Variant report

Variant nsv548162
Chromosome Location chr1:169229144-169253471
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:90 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:169220000-169229800 Weak transcription HUVEC blood vessel
2 chr1:169220600-169230000 Weak transcription Liver Liver
3 chr1:169225000-169229800 Weak transcription Primary T cells from cord blood blood
4 chr1:169227200-169231200 Weak transcription Primary T helper cells PMA-I stimulated --
5 chr1:169227600-169231000 Weak transcription Primary B cells from cord blood blood
6 chr1:169227600-169231800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
7 chr1:169227600-169233000 Weak transcription Fetal Kidney kidney
8 chr1:169227600-169257400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
9 chr1:169228200-169229800 Weak transcription Rectal Mucosa Donor 31 rectum
10 chr1:169228400-169230400 Enhancers Primary monocytes fromperipheralblood blood
11 chr1:169228400-169230600 Enhancers Primary hematopoietic stem cells short term culture blood
12 chr1:169228400-169230800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
13 chr1:169228400-169231000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
14 chr1:169228400-169257400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
15 chr1:169228600-169229200 Enhancers Monocytes-CD14+_RO01746 blood
16 chr1:169229000-169230200 Enhancers Primary neutrophils fromperipheralblood blood
17 chr1:169229000-169233000 Weak transcription Brain Angular Gyrus brain
18 chr1:169229200-169230400 Flanking Active TSS Monocytes-CD14+_RO01746 blood
19 chr1:169229800-169230200 ZNF genes & repeats Fetal Brain Female brain
20 chr1:169229800-169230400 Enhancers Primary hematopoietic stem cells blood
21 chr1:169229800-169230400 Strong transcription HUVEC blood vessel
22 chr1:169229800-169232000 Strong transcription Primary T cells from cord blood blood
23 chr1:169229800-169232000 ZNF genes & repeats Rectal Mucosa Donor 31 rectum
24 chr1:169230400-169230800 Enhancers Monocytes-CD14+_RO01746 blood
25 chr1:169230400-169232200 Weak transcription HUVEC blood vessel
26 chr1:169230400-169235400 Weak transcription Primary hematopoietic stem cells blood
27 chr1:169230600-169231200 Genic enhancers Primary hematopoietic stem cells short term culture blood
28 chr1:169230800-169231000 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
29 chr1:169231000-169234000 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
30 chr1:169231200-169231400 ZNF genes & repeats Primary T helper cells PMA-I stimulated --
31 chr1:169231200-169232000 ZNF genes & repeats Primary hematopoietic stem cells short term culture blood
32 chr1:169231400-169231600 Weak transcription Primary T helper cells PMA-I stimulated --
33 chr1:169231800-169232000 ZNF genes & repeats H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
34 chr1:169232000-169234200 Weak transcription Primary T cells from cord blood blood
35 chr1:169233800-169234800 Weak transcription Rectal Mucosa Donor 31 rectum
36 chr1:169234200-169234600 Strong transcription Primary T cells from cord blood blood
37 chr1:169234600-169240800 Weak transcription Primary T cells from cord blood blood
38 chr1:169235000-169235400 Enhancers HepG2 liver
39 chr1:169235200-169235400 ZNF genes & repeats Fetal Intestine Large intestine
40 chr1:169235200-169240200 Weak transcription Rectal Mucosa Donor 31 rectum
41 chr1:169235400-169240000 Weak transcription Fetal Intestine Large intestine
42 chr1:169235400-169240200 Weak transcription HepG2 liver
43 chr1:169237800-169238000 ZNF genes & repeats Primary hematopoietic stem cells short term culture blood
44 chr1:169238000-169240000 Weak transcription Primary hematopoietic stem cells short term culture blood
45 chr1:169239600-169241000 Enhancers Rectal Smooth Muscle rectum
46 chr1:169239600-169241000 Enhancers Stomach Mucosa stomach
47 chr1:169240000-169240200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
48 chr1:169240000-169240800 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
49 chr1:169240000-169240800 Enhancers Colon Smooth Muscle Colon
50 chr1:169240000-169241000 Enhancers Primary hematopoietic stem cells short term culture blood

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