Variant report

Variant nsv547883
Chromosome Location chr1:152539393-152590565
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:37 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:152538400-152539600 Enhancers HMEC breast
2 chr1:152538400-152539800 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
3 chr1:152538800-152539400 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
4 chr1:152538800-152539800 Enhancers NHEK skin
5 chr1:152539000-152539600 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
6 chr1:152539400-152541800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
7 chr1:152541800-152542400 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
8 chr1:152542000-152544400 ZNF genes & repeats HUES48 Cell Line embryonic stem cell
9 chr1:152542400-152543000 ZNF genes & repeats Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
10 chr1:152543000-152552600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
11 chr1:152546400-152547000 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
12 chr1:152547000-152552400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
13 chr1:152549400-152549800 Enhancers GM12878-XiMat blood
14 chr1:152549400-152550800 Enhancers Muscle Satellite Cultured Cells --
15 chr1:152549400-152551400 Enhancers HSMMtube muscle
16 chr1:152549400-152551600 Enhancers HSMM muscle
17 chr1:152549800-152551400 Weak transcription GM12878-XiMat blood
18 chr1:152550800-152555200 Weak transcription Muscle Satellite Cultured Cells --
19 chr1:152551400-152552600 Enhancers GM12878-XiMat blood
20 chr1:152551600-152552800 Weak transcription HSMM muscle
21 chr1:152552400-152553200 ZNF genes & repeats iPS DF 19.11 Cell Line embryonic stem cell
22 chr1:152552400-152553400 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
23 chr1:152552600-152553200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
24 chr1:152552600-152553200 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
25 chr1:152552600-152553400 Enhancers HMEC breast
26 chr1:152552800-152553200 Enhancers HSMM muscle
27 chr1:152552800-152553400 Enhancers NHEK skin
28 chr1:152553400-152555000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
29 chr1:152553400-152555000 Weak transcription HMEC breast
30 chr1:152553400-152555200 Weak transcription NHEK skin
31 chr1:152555000-152555600 Flanking Active TSS A549 lung
32 chr1:152555000-152555600 Enhancers HMEC breast
33 chr1:152555000-152555800 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
34 chr1:152555200-152555600 Enhancers NHEK skin
35 chr1:152555400-152555600 Enhancers Muscle Satellite Cultured Cells --
36 chr1:152555400-152555800 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
37 chr1:152569600-152570200 Enhancers Liver Liver

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