chr1:80964200-80964600 Enhancers Duodenum Smooth Muscle Duodenum
33 chr1:80964200-80964600 Enhancers Fetal Brain Female brain
34 chr1:80964200-80964800 Enhancers Fetal Heart heart
35 chr1:80964200-80965000 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
36 chr1:80964400-80964600 Enhancers HUES48 Cell Line embryonic stem cell
37 chr1:80970800-80971000 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
38 chr1:80971200-80972000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
39 chr1:80971600-80971800 Weak transcription HUES48 Cell Line embryonic stem cell
40 chr1:80971600-80972600 Enhancers iPS-15b Cell Line embryonic stem cell
41 chr1:80971800-80972200 Enhancers H1 Cell Line embryonic stem cell
42 chr1:80971800-80972200 Enhancers HUES6 Cell Line embryonic stem cell
43 chr1:80971800-80972200 Active TSS iPS-20b Cell Line embryonic stem cell
44 chr1:80971800-80972400 Enhancers HUES48 Cell Line embryonic stem cell
45 chr1:80971800-80972400 Enhancers HUES64 Cell Line embryonic stem cell
46 chr1:80971800-80972600 Enhancers iPS-18 Cell Line embryonic stem cell
47 chr1:80972000-80972200 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
48 chr1:80972000-80972200 Enhancers ES-UCSF4 Cell Line embryonic stem cell
49 chr1:80972000-80972400 Enhancers ES-I3 Cell Line embryonic stem cell
50 chr1:80972200-80972600 Enhancers iPS-20b Cell Line embryonic stem cell

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