Variant report

Variant	nsv548478
Chromosome Location	chr1:188760628-188870483
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:249)
CpG islands
(count:122)
Chromatin interactive
region (count:12)
LncRNA
region (count:3)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:249 , 50 per page) page: 1 2 3 4 5

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ATF1	chr1:188818322-188818328	K562	blood:	n/a	n/a
2	BRCA1	chr1:188857430-188857935	Hela-S3	cervix:	n/a	n/a
3	CEBPB	chr1:188795984-188796250	A549	lung:	n/a	chr1:188796129-188796140
4	CEBPB	chr1:188845139-188845339	HepG2	liver:	n/a	chr1:188845215-188845226 chr1:188845214-188845227
5	CEBPB	chr1:188795959-188796302	IMR90	lung:	n/a	chr1:188796129-188796140
6	CEBPB	chr1:188861151-188861446	A549	lung:	n/a	chr1:188861298-188861309
7	CEBPB	chr1:188794656-188794952	HepG2	liver:	n/a	chr1:188794818-188794829
8	CEBPB	chr1:188795967-188796275	HepG2	liver:	n/a	chr1:188796129-188796140
9	CEBPB	chr1:188857286-188858045	Hela-S3	cervix:	n/a	n/a
10	CEBPB	chr1:188794647-188794936	Hela-S3	cervix:	n/a	chr1:188794818-188794829
11	CEBPB	chr1:188794612-188794962	MCF-7	breast:	n/a	chr1:188794818-188794829
12	CEBPB	chr1:188794707-188794885	A549	lung:	n/a	chr1:188794818-188794829
13	CEBPB	chr1:188861237-188861445	H1-hESC	embryonic stem cell:	n/a	chr1:188861298-188861309
14	CEBPB	chr1:188794594-188795042	A549	lung:	n/a	chr1:188794818-188794829
15	CEBPB	chr1:188857462-188857804	IMR90	lung:	n/a	n/a
16	CEBPB	chr1:188861142-188861475	Hela-S3	cervix:	n/a	chr1:188861298-188861309
17	CEBPB	chr1:188833745-188833994	HepG2	liver:	n/a	n/a
18	CEBPB	chr1:188794566-188795108	MCF-7	breast:	n/a	chr1:188794818-188794829
19	CEBPB	chr1:188861137-188861478	HepG2	liver:	n/a	chr1:188861298-188861309
20	CEBPB	chr1:188854862-188855129	HepG2	liver:	n/a	chr1:188854961-188854974 chr1:188854963-188854974 chr1:188854961-188854972 chr1:188854961-188854974
21	CEBPB	chr1:188861120-188861477	IMR90	lung:	n/a	chr1:188861298-188861309
22	CEBPB	chr1:188861165-188861434	K562	blood:	n/a	chr1:188861298-188861309
23	CEBPB	chr1:188795978-188796298	K562	blood:	n/a	chr1:188796129-188796140
24	CHD2	chr1:188857543-188857987	Hela-S3	cervix:	n/a	n/a
25	CTCF	chr1:188782964-188783003	GM13976	blood:	n/a	n/a
26	CTCF	chr1:188810772-188810833	GM20000	blood:	n/a	n/a
27	CTCF	chr1:188827164-188827243	GM10266	blood:	n/a	n/a
28	CTCF	chr1:188803528-188803624	MCF-7	breast:	n/a	n/a
29	CTCF	chr1:188847422-188847457	Kidney_OC	kidney:	n/a	n/a
30	CTCF	chr1:188844030-188844110	GM13976	blood:	n/a	n/a
31	CTCF	chr1:188866946-188866995	Lung_OC	lung:	n/a	n/a
32	E2F4	chr1:188777985-188778029	MCF10A-Er-Src	breast:	n/a	n/a
33	E2F4	chr1:188859185-188859360	MCF10A-Er-Src	breast:	n/a	n/a
34	E2F4	chr1:188863616-188863912	MCF10A-Er-Src	breast:	n/a	n/a
35	E2F4	chr1:188794664-188794859	MCF10A-Er-Src	breast:	n/a	n/a
36	EP300	chr1:188857339-188858091	Hela-S3	cervix:	n/a	n/a
37	EP300	chr1:188786968-188787348	SK-N-SH_RA	brain:	n/a	n/a
38	EP300	chr1:188786962-188787298	SK-N-SH_RA	brain:	n/a	n/a
39	EP300	chr1:188857328-188858092	SK-N-SH	brain:	n/a	n/a
40	EP300	chr1:188862410-188863143	MCF-7	breast:	n/a	n/a
41	EP300	chr1:188791337-188791635	SK-N-SH_RA	brain:	n/a	n/a
42	EP300	chr1:188862368-188862984	MCF-7	breast:	n/a	n/a
43	EP300	chr1:188780841-188781974	SK-N-SH	brain:	n/a	n/a
44	EP300	chr1:188789893-188790286	SK-N-SH_RA	brain:	n/a	n/a
45	EP300	chr1:188857333-188857989	SK-N-SH_RA	brain:	n/a	n/a
46	EP300	chr1:188857367-188857999	SK-N-SH_RA	brain:	n/a	n/a
47	EP300	chr1:188786458-188787854	SK-N-SH	brain:	n/a	n/a
48	FOS	chr1:188812409-188812715	MCF10A-Er-Src	breast:	n/a	chr1:188812582-188812591 chr1:188812581-188812593 chr1:188812581-188812592 chr1:188812583-188812590 chr1:188812584-188812595 chr1:188812583-188812591 chr1:188812582-188812592
49	FOS	chr1:188857594-188857890	MCF10A-Er-Src	breast:	n/a	n/a
50	FOS	chr1:188794378-188795027	MCF10A-Er-Src	breast:	n/a	n/a

(count:122 , 50 per page) page: 1 2 3

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr1:188826889-188826939	SK-N-SH	brain:	n/a
2	chr1:188826823-188826873	U87	brain:	n/a
3	chr1:188826823-188826873	HCPEpiC	choroid plexus:	n/a
4	chr1:188826889-188826939	Caco-2	colon:	n/a
5	chr1:188826889-188826939	HPAEpiC	pulmonary alveolar:	n/a
6	chr1:188826889-188826939	ECC-1	luminal epithelium:	n/a
7	chr1:188826889-188826939	U87	brain:	n/a
8	chr1:188826889-188826939	K562	blood:	n/a
9	chr1:188826823-188826873	PANC-1	pancreas:	n/a
10	chr1:188826823-188826873	HPAEpiC	pulmonary alveolar:	n/a
11	chr1:188826889-188826939	ProgFib	skin:	n/a
12	chr1:188826823-188826873	K562	blood:	n/a
13	chr1:188826889-188826939	Hepatocyte	liver:	n/a
14	chr1:188826889-188826939	IMR90	lung:	fetal
15	chr1:188826823-188826873	ovcar-3	ovarian:	n/a
16	chr1:188826889-188826939	NB4	blood:	n/a
17	chr1:188826889-188826939	NHDF-neo	bronchial:	n/a
18	chr1:188826823-188826873	Hepatocyte	liver:	n/a
19	chr1:188826823-188826873	HUVEC	blood vessel:	n/a
20	chr1:188826823-188826873	LNCaP	prostate:	n/a
21	chr1:188826823-188826873	NH-A	brain:	n/a
22	chr1:188826823-188826873	HL-60	blood:	n/a
23	chr1:188826823-188826873	AG04449	skin:	fetal
24	chr1:188826823-188826873	GM12878	blood:	n/a
25	chr1:188826889-188826939	GM12892	blood:	n/a
26	chr1:188826823-188826873	PrEC	prostate:	n/a
27	chr1:188826889-188826939	GM19239	blood:	n/a
28	chr1:188826889-188826939	T-47D	breast:	n/a
29	chr1:188826823-188826873	SK-N-MC	brain:	n/a
30	chr1:188826889-188826939	AG04450	lung:	fetal
31	chr1:188826823-188826873	HEEpiC	esophagus:	n/a
32	chr1:188826889-188826939	NT2-D1	testis:	n/a
33	chr1:188826889-188826939	HCF	heart:	n/a
34	chr1:188826889-188826939	PrEC	prostate:	n/a
35	chr1:188826889-188826939	CMK	blood:	n/a
36	chr1:188826889-188826939	Hela-S3	cervix:	n/a
37	chr1:188826889-188826939	LNCaP	prostate:	n/a
38	chr1:188826823-188826873	GM06990	blood:	n/a
39	chr1:188826889-188826939	HCM	heart:	n/a
40	chr1:188826889-188826939	HCPEpiC	choroid plexus:	n/a
41	chr1:188826889-188826939	HEK293	kidney:	embryo
42	chr1:188826889-188826939	AG09319	gingival:	n/a
43	chr1:188826823-188826873	ProgFib	skin:	n/a
44	chr1:188826889-188826939	HRCEpiC	kidney:	n/a
45	chr1:188826823-188826873	HRE	kidney:	n/a
46	chr1:188826823-188826873	MCF-7	breast:	n/a
47	chr1:188826823-188826873	T-47D	breast:	n/a
48	chr1:188826889-188826939	HRE	kidney:	n/a
49	chr1:188826823-188826873	HepG2	liver:	n/a
50	chr1:188826889-188826939	HMEC	breast:	n/a

(count:12 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr1:188846061..188848491-chr1:188851171..188853585,2	MCF-7	breast:
2	chr1:188773169..188775117-chr1:188777054..188779991,2	K562	blood:
3	chr1:188773169..188775117-chr1:188777054..188779991,2	K562	blood:
4	chr1:188753407..188755924-chr1:188760366..188763242,2	K562	blood:
5	chr1:188846061..188848491-chr1:188851171..188853585,2	MCF-7	breast:
6	chr1:188866159..188868933-chr1:188870871..188872423,2	MCF-7	breast:
7	chr1:188762438..188765055-chr1:189455240..189458166,2	MCF-7	breast:
8	chr1:188789143..188792283-chr1:188793641..188795538,3	K562	blood:
9	chr1:188788862..188791265-chr1:188817309..188819818,2	MCF-7	breast:
10	chr1:188401580..188402198-chr1:188862429..188863519,3	MCF-7	breast:
11	chr1:188789143..188792283-chr1:188793641..188795538,3	K562	blood:
12	chr1:188788862..188791265-chr1:188817309..188819818,2	MCF-7	breast:

(count:3 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-FAM5C-2	chr1:188838608-188838879	XLOC_001129
2	lnc-PLA2G4A-17	chr1:188860643-188860786	refGeneNc_416_NR_033922
3	lnc-FAM5C-2	chr1:188856372-188856565	XLOC_001129

No data

Variant related genes	Relation type
ENSG00000238054	TF binding region
LINC01035	TF binding region
ENSG00000238054	CpG island
LINC01035	CpG island
KIAA0494	miRNA target sites

Extended variants
information (count: 871 )
Associated
traits (count: 87 )

Variant overlapped rSNPs/rCNVs (count:871 , 50 per page) page: 1 2 3 4 5 6 7 ... 18

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs192483393	chr1:188769007-188769008	Enhancers	n/a	n/a	Overlapped CNVs	n/a
2	rs376970380	chr1:188769008-188769009	Enhancers	n/a	n/a	Overlapped CNVs	n/a
3	rs565427888	chr1:188769023-188769024	Enhancers	n/a	n/a	Overlapped CNVs	n/a
4	rs532351621	chr1:188769025-188769026	Enhancers	n/a	n/a	Overlapped CNVs	n/a
5	rs534620480	chr1:188769030-188769031	Enhancers	n/a	n/a	Overlapped CNVs	n/a
6	rs76853922	chr1:188769035-188769036	Enhancers	n/a	n/a	Overlapped CNVs	n/a
7	rs116005759	chr1:188769043-188769044	Enhancers	n/a	n/a	Overlapped CNVs	n/a
8	rs533005357	chr1:188769047-188769048	Enhancers	n/a	n/a	Overlapped CNVs	n/a
9	rs12048577	chr1:188769057-188769058	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
10	rs372798947	chr1:188769089-188769090	Enhancers	n/a	n/a	Overlapped CNVs	n/a
11	rs567515211	chr1:188769155-188769156	Enhancers	n/a	n/a	Overlapped CNVs	n/a
12	rs536443579	chr1:188769186-188769187	Enhancers	n/a	n/a	Overlapped CNVs	n/a
13	rs551582934	chr1:188769205-188769206	Enhancers	n/a	n/a	Overlapped CNVs	n/a
14	rs200109036	chr1:188769206-188769207	Enhancers	n/a	n/a	Overlapped CNVs	n/a
15	rs553516068	chr1:188769214-188769215	Enhancers	n/a	n/a	Overlapped CNVs	n/a
16	rs78626788	chr1:188769223-188769224	Enhancers	n/a	n/a	Overlapped CNVs	n/a
17	rs79815986	chr1:188769224-188769225	Enhancers	n/a	n/a	Overlapped CNVs	n/a
18	rs545404854	chr1:188769241-188769242	Enhancers	n/a	n/a	Overlapped CNVs	n/a
19	rs376287594	chr1:188769255-188769256	Enhancers	n/a	n/a	Overlapped CNVs	n/a
20	rs558643829	chr1:188769310-188769311	Enhancers	n/a	n/a	Overlapped CNVs	n/a
21	rs370671822	chr1:188769316-188769317	Enhancers	n/a	n/a	Overlapped CNVs	n/a
22	rs559877943	chr1:188769321-188769322	Enhancers	n/a	n/a	Overlapped CNVs	n/a
23	rs142878972	chr1:188769322-188769323	Enhancers	n/a	n/a	Overlapped CNVs	n/a
24	rs544604947	chr1:188769369-188769370	Enhancers	n/a	n/a	Overlapped CNVs	n/a
25	rs561242021	chr1:188769388-188769389	Enhancers	n/a	n/a	Overlapped CNVs	n/a
26	rs530269488	chr1:188769396-188769397	Enhancers	n/a	n/a	Overlapped CNVs	n/a
27	rs73068714	chr1:188769410-188769411	Enhancers	n/a	n/a	Overlapped CNVs	n/a
28	rs559026275	chr1:188769430-188769431	Enhancers	n/a	n/a	Overlapped CNVs	n/a
29	rs79244800	chr1:188769437-188769438	Enhancers	n/a	n/a	Overlapped CNVs	n/a
30	rs146086027	chr1:188769446-188769447	Enhancers	n/a	n/a	Overlapped CNVs	n/a
31	rs12048701	chr1:188769451-188769452	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
32	rs12059914	chr1:188769467-188769468	Enhancers	n/a	n/a	Overlapped CNVs	n/a
33	rs148459447	chr1:188769474-188769475	Enhancers	n/a	n/a	Overlapped CNVs	n/a
34	rs550935843	chr1:188769484-188769485	Enhancers	n/a	n/a	Overlapped CNVs	n/a
35	rs114181392	chr1:188769552-188769553	Enhancers	n/a	n/a	Overlapped CNVs	n/a
36	rs531325988	chr1:188769595-188769596	Enhancers	n/a	n/a	Overlapped CNVs	n/a
37	rs61832912	chr1:188769634-188769635	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
38	rs183108051	chr1:188769662-188769663	Enhancers	n/a	n/a	Overlapped CNVs	n/a
39	rs571368728	chr1:188769663-188769664	Enhancers	n/a	n/a	Overlapped CNVs	n/a
40	rs141720759	chr1:188769705-188769706	Enhancers	n/a	n/a	Overlapped CNVs	n/a
41	rs74138145	chr1:188769730-188769731	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
42	rs558986700	chr1:188769770-188769771	Enhancers	n/a	n/a	Overlapped CNVs	n/a
43	rs75173652	chr1:188769789-188769790	Enhancers	n/a	n/a	Overlapped CNVs	n/a
44	rs552481852	chr1:188791033-188791034	Active TSS	n/a	n/a	Overlapped CNVs	n/a
45	rs547308465	chr1:188791037-188791038	Active TSS	n/a	n/a	Overlapped CNVs	n/a
46	rs570689742	chr1:188791047-188791048	Active TSS	n/a	n/a	Overlapped CNVs	n/a
47	rs543483244	chr1:188791088-188791089	Active TSS	n/a	n/a	Overlapped CNVs	n/a
48	rs539335912	chr1:188791092-188791093	Active TSS	n/a	n/a	Overlapped CNVs	n/a
49	rs73068732	chr1:188791136-188791137	Active TSS	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
50	rs569745749	chr1:188791142-188791143	Active TSS	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:87)

Disease	PMID	Source
Breast cancer	17603634	CNVD
Esophageal squamous carcinoma	21637470	CNVD
HIV/AIDS	22032296	CNVD
Schizophrenia	19415332	CNVD
Autism	22495311	CNVD
Liposarcoma	21253554	CNVD
Burkitt''s lymphoma	18698080	CNVD
Melanoma	18172304	CNVD
Rett syndrome	21593744	CNVD
Cancer	20164919	CNVD
Medulloblastoma	21979893	CNVD
Acute lymphoblastic leukemia	17443227	CNVD
Wilms tumour	21544195	CNVD
Breast cancer	17133270	CNVD
Carcinoma ex pleomorphic adenoma	18828159	CNVD
Non-small cell lung cancer	21044232	CNVD
Cervical cancer	21063398	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	20632083	CNVD
Endometrial cancer	22040021	CNVD
Ewing''s sarcoma	21437220	CNVD
Gastrointestinal stromal cancer	20470368	CNVD
Glioblastoma multiforme	19960244	CNVD
Glioblastoma multiforme	21080181	CNVD
Hepatocellular carcinoma	22174799	CNVD
Medulloblastoma	21292688	CNVD
Phyllodes tumor	17334353	CNVD
Breast cancer	21264507	CNVD
Multiple myeloma	21628407	CNVD
Cancer	16751803	CNVD
Prostate cancer	16705090	CNVD
Neuroblastoma	19435921	CNVD
Breast cancer	17850661	CNVD
Breast cancer	16461572	CNVD
Intracranial tumor	16823260	CNVD
Medulloblastoma	18056178	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Primary mediastinal b-cell lymphoma	17728785	CNVD
Colorectal cancer	16272173	CNVD
Acute lymphoblastic leukemia	21098271	CNVD
Neuroblastoma	21899760	CNVD
Ovarian neoplasms	16753589	CNVD
Glioblastoma multiforme	17002787	CNVD
Breast cancer	21858162	CNVD
Non-small cell lung cancer	21385341	CNVD
Acute lymphoblastic leukemia	21980252	CNVD
Breast cancer	16608533	CNVD
Ewing''s sarcoma	22429812	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Hepatocellular carcinoma	18803288	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Breast cancer	17001317	CNVD
Acute myeloid leukemia	21251322	CNVD
Multiple myeloma	17550852	CNVD
Prostate cancer	18632612	CNVD
Acute myeloid leukemia	20729466	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Testicular germ cell tumor	18059402	CNVD
Ependymoma	18628472	CNVD
Leukemia	18628472	CNVD
Neuroblastoma	18923191	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Ewing''s sarcoma	17952124	CNVD
Acute lymphoblastic leukemia	19100363	CNVD
Lung cancer	18438408	CNVD
Breast cancer	21509527	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Metanephric adenoma	20802469	CNVD
Melanoma	20688739	CNVD
small cell lung cancer	20016488	CNVD
Breast cancer	21611746	CNVD
Myelofibrosis	22110671	CNVD
primary effusion lymphomas	17116491	CNVD
Breast cancer	17393978	CNVD
Hepatocellular carcinoma	16750200	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Breast cancer	17899364	CNVD
Non-small cell lung cancer	19010865	CNVD
Mental retardation	17847001	CNVD
Basal cell lymphoma	17170743	CNVD
Follicular lymphoma	17170743	CNVD
Trisomy 5 syndrome	21098271	CNVD
early-passage human iPS cells	21368824	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Pancreatic cancer	17952125	CNVD

Chromatin state (count:45 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:188769000-188769600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
2	chr1:188769000-188769800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
3	chr1:188791000-188791400	Active TSS	Fetal Muscle Leg	muscle
4	chr1:188791200-188792000	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
5	chr1:188791200-188792200	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
6	chr1:188791400-188791600	Enhancers	ES-I3 Cell Line	embryonic stem cell
7	chr1:188791400-188791800	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
8	chr1:188791400-188791800	Enhancers	HUES48 Cell Line	embryonic stem cell
9	chr1:188791400-188791800	Enhancers	HUES6 Cell Line	embryonic stem cell
10	chr1:188791400-188791800	Enhancers	iPS-15b Cell Line	embryonic stem cell
11	chr1:188791400-188792000	Enhancers	Fetal Muscle Leg	muscle
12	chr1:188791600-188792000	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
13	chr1:188791800-188793200	Weak transcription	HUES6 Cell Line	embryonic stem cell
14	chr1:188793200-188793600	Enhancers	HUES6 Cell Line	embryonic stem cell
15	chr1:188793400-188793800	Enhancers	ES-I3 Cell Line	embryonic stem cell
16	chr1:188812200-188812600	Enhancers	iPS-15b Cell Line	embryonic stem cell
17	chr1:188812200-188813000	Enhancers	HUES48 Cell Line	embryonic stem cell
18	chr1:188812400-188813000	Enhancers	ES-I3 Cell Line	embryonic stem cell
19	chr1:188812800-188813000	Enhancers	Pancreas	Pancrea
20	chr1:188813000-188815600	Weak transcription	Pancreas	Pancrea
21	chr1:188815600-188816000	ZNF genes & repeats	Pancreas	Pancrea
22	chr1:188815800-188816000	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
23	chr1:188819600-188820400	Enhancers	Pancreatic Islets	Pancreatic Islet
24	chr1:188820400-188821400	Active TSS	Pancreatic Islets	Pancreatic Islet
25	chr1:188820600-188820800	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
26	chr1:188823800-188824200	Enhancers	iPS-20b Cell Line	embryonic stem cell
27	chr1:188823800-188824600	Enhancers	iPS-15b Cell Line	embryonic stem cell
28	chr1:188824200-188824600	Enhancers	HUES6 Cell Line	embryonic stem cell
29	chr1:188826600-188826800	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
30	chr1:188826600-188827000	ZNF genes & repeats	iPS DF 19.11 Cell Line	embryonic stem cell
31	chr1:188826600-188827200	ZNF genes & repeats	ES-UCSF4 Cell Line	embryonic stem cell
32	chr1:188826800-188827000	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
33	chr1:188827000-188827200	ZNF genes & repeats	H1 Derived Mesenchymal Stem Cells	ES cell derived
34	chr1:188835000-188835400	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
35	chr1:188846600-188847200	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
36	chr1:188846600-188847600	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
37	chr1:188854400-188855000	Enhancers	Hela-S3	cervix
38	chr1:188855000-188855800	Weak transcription	Hela-S3	cervix
39	chr1:188855800-188856400	Enhancers	Hela-S3	cervix
40	chr1:188856400-188857600	Flanking Active TSS	Hela-S3	cervix
41	chr1:188857200-188858000	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
42	chr1:188857600-188859200	Weak transcription	Hela-S3	cervix
43	chr1:188859200-188859600	Enhancers	Hela-S3	cervix
44	chr1:188869600-188869800	Enhancers	Fetal Adrenal Gland	Adrenal Gland
45	chr1:188869800-188872000	Weak transcription	Fetal Adrenal Gland	Adrenal Gland

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links