Variant report

Variant	nsv548403
Chromosome Location	chr1:186642429-186700959
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr1:186685033-186685395	HepG2	liver:	n/a	n/a
2	ATF3	chr1:186684842-186685516	A549	lung:	n/a	n/a
3	ATF3	chr1:186684933-186685545	A549	lung:	n/a	n/a
4	ATF3	chr1:186649301-186649931	A549	lung:	n/a	n/a
5	ATF3	chr1:186649257-186649868	A549	lung:	n/a	n/a
6	BACH1	chr1:186649246-186649635	H1-hESC	embryonic stem cell:	n/a	n/a
7	BACH1	chr1:186685718-186685775	K562	blood:	n/a	n/a
8	BATF	chr1:186669910-186670210	GM12878	blood:	n/a	n/a
9	BCL3	chr1:186684923-186685577	A549	lung:	n/a	chr1:186685087-186685096
10	BCL3	chr1:186677797-186678310	A549	lung:	n/a	n/a
11	BCL3	chr1:186684554-186686123	A549	lung:	n/a	chr1:186685087-186685096
12	BCL3	chr1:186649013-186650057	A549	lung:	n/a	chr1:186650009-186650022 chr1:186650012-186650021 chr1:186650006-186650019 chr1:186649718-186649727 chr1:186650010-186650023 chr1:186650009-186650018 chr1:186649344-186649357
13	BCL3	chr1:186649029-186650035	A549	lung:	n/a	chr1:186650009-186650022 chr1:186650012-186650021 chr1:186650006-186650019 chr1:186649718-186649727 chr1:186650010-186650023 chr1:186650009-186650018 chr1:186649344-186649357
14	BHLHE40	chr1:186685128-186685422	A549	lung:	n/a	n/a
15	BRCA1	chr1:186684933-186686067	Hela-S3	cervix:	n/a	n/a
16	BRCA1	chr1:186650113-186652019	Hela-S3	cervix:	n/a	chr1:186650261-186650268 chr1:186651446-186651453
17	BRCA1	chr1:186649014-186649898	Hela-S3	cervix:	n/a	n/a
18	CBX3	chr1:186649095-186649898	HCT-116	colon:	n/a	n/a
19	CEBPB	chr1:186670035-186670061	A549	lung:	n/a	n/a
20	CEBPB	chr1:186650995-186651335	A549	lung:	n/a	chr1:186651144-186651155 chr1:186651144-186651157
21	CEBPB	chr1:186684975-186685336	HepG2	liver:	n/a	n/a
22	CEBPB	chr1:186677737-186678053	A549	lung:	n/a	n/a
23	CEBPB	chr1:186649254-186650099	A549	lung:	n/a	chr1:186649680-186649689 chr1:186649678-186649691 chr1:186649680-186649689 chr1:186649680-186649689
24	CEBPB	chr1:186649073-186650354	Hela-S3	cervix:	n/a	chr1:186649680-186649689 chr1:186649678-186649691 chr1:186649680-186649689 chr1:186649680-186649689
25	CEBPB	chr1:186649209-186649865	H1-hESC	embryonic stem cell:	n/a	chr1:186649680-186649689 chr1:186649678-186649691 chr1:186649680-186649689 chr1:186649680-186649689
26	CEBPB	chr1:186650957-186651350	Hela-S3	cervix:	n/a	chr1:186651144-186651155 chr1:186651144-186651157
27	CEBPB	chr1:186651856-186652176	Hela-S3	cervix:	n/a	n/a
28	CEBPB	chr1:186649370-186649884	MCF-7	breast:	n/a	chr1:186649680-186649689 chr1:186649678-186649691 chr1:186649680-186649689 chr1:186649680-186649689
29	CEBPB	chr1:186650968-186651298	IMR90	lung:	n/a	chr1:186651144-186651155 chr1:186651144-186651157
30	CEBPB	chr1:186684888-186686160	A549	lung:	n/a	n/a
31	CEBPB	chr1:186649387-186649938	A549	lung:	n/a	chr1:186649680-186649689 chr1:186649678-186649691 chr1:186649680-186649689 chr1:186649680-186649689
32	CEBPB	chr1:186668718-186669045	Hela-S3	cervix:	n/a	chr1:186668906-186668917 chr1:186668904-186668917 chr1:186668906-186668917
33	CEBPB	chr1:186649420-186650142	A549	lung:	n/a	chr1:186649680-186649689 chr1:186649678-186649691 chr1:186649680-186649689 chr1:186649680-186649689
34	CEBPB	chr1:186651105-186651223	HepG2	liver:	n/a	chr1:186651144-186651155 chr1:186651144-186651157
35	CEBPB	chr1:186684711-186686071	Hela-S3	cervix:	n/a	n/a
36	CEBPB	chr1:186649446-186649905	ECC-1	luminal epithelium:	n/a	chr1:186649680-186649689 chr1:186649678-186649691 chr1:186649680-186649689 chr1:186649680-186649689
37	CEBPB	chr1:186651954-186651991	A549	lung:	n/a	n/a
38	CEBPB	chr1:186649165-186649952	HCT-116	colon:	n/a	chr1:186649680-186649689 chr1:186649678-186649691 chr1:186649680-186649689 chr1:186649680-186649689
39	CEBPB	chr1:186649433-186649949	IMR90	lung:	n/a	chr1:186649680-186649689 chr1:186649678-186649691 chr1:186649680-186649689 chr1:186649680-186649689
40	CEBPB	chr1:186674169-186674415	HepG2	liver:	n/a	chr1:186674308-186674319
41	CEBPB	chr1:186649511-186649818	HepG2	liver:	n/a	chr1:186649680-186649689 chr1:186649678-186649691 chr1:186649680-186649689 chr1:186649680-186649689
42	CEBPB	chr1:186684930-186685400	A549	lung:	n/a	n/a
43	CEBPB	chr1:186677717-186678092	IMR90	lung:	n/a	n/a
44	CEBPB	chr1:186674169-186674446	A549	lung:	n/a	chr1:186674308-186674319
45	CEBPB	chr1:186696671-186697227	A549	lung:	n/a	n/a
46	CEBPB	chr1:186684848-186685708	A549	lung:	n/a	n/a
47	CEBPB	chr1:186677744-186678237	Hela-S3	cervix:	n/a	n/a
48	CEBPB	chr1:186674265-186674429	Hela-S3	cervix:	n/a	chr1:186674308-186674319
49	CEBPB	chr1:186673032-186673252	Hela-S3	cervix:	n/a	n/a
50	CEBPB	chr1:186670043-186670079	HepG2	liver:	n/a	n/a

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr1:186649985-186650035	HL-60	blood:	n/a
2	chr1:186649330-186649380	SKMC	muscle:	n/a
3	chr1:186649985-186650035	HL-60	blood:	n/a
4	chr1:186649330-186649380	SKMC	muscle:	n/a
5	chr1:186650479-186650529	RPTEC	kidney:	n/a
6	chr1:186649330-186649380	HCM	heart:	n/a
7	chr1:186649354-186649404	H1-hESC	embryonic stem cell:	embryo
8	chr1:186649877-186649927	A549	lung:	n/a
9	chr1:186650479-186650529	HRCEpiC	kidney:	n/a
10	chr1:186650479-186650529	SK-N-SH	brain:	n/a
11	chr1:186649354-186649404	A549	lung:	n/a
12	chr1:186650441-186650491	K562	blood:	n/a
13	chr1:186649559-186649609	HepG2	liver:	n/a
14	chr1:186646027-186646077	NH-A	brain:	n/a
15	chr1:186649330-186649380	AoSMC	blood vessel:	n/a
16	chr1:186649985-186650035	SK-N-MC	brain:	n/a
17	chr1:186649253-186649303	GM19239	blood:	n/a
18	chr1:186649877-186649927	PANC-1	pancreas:	n/a
19	chr1:186649153-186649203	HCPEpiC	choroid plexus:	n/a
20	chr1:186649985-186650035	GM12891	blood:	n/a
21	chr1:186649812-186649862	AG04449	skin:	fetal
22	chr1:186649153-186649203	AG10803	skin:	n/a
23	chr1:186649519-186649569	SAEC	small airway:	n/a
24	chr1:186649530-186649580	HRPEpiC	eye:	n/a
25	chr1:186649153-186649203	PFSK-1	brain:	n/a
26	chr1:186653723-186653773	HUVEC	blood vessel:	n/a
27	chr1:186649631-186649681	SK-N-SH_RA	brain:	n/a
28	chr1:186649530-186649580	Caco-2	colon:	n/a
29	chr1:186649519-186649569	GM12891	blood:	n/a
30	chr1:186649354-186649404	GM12878	blood:	n/a
31	chr1:186650479-186650529	MCF10A-Er-Src	breast:	n/a
32	chr1:186649985-186650035	PrEC	prostate:	n/a
33	chr1:186649530-186649580	BE2_C	brain:	n/a
34	chr1:186649519-186649569	RPTEC	kidney:	n/a
35	chr1:186649631-186649681	U87	brain:	n/a
36	chr1:186649559-186649609	GM12878	blood:	n/a
37	chr1:186649631-186649681	NHDF-neo	bronchial:	n/a
38	chr1:186653723-186653773	SAEC	small airway:	n/a
39	chr1:186649153-186649203	Hepatocyte	liver:	n/a
40	chr1:186649877-186649927	HIPEpiC	eye:	n/a
41	chr1:186649877-186649927	CMK	blood:	n/a
42	chr1:186650479-186650529	HAEpiC	amniotic membrane:	n/a
43	chr1:186646027-186646077	PANC-1	pancreas:	n/a
44	chr1:186649253-186649303	T-47D	breast:	n/a
45	chr1:186649530-186649580	NHBE	bronchial:	n/a
46	chr1:186649330-186649380	GM12892	blood:	n/a
47	chr1:186649877-186649927	HPAEpiC	pulmonary alveolar:	n/a
48	chr1:186649530-186649580	HCF	heart:	n/a
49	chr1:186646027-186646077	AG09309	skin:	n/a
50	chr1:186653723-186653773	HPAEpiC	pulmonary alveolar:	n/a

No.	Distal block	Cell Line	Cell type
1	chr1:186652649..186655604-chr1:186657308..186658935,2	MCF-7	breast:
2	chr1:186637647..186639575-chr1:186642756..186645000,2	K562	blood:
3	chr1:186649372..186649943-chr6:111136234..111137226,2	Hela-S3	cervix:
4	chr1:186649238..186650022-chr6:27860827..27861541,2	Hela-S3	cervix:
5	chr1:186649541..186650227-chr19:18391946..18392626,2	Hela-S3	cervix:
6	chr1:186652649..186655604-chr1:186657308..186658935,2	MCF-7	breast:
7	chr1:186648045..186648752-chr5:44808698..44809493,2	Hela-S3	cervix:
8	chr1:186649389..186649931-chr12:46766242..46766816,2	Hela-S3	cervix:
9	chr1:186651918..186653014-chr1:186954800..186955506,3	MCF-7	breast:
10	chr1:186677076..186679314-chr1:186708413..186710539,2	MCF-7	breast:
11	chr1:186641962..186644518-chr1:186645424..186648177,2	MCF-7	breast:
12	chr1:186641962..186644518-chr1:186645424..186648177,2	MCF-7	breast:
13	chr1:186646968..186647478-chr19:12903470..12904362,2	Hela-S3	cervix:
14	chr1:186686238..186686960-chr19:16606417..16606991,2	Hela-S3	cervix:
15	chr1:186648853..186649464-chr12:6875294..6876196,2	Hela-S3	cervix:
16	chr1:186691511..186692410-chr1:186775381..186776252,3	MCF-7	breast:
17	chr1:186649823..186650323-chr11:33182661..33183212,2	Hela-S3	cervix:
18	chr1:186686366..186688397-chr1:186690358..186692052,2	MCF-7	breast:
19	chr1:186650209..186651033-chr6:89789993..89790875,2	Hela-S3	cervix:
20	chr1:186451532..186452512-chr1:186651563..186652631,6	MCF-7	breast:
21	chr1:186679169..186680841-chr1:186782963..186785926,2	K562	blood:
22	chr1:186651621..186652400-chr1:186954720..186955299,2	MCF-7	breast:
23	chr1:186574544..186575451-chr1:186651610..186652900,9	MCF-7	breast:
24	chr1:186649939..186650766-chr9:12429991..12430491,2	Hela-S3	cervix:
25	chr1:186638420..186641354-chr1:186642011..186644498,2	MCF-7	breast:
26	chr1:186451542..186452284-chr1:186651474..186652178,3	MCF-7	breast:
27	chr1:186649431..186649985-chr16:2014442..2015162,2	Hela-S3	cervix:
28	chr1:186686366..186688397-chr1:186690358..186692052,2	MCF-7	breast:

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-PLA2G4A-10	chr1:186649754-186650578	ENSG00000273129.1

No.	miRNA target gene	miRNA name	Chromosome Location
1	PTGS2	hsa-miR-26b-5p	chr1:186643221-186643239
2	PTGS2	hsa-miR-132-3p	chr1:186642734-186642756
3	PTGS2	hsa-miR-137	chr1:186642567-186642589
4	PTGS2	hsa-miR-26b-5p	chr1:186643227-186643220

Variant related genes	Relation type
ENSG00000273129	TF binding region
PTGS2	TF binding region
ENSG00000273129	CpG island
PTGS2	CpG island
ENSG00000155111	chromatin interactions
ENSG00000196331	chromatin interactions
ENSG00000140988	chromatin interactions
ENSG00000112996	chromatin interactions
ENSG00000251141	chromatin interactions
ENSG00000247151	chromatin interactions
ENSG00000233224	chromatin interactions
ENSG00000271931	chromatin interactions
ENSG00000197153	chromatin interactions
ENSG00000159335	chromatin interactions
ENSG00000269058	chromatin interactions
ENSG00000255198	chromatin interactions
ENSG00000134294	chromatin interactions
ENSG00000130522	chromatin interactions
ENSG00000146278	chromatin interactions
ENSG00000176102	chromatin interactions

Extended variants
information (count: 1553 )
Associated
traits (count: 86 )

Variant overlapped rSNPs/rCNVs (count:1553 , 50 per page) page: 1 2 3 4 5 6 7 ... 32

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs2206593	chr1:186642429-186642430	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
2	rs530994465	chr1:186642461-186642462	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs202215792	chr1:186642509-186642510	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs200400596	chr1:186642545-186642546	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs201467945	chr1:186642547-186642548	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs201923503	chr1:186642555-186642556	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs200351050	chr1:186642559-186642560	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs201157576	chr1:186642566-186642567	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs199657133	chr1:186642593-186642594	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs193144472	chr1:186642604-186642605	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs201588251	chr1:186642606-186642607	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs199740165	chr1:186642615-186642616	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs200717726	chr1:186642616-186642617	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs201688357	chr1:186642623-186642624	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs199858950	chr1:186642626-186642627	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs1051897	chr1:186642670-186642671	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs200795899	chr1:186642676-186642677	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs4648294	chr1:186642688-186642689	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs201782015	chr1:186642724-186642725	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs534809418	chr1:186642736-186642737	Weak transcription Strong transcription	miRNA target site	1 gene(s)	Overlapped CNVs	n/a
21	rs115973952	chr1:186642744-186642745	Weak transcription Strong transcription	miRNA target site	1 gene(s)	Overlapped CNVs	n/a
22	rs201104814	chr1:186642772-186642773	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs4648293	chr1:186642807-186642808	Weak transcription Strong transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
24	rs3134589	chr1:186642822-186642823	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs538701450	chr1:186642838-186642839	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs4648292	chr1:186642856-186642857	Weak transcription Strong transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
27	rs201083629	chr1:186642858-186642859	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs201745115	chr1:186642867-186642868	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs200207384	chr1:186642883-186642884	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs201014322	chr1:186642889-186642890	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs138908498	chr1:186642891-186642892	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs201842290	chr1:186642904-186642905	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs200416386	chr1:186642950-186642951	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs536428606	chr1:186642954-186642955	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs201484578	chr1:186642978-186642979	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs199506254	chr1:186642986-186642987	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs5276	chr1:186642987-186642988	Weak transcription Strong transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
38	rs201419014	chr1:186642996-186642997	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs572939749	chr1:186643006-186643007	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs13306031	chr1:186643035-186643036	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs199629276	chr1:186643052-186643053	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs5275	chr1:186643058-186643059	Weak transcription Strong transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
43	rs201917851	chr1:186643086-186643087	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs199740331	chr1:186643106-186643107	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs142234315	chr1:186643116-186643117	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs201916655	chr1:186643118-186643119	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs1051896	chr1:186643167-186643168	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs576764583	chr1:186643193-186643194	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs36233646	chr1:186643204-186643205	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs4648291	chr1:186643205-186643206	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:86)

Disease	PMID	Source
Breast cancer	17603634	CNVD
Esophageal squamous carcinoma	21637470	CNVD
HIV/AIDS	22032296	CNVD
Schizophrenia	19415332	CNVD
Autism	22495311	CNVD
Liposarcoma	21253554	CNVD
Burkitt''s lymphoma	18698080	CNVD
Melanoma	18172304	CNVD
Rett syndrome	21593744	CNVD
Cancer	20164919	CNVD
Medulloblastoma	21979893	CNVD
Acute lymphoblastic leukemia	17443227	CNVD
Wilms tumour	21544195	CNVD
Breast cancer	17133270	CNVD
Carcinoma ex pleomorphic adenoma	18828159	CNVD
Non-small cell lung cancer	21044232	CNVD
Cervical cancer	21063398	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	20632083	CNVD
Endometrial cancer	22040021	CNVD
Ewing''s sarcoma	21437220	CNVD
Gastrointestinal stromal cancer	20470368	CNVD
Glioblastoma multiforme	19960244	CNVD
Glioblastoma multiforme	21080181	CNVD
Hepatocellular carcinoma	22174799	CNVD
Medulloblastoma	21292688	CNVD
Phyllodes tumor	17334353	CNVD
Breast cancer	21264507	CNVD
Multiple myeloma	21628407	CNVD
Cancer	16751803	CNVD
Prostate cancer	16705090	CNVD
Neuroblastoma	19435921	CNVD
Breast cancer	17850661	CNVD
Breast cancer	16461572	CNVD
Intracranial tumor	16823260	CNVD
Medulloblastoma	18056178	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Primary mediastinal b-cell lymphoma	17728785	CNVD
Colorectal cancer	16272173	CNVD
Acute lymphoblastic leukemia	21098271	CNVD
Neuroblastoma	21899760	CNVD
Ovarian neoplasms	16753589	CNVD
Glioblastoma multiforme	17002787	CNVD
Breast cancer	21858162	CNVD
Non-small cell lung cancer	21385341	CNVD
Acute lymphoblastic leukemia	21980252	CNVD
Breast cancer	16608533	CNVD
Ewing''s sarcoma	22429812	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Hepatocellular carcinoma	18803288	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Breast cancer	17001317	CNVD
Urothelial carcinoma	21177765	CNVD
Acute myeloid leukemia	21251322	CNVD
Multiple myeloma	17550852	CNVD
Prostate cancer	18632612	CNVD
Acute myeloid leukemia	20729466	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Testicular germ cell tumor	18059402	CNVD
Ependymoma	18628472	CNVD
Leukemia	18628472	CNVD
Neuroblastoma	18923191	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Ewing''s sarcoma	17952124	CNVD
Acute lymphoblastic leukemia	19100363	CNVD
Lung cancer	18438408	CNVD
Breast cancer	21509527	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Metanephric adenoma	20802469	CNVD
Melanoma	20688739	CNVD
small cell lung cancer	20016488	CNVD
Breast cancer	21611746	CNVD
Myelofibrosis	22110671	CNVD
primary effusion lymphomas	17116491	CNVD
Breast cancer	17393978	CNVD
Hepatocellular carcinoma	16750200	CNVD
Barrett''s syndrome	19417022	CNVD
Schizophrenia	19197363	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Breast cancer	17899364	CNVD
Non-small cell lung cancer	19010865	CNVD
Mental retardation	17847001	CNVD
Basal cell lymphoma	17170743	CNVD
Follicular lymphoma	17170743	CNVD

Chromatin state (count:489 , 50 per page) page: 1 2 3 4 5 6 7 ... 10

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:186632800-186649000	Weak transcription	Fetal Lung	lung
2	chr1:186633200-186642800	Weak transcription	NHEK	skin
3	chr1:186633200-186643600	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
4	chr1:186639000-186643600	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
5	chr1:186639400-186645000	Weak transcription	NHDF-Ad	bronchial
6	chr1:186639400-186648400	Weak transcription	Primary hematopoietic stem cells	blood
7	chr1:186639600-186644600	Weak transcription	Small Intestine	intestine
8	chr1:186640200-186643200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
9	chr1:186640200-186643600	Weak transcription	Stomach Smooth Muscle	stomach
10	chr1:186640200-186645000	Strong transcription	Primary neutrophils fromperipheralblood	blood
11	chr1:186640200-186646600	Strong transcription	Monocytes-CD14+_RO01746	blood
12	chr1:186640200-186647800	Strong transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
13	chr1:186640200-186647800	Strong transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
14	chr1:186640800-186647800	Strong transcription	Primary monocytes fromperipheralblood	blood
15	chr1:186640800-186648000	Weak transcription	Rectal Mucosa Donor 29	rectum
16	chr1:186640800-186648200	Weak transcription	Brain Angular Gyrus	brain
17	chr1:186640800-186649200	Weak transcription	Sigmoid Colon	Sigmoid Colon
18	chr1:186641400-186645000	Strong transcription	Breast Myoepithelial Primary Cells	Breast
19	chr1:186641400-186645400	Strong transcription	HUVEC	blood vessel
20	chr1:186641400-186646000	Strong transcription	NH-A	brain
21	chr1:186641400-186647600	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
22	chr1:186641600-186643600	Weak transcription	Primary hematopoietic stem cells short term culture	blood
23	chr1:186641600-186647400	Strong transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
24	chr1:186641600-186648400	Weak transcription	NHLF	lung
25	chr1:186641800-186643400	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
26	chr1:186641800-186643400	Weak transcription	Fetal Muscle Leg	muscle
27	chr1:186641800-186643600	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
28	chr1:186641800-186646400	Strong transcription	Hela-S3	cervix
29	chr1:186641800-186648400	Weak transcription	Fetal Muscle Trunk	muscle
30	chr1:186642000-186642800	Strong transcription	Duodenum Smooth Muscle	Duodenum
31	chr1:186642000-186643600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
32	chr1:186642000-186643600	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
33	chr1:186642000-186643600	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
34	chr1:186642000-186643600	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
35	chr1:186642000-186643600	Weak transcription	Adipose Nuclei	Adipose
36	chr1:186642000-186643600	Weak transcription	Aorta	Aorta
37	chr1:186642000-186643600	Weak transcription	Lung	lung
38	chr1:186642000-186645200	Weak transcription	Rectal Smooth Muscle	rectum
39	chr1:186642000-186645200	Weak transcription	Osteobl	bone
40	chr1:186642000-186646800	Strong transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
41	chr1:186642200-186642800	Strong transcription	A549	lung
42	chr1:186642200-186643800	Weak transcription	Fetal Stomach	stomach
43	chr1:186642200-186645600	Weak transcription	Spleen	Spleen
44	chr1:186642200-186647000	Strong transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
45	chr1:186642200-186647800	Strong transcription	HMEC	breast
46	chr1:186642200-186649200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
47	chr1:186642200-186649200	Weak transcription	Placenta Amnion	Placenta Amnion
48	chr1:186642400-186645800	Strong transcription	Colon Smooth Muscle	Colon
49	chr1:186642400-186649200	Weak transcription	Gastric	stomach
50	chr1:186642600-186648200	Weak transcription	Fetal Intestine Small	intestine

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Variant report

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