Variant report

Variant nsv546928
Chromosome Location chr1:103331349-103371652
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:269 , 50 per page) page: 1 2 3 4 5 6
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:103324800-103334200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
2 chr1:103334000-103349800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
3 chr1:103334200-103334800 ZNF genes & repeats H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
4 chr1:103335400-103350000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
5 chr1:103337800-103338200 ZNF genes & repeats H1 Cell Line embryonic stem cell
6 chr1:103337800-103338200 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
7 chr1:103338200-103340000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
8 chr1:103338400-103342800 Weak transcription Cortex derived primary cultured neurospheres brain
9 chr1:103338400-103343400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
10 chr1:103338400-103369400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
11 chr1:103338600-103342600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
12 chr1:103338600-103345000 Weak transcription NH-A brain
13 chr1:103338800-103357200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
14 chr1:103339000-103342600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
15 chr1:103339000-103345000 Weak transcription HSMM muscle
16 chr1:103339200-103349800 Weak transcription HUES64 Cell Line embryonic stem cell
17 chr1:103340000-103345200 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
18 chr1:103340800-103350000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
19 chr1:103341400-103345000 Weak transcription HSMMtube muscle
20 chr1:103341400-103349800 Weak transcription Breast Myoepithelial Primary Cells Breast
21 chr1:103341600-103352000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
22 chr1:103342400-103349800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
23 chr1:103342600-103345200 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
24 chr1:103342600-103345200 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
25 chr1:103342800-103346000 Strong transcription Cortex derived primary cultured neurospheres brain
26 chr1:103343000-103345800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
27 chr1:103343400-103345000 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
28 chr1:103343400-103352000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
29 chr1:103343400-103355800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
30 chr1:103343400-103356200 Weak transcription Fetal Heart heart
31 chr1:103343400-103366000 Weak transcription Fetal Brain Female brain
32 chr1:103344400-103349800 Weak transcription H9 Cell Line embryonic stem cell
33 chr1:103344600-103345000 Enhancers A549 lung
34 chr1:103344800-103345000 Enhancers Muscle Satellite Cultured Cells --
35 chr1:103344800-103345000 Enhancers Osteobl bone
36 chr1:103344800-103345600 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
37 chr1:103345000-103345200 Active TSS IMR90 fetal lung fibroblasts Cell Line lung
38 chr1:103345000-103345200 Transcr. at gene 5' and 3' Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
39 chr1:103345000-103345200 Flanking Active TSS Muscle Satellite Cultured Cells --
40 chr1:103345000-103345400 Flanking Active TSS NH-A brain
41 chr1:103345000-103345600 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
42 chr1:103345000-103345600 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
43 chr1:103345000-103345600 Flanking Active TSS A549 lung
44 chr1:103345000-103345600 Enhancers Hela-S3 cervix
45 chr1:103345000-103345600 Enhancers HSMMtube muscle
46 chr1:103345000-103345600 Flanking Active TSS Osteobl bone
47 chr1:103345000-103345800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
48 chr1:103345000-103345800 Enhancers NHDF-Ad bronchial
49 chr1:103345000-103346000 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
50 chr1:103345000-103346000 Enhancers HSMM muscle

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