Variant report

Variant nsv548738
Chromosome Location chr1:195912579-196119310
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:327 , 50 per page) page: 1 2 3 4 5 6 7
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:195915600-195916000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
2 chr1:195917200-195918000 ZNF genes & repeats iPS DF 19.11 Cell Line embryonic stem cell
3 chr1:195923600-195924400 Enhancers Right Atrium heart
4 chr1:195923800-195924600 Enhancers Fetal Lung lung
5 chr1:195924600-195925200 Weak transcription Fetal Lung lung
6 chr1:195925200-195925400 Enhancers Fetal Lung lung
7 chr1:195925600-195925800 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
8 chr1:195926000-195927000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
9 chr1:195926000-195927600 Enhancers iPS-18 Cell Line embryonic stem cell
10 chr1:195926200-195926600 Enhancers ES-WA7 Cell Line embryonic stem cell
11 chr1:195926200-195926600 Enhancers iPS-15b Cell Line embryonic stem cell
12 chr1:195926200-195926600 Enhancers iPS-20b Cell Line embryonic stem cell
13 chr1:195926200-195927200 Enhancers HUES48 Cell Line embryonic stem cell
14 chr1:195926400-195926600 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
15 chr1:195926600-195929800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
16 chr1:195927000-195927800 Enhancers NHEK skin
17 chr1:195927000-195928200 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
18 chr1:195927200-195927800 Enhancers HMEC breast
19 chr1:195927200-195929200 Weak transcription HUES48 Cell Line embryonic stem cell
20 chr1:195927600-195929600 Weak transcription iPS-18 Cell Line embryonic stem cell
21 chr1:195928200-195933800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
22 chr1:195929200-195930000 Enhancers HUES48 Cell Line embryonic stem cell
23 chr1:195929600-195930000 Enhancers iPS-18 Cell Line embryonic stem cell
24 chr1:195929800-195930000 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
25 chr1:195929800-195930200 Enhancers ES-I3 Cell Line embryonic stem cell
26 chr1:195930000-195931000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
27 chr1:195933800-195935000 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
28 chr1:195933800-195935200 Enhancers NHEK skin
29 chr1:195934000-195934200 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
30 chr1:195934200-195934400 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
31 chr1:195934200-195935000 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
32 chr1:195934200-195935200 Enhancers K562 blood
33 chr1:195934400-195934600 Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
34 chr1:195934600-195934800 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
35 chr1:195934600-195935000 Enhancers Fetal Muscle Leg muscle
36 chr1:195934800-195935400 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
37 chr1:195935000-195940600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
38 chr1:195940600-195941600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
39 chr1:195941200-195941600 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
40 chr1:195948800-195949400 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
41 chr1:195949000-195949200 Enhancers NHEK skin
42 chr1:195949000-195949400 Enhancers HMEC breast
43 chr1:195949200-195949400 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
44 chr1:195949200-195950600 Weak transcription NHEK skin
45 chr1:195949400-195950000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
46 chr1:195949400-195950600 Weak transcription HMEC breast
47 chr1:195949400-195950800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
48 chr1:195950000-195950800 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
49 chr1:195950600-195951400 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
50 chr1:195950600-195951400 Enhancers HMEC breast

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