No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
1 |
rs16828170 |
chr1:169229144-169229145 |
Weak transcription Enhancers
|
n/a
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
2 |
rs192296367 |
chr1:169229281-169229282 |
Weak transcription Enhancers Flanking Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
3 |
rs551636022 |
chr1:169229304-169229305 |
Weak transcription Enhancers Flanking Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
4 |
rs3766083 |
chr1:169229327-169229328 |
Weak transcription Enhancers Flanking Active TSS
|
n/a
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
5 |
rs543637495 |
chr1:169229328-169229329 |
Weak transcription Enhancers Flanking Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
6 |
rs183302155 |
chr1:169229351-169229352 |
Weak transcription Enhancers Flanking Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
7 |
rs74646433 |
chr1:169229369-169229370 |
Weak transcription Enhancers Flanking Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
8 |
rs115459403 |
chr1:169229396-169229397 |
Weak transcription Enhancers Flanking Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
9 |
rs370861158 |
chr1:169229408-169229409 |
Weak transcription Enhancers Flanking Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
10 |
rs373801837 |
chr1:169229414-169229415 |
Weak transcription Enhancers Flanking Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
11 |
rs188080887 |
chr1:169229431-169229432 |
Weak transcription Enhancers Flanking Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
12 |
rs529704561 |
chr1:169229518-169229519 |
Weak transcription Enhancers Flanking Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
13 |
rs148056780 |
chr1:169229583-169229584 |
Weak transcription Enhancers Flanking Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
14 |
rs570012393 |
chr1:169229584-169229585 |
Weak transcription Enhancers Flanking Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
15 |
rs74125221 |
chr1:169229599-169229600 |
Weak transcription Enhancers Flanking Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
16 |
rs552358995 |
chr1:169229604-169229605 |
Weak transcription Enhancers Flanking Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
17 |
rs202214804 |
chr1:169229683-169229684 |
Weak transcription Enhancers Flanking Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
18 |
rs191396233 |
chr1:169229692-169229693 |
Weak transcription Enhancers Flanking Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
19 |
rs570738564 |
chr1:169229720-169229721 |
Weak transcription Enhancers Flanking Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
20 |
rs724049 |
chr1:169229768-169229769 |
Weak transcription Enhancers Flanking Active TSS
|
n/a
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
21 |
rs724048 |
chr1:169229855-169229856 |
Weak transcription Enhancers Strong transcription ZNF genes & repeats Flanking Active TSS
|
n/a
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
22 |
rs184119403 |
chr1:169229862-169229863 |
Weak transcription Enhancers Strong transcription ZNF genes & repeats Flanking Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
23 |
rs78106765 |
chr1:169229908-169229909 |
Weak transcription Enhancers Strong transcription ZNF genes & repeats Flanking Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
24 |
rs372960941 |
chr1:169229927-169229928 |
Weak transcription Enhancers Strong transcription ZNF genes & repeats Flanking Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
25 |
rs557436540 |
chr1:169229942-169229943 |
Weak transcription Enhancers Strong transcription ZNF genes & repeats Flanking Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
26 |
rs189540671 |
chr1:169229964-169229965 |
Weak transcription Enhancers Strong transcription ZNF genes & repeats Flanking Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
27 |
rs192582119 |
chr1:169230077-169230078 |
Weak transcription Enhancers Strong transcription ZNF genes & repeats Flanking Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
28 |
rs146241206 |
chr1:169230145-169230146 |
Weak transcription Enhancers Strong transcription ZNF genes & repeats Flanking Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
29 |
rs16862051 |
chr1:169230180-169230181 |
Weak transcription Enhancers Strong transcription ZNF genes & repeats Flanking Active TSS
|
n/a
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
30 |
rs78000130 |
chr1:169230197-169230198 |
Weak transcription Enhancers Strong transcription ZNF genes & repeats Flanking Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
31 |
rs12088527 |
chr1:169230284-169230285 |
Weak transcription Enhancers Strong transcription ZNF genes & repeats Flanking Active TSS
|
n/a
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
32 |
rs559404116 |
chr1:169230285-169230286 |
Weak transcription Enhancers Strong transcription ZNF genes & repeats Flanking Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
33 |
rs529799488 |
chr1:169230298-169230299 |
Weak transcription Enhancers Strong transcription ZNF genes & repeats Flanking Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
34 |
rs75432392 |
chr1:169230316-169230317 |
Weak transcription Enhancers Strong transcription ZNF genes & repeats Flanking Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
35 |
rs532001973 |
chr1:169230395-169230396 |
Weak transcription Enhancers Strong transcription ZNF genes & repeats Flanking Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
36 |
rs185021467 |
chr1:169230443-169230444 |
Weak transcription Strong transcription Enhancers ZNF genes & repeats
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
37 |
rs138688365 |
chr1:169230468-169230469 |
Weak transcription Strong transcription Enhancers ZNF genes & repeats
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
38 |
rs75684590 |
chr1:169230631-169230632 |
Weak transcription Strong transcription Genic enhancers Enhancers ZNF genes & repeats
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
39 |
rs12405725 |
chr1:169230641-169230642 |
Weak transcription Strong transcription Genic enhancers Enhancers ZNF genes & repeats
|
n/a
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
40 |
rs188843152 |
chr1:169230738-169230739 |
Weak transcription Strong transcription Genic enhancers Enhancers ZNF genes & repeats
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
41 |
rs546730956 |
chr1:169230905-169230906 |
Weak transcription Strong transcription Genic enhancers Enhancers Flanking Active TSS ZNF genes & repeats
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
42 |
rs568535581 |
chr1:169230941-169230942 |
Weak transcription Strong transcription Genic enhancers Enhancers Flanking Active TSS ZNF genes & repeats
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
43 |
rs61808900 |
chr1:169230953-169230954 |
Weak transcription Strong transcription Genic enhancers Enhancers Flanking Active TSS ZNF genes & repeats
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
44 |
rs535613519 |
chr1:169230979-169230980 |
Weak transcription Strong transcription Genic enhancers Enhancers Flanking Active TSS ZNF genes & repeats
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
45 |
rs10919118 |
chr1:169231076-169231077 |
Weak transcription Strong transcription Genic enhancers ZNF genes & repeats
|
n/a
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
46 |
rs35416900 |
chr1:169231142-169231143 |
Weak transcription Strong transcription Genic enhancers ZNF genes & repeats
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
47 |
rs7529148 |
chr1:169231177-169231178 |
Weak transcription Strong transcription Genic enhancers ZNF genes & repeats
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
48 |
rs537311150 |
chr1:169231181-169231182 |
Weak transcription Strong transcription Genic enhancers ZNF genes & repeats
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
49 |
rs559106675 |
chr1:169231236-169231237 |
Weak transcription Strong transcription ZNF genes & repeats
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
50 |
rs558904040 |
chr1:169231257-169231258 |
Weak transcription Strong transcription ZNF genes & repeats
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|