Variant report

Variant	nsv548750
Chromosome Location	chr1:196711067-196867233
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr1:196712502-196712701	K562	blood:	n/a	n/a
2	ARID3A	chr1:196856986-196857227	HepG2	liver:	n/a	n/a
3	BACH1	chr1:196866267-196866431	H1-hESC	embryonic stem cell:	n/a	n/a
4	BATF	chr1:196857035-196857206	GM12878	blood:	n/a	n/a
5	BATF	chr1:196856972-196857380	GM12878	blood:	n/a	chr1:196857241-196857249
6	BATF	chr1:196743800-196744098	GM12878	blood:	n/a	chr1:196743977-196743985
7	BCL11A	chr1:196856976-196857372	GM12878	blood:	n/a	n/a
8	CBX3	chr1:196855726-196856081	K562	blood:	n/a	n/a
9	CBX3	chr1:196855776-196855984	K562	blood:	n/a	n/a
10	CEBPB	chr1:196825838-196826029	H1-hESC	embryonic stem cell:	n/a	n/a
11	CEBPB	chr1:196825893-196826006	K562	blood:	n/a	n/a
12	CEBPB	chr1:196848022-196848331	HepG2	liver:	n/a	chr1:196848177-196848188
13	CEBPB	chr1:196856906-196857273	HepG2	liver:	n/a	chr1:196857077-196857088 chr1:196857110-196857123 chr1:196857112-196857123
14	CEBPB	chr1:196848041-196848299	Hela-S3	cervix:	n/a	chr1:196848177-196848188
15	CEBPB	chr1:196792658-196792868	A549	lung:	n/a	chr1:196792695-196792706 chr1:196792696-196792707 chr1:196792695-196792708 chr1:196792826-196792839 chr1:196792697-196792706
16	CEBPB	chr1:196792559-196792845	IMR90	lung:	n/a	chr1:196792695-196792706 chr1:196792696-196792707 chr1:196792695-196792708 chr1:196792826-196792839 chr1:196792697-196792706
17	CEBPB	chr1:196792584-196792829	HepG2	liver:	n/a	chr1:196792695-196792706 chr1:196792696-196792707 chr1:196792695-196792708 chr1:196792697-196792706
18	CEBPB	chr1:196848074-196848355	IMR90	lung:	n/a	chr1:196848177-196848188
19	CEBPB	chr1:196745101-196745132	IMR90	lung:	n/a	n/a
20	CTCF	chr1:196866720-196866870	AG09309	skin:	n/a	n/a
21	CTCF	chr1:196755888-196755951	MCF-7	breast:	n/a	n/a
22	CTCF	chr1:196797260-196797410	A549	lung:	n/a	n/a
23	CTCF	chr1:196712441-196712682	MCF-7	breast:	n/a	chr1:196712547-196712554 chr1:196712544-196712560 chr1:196712543-196712561 chr1:196712545-196712566
24	CTCF	chr1:196748340-196748490	GM12878	blood:	n/a	n/a
25	CTCF	chr1:196712522-196712528	GM10248	blood:	n/a	n/a
26	CTCF	chr1:196712520-196712670	GM12872	blood:	n/a	chr1:196712547-196712554 chr1:196712544-196712560 chr1:196712543-196712561 chr1:196712545-196712566
27	CTCF	chr1:196712480-196712630	GM12867	blood:	n/a	chr1:196712547-196712554 chr1:196712544-196712560 chr1:196712543-196712561 chr1:196712545-196712566
28	CTCF	chr1:196712520-196712670	HUVEC	blood vessel:	n/a	chr1:196712547-196712554 chr1:196712544-196712560 chr1:196712543-196712561 chr1:196712545-196712566
29	CTCF	chr1:196866700-196866850	SK-N-SH_RA	brain:	n/a	n/a
30	CTCF	chr1:196712436-196712686	LNCaP	prostate:	n/a	chr1:196712547-196712554 chr1:196712544-196712560 chr1:196712543-196712561 chr1:196712545-196712566
31	CTCF	chr1:196712315-196712756	SK-N-SH	brain:	n/a	chr1:196712547-196712554 chr1:196712544-196712560 chr1:196712543-196712561 chr1:196712545-196712566
32	CTCF	chr1:196712600-196712750	RPTEC	kidney:	n/a	n/a
33	CTCF	chr1:196749061-196749076	MCF-7	breast:	n/a	n/a
34	CTCF	chr1:196712540-196712690	HVMF	connective:	n/a	chr1:196712547-196712554 chr1:196712544-196712560 chr1:196712543-196712561 chr1:196712545-196712566
35	CTCF	chr1:196797100-196797250	GM12878	blood:	n/a	chr1:196797163-196797184 chr1:196797161-196797179 chr1:196797165-196797172 chr1:196797162-196797178
36	CTCF	chr1:196797060-196797210	AG10803	skin:	n/a	chr1:196797163-196797184 chr1:196797161-196797179 chr1:196797165-196797172 chr1:196797162-196797178
37	CTCF	chr1:196765378-196765399	MCF-7	breast:	n/a	n/a
38	CTCF	chr1:196797120-196797270	AG04449	skin:	n/a	chr1:196797163-196797184 chr1:196797161-196797179 chr1:196797165-196797172 chr1:196797162-196797178
39	CTCF	chr1:196797100-196797250	Hela-S3	cervix:	n/a	chr1:196797163-196797184 chr1:196797161-196797179 chr1:196797165-196797172 chr1:196797162-196797178
40	CTCF	chr1:196712520-196712670	SK-N-SH_RA	brain:	n/a	chr1:196712547-196712554 chr1:196712544-196712560 chr1:196712543-196712561 chr1:196712545-196712566
41	CTCF	chr1:196712500-196712650	HPAF	blood vessel:	n/a	chr1:196712547-196712554 chr1:196712544-196712560 chr1:196712543-196712561 chr1:196712545-196712566
42	CTCF	chr1:196712471-196712652	HepG2	liver:	n/a	chr1:196712547-196712554 chr1:196712544-196712560 chr1:196712543-196712561 chr1:196712545-196712566
43	CTCF	chr1:196797122-196797315	Gliobla	brain:	n/a	chr1:196797163-196797184 chr1:196797161-196797179 chr1:196797165-196797172 chr1:196797162-196797178
44	CTCF	chr1:196847132-196847435	H1-hESC	embryonic stem cell:	n/a	n/a
45	CTCF	chr1:196797140-196797256	HepG2	liver:	n/a	chr1:196797163-196797184 chr1:196797161-196797179 chr1:196797165-196797172 chr1:196797162-196797178
46	CTCF	chr1:196712333-196712368	LNCaP	prostate:	n/a	n/a
47	CTCF	chr1:196866700-196866850	HRE	kidney:	n/a	n/a
48	CTCF	chr1:196712401-196712691	K562	blood:	n/a	chr1:196712547-196712554 chr1:196712544-196712560 chr1:196712543-196712561 chr1:196712545-196712566
49	CTCF	chr1:196712500-196712650	NB4	blood:	n/a	chr1:196712547-196712554 chr1:196712544-196712560 chr1:196712543-196712561 chr1:196712545-196712566
50	CTCF	chr1:196712480-196712630	GM12875	blood:	n/a	chr1:196712547-196712554 chr1:196712544-196712560 chr1:196712543-196712561 chr1:196712545-196712566

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr1:196844364-196844414	GM12891	blood:	n/a
2	chr1:196844364-196844414	AG04449	skin:	fetal
3	chr1:196847859-196847909	GM06990	blood:	n/a
4	chr1:196787850-196787900	LNCaP	prostate:	n/a
5	chr1:196787850-196787900	MCF10A-Er-Src	breast:	n/a
6	chr1:196847182-196847232	GM12878	blood:	n/a
7	chr1:196743672-196743722	GM12878	blood:	n/a
8	chr1:196866512-196866562	NT2-D1	testis:	n/a
9	chr1:196865686-196865736	HCPEpiC	choroid plexus:	n/a
10	chr1:196847859-196847909	AG09319	gingival:	n/a
11	chr1:196866322-196866372	GM12878	blood:	n/a
12	chr1:196746875-196746925	Hela-S3	cervix:	n/a
13	chr1:196844364-196844414	ECC-1	luminal epithelium:	n/a
14	chr1:196743672-196743722	NHBE	bronchial:	n/a
15	chr1:196795943-196795993	HEK293	kidney:	embryo
16	chr1:196746875-196746925	SK-N-SH	brain:	n/a
17	chr1:196866322-196866372	Hepatocyte	liver:	n/a
18	chr1:196866512-196866562	Jurkat	blood:	n/a
19	chr1:196855851-196855901	K562	blood:	n/a
20	chr1:196865686-196865736	HRCEpiC	kidney:	n/a
21	chr1:196787850-196787900	AoSMC	blood vessel:	n/a
22	chr1:196865686-196865736	Jurkat	blood:	n/a
23	chr1:196866512-196866562	U87	brain:	n/a
24	chr1:196795943-196795993	Caco-2	colon:	n/a
25	chr1:196787850-196787900	NT2-D1	testis:	n/a
26	chr1:196844364-196844414	T-47D	breast:	n/a
27	chr1:196844364-196844414	K562	blood:	n/a
28	chr1:196847859-196847909	H1-hESC	embryonic stem cell:	embryo
29	chr1:196847182-196847232	HIPEpiC	eye:	n/a
30	chr1:196795943-196795993	SKMC	muscle:	n/a
31	chr1:196855851-196855901	HL-60	blood:	n/a
32	chr1:196795943-196795993	HRCEpiC	kidney:	n/a
33	chr1:196847182-196847232	PrEC	prostate:	n/a
34	chr1:196866512-196866562	NHBE	bronchial:	n/a
35	chr1:196865686-196865736	AG04449	skin:	fetal
36	chr1:196743672-196743722	ovcar-3	ovarian:	n/a
37	chr1:196866322-196866372	HRPEpiC	eye:	n/a
38	chr1:196847182-196847232	AG04450	lung:	fetal
39	chr1:196795943-196795993	ovcar-3	ovarian:	n/a
40	chr1:196847182-196847232	AG10803	skin:	n/a
41	chr1:196746875-196746925	NB4	blood:	n/a
42	chr1:196787850-196787900	PANC-1	pancreas:	n/a
43	chr1:196865686-196865736	MCF-7	breast:	n/a
44	chr1:196787850-196787900	K562	blood:	n/a
45	chr1:196847182-196847232	Hela-S3	cervix:	n/a
46	chr1:196866512-196866562	GM19239	blood:	n/a
47	chr1:196787850-196787900	HEEpiC	esophagus:	n/a
48	chr1:196855851-196855901	HRE	kidney:	n/a
49	chr1:196865686-196865736	A549	lung:	n/a
50	chr1:196855851-196855901	SK-N-SH	brain:	n/a

No.	Distal block	Cell Line	Cell type
1	chr1:196712168..196712942-chr1:196796703..196797590,3	MCF-7	breast:
2	chr1:196734362..196735975-chr1:196744220..196746531,2	MCF-7	breast:
3	chr1:196692236..196693111-chr1:196859470..196860182,3	MCF-7	breast:
4	chr1:196711931..196712944-chr1:196796605..196797511,4	MCF-7	breast:
5	chr1:196738269..196739930-chr1:196742962..196745311,2	MCF-7	breast:
6	chr1:196711011..196712654-chr1:196796494..196798129,2	MCF-7	breast:
7	chr1:196796721..196797658-chr1:196859492..196860452,2	MCF-7	breast:
8	chr1:196711011..196712654-chr1:196796494..196798129,2	MCF-7	breast:
9	chr1:196712121..196712996-chr1:197035666..197036522,2	MCF-7	breast:
10	chr1:196863909..196866784-chr1:196987706..196990469,2	K562	blood:
11	chr1:196734362..196735975-chr1:196744220..196746531,2	MCF-7	breast:
12	chr1:196833036..196835508-chr1:196837217..196839600,2	K562	blood:
13	chr1:196711931..196712944-chr1:196796605..196797511,4	MCF-7	breast:
14	chr1:196833036..196835508-chr1:196837217..196839600,2	K562	blood:
15	chr1:196712193..196713017-chr1:197326079..197326750,3	MCF-7	breast:
16	chr1:196866686..196869291-chr1:196870395..196872004,2	K562	blood:
17	chr1:196706600..196708493-chr1:196711945..196714734,2	K562	blood:
18	chr1:196852522..196854884-chr1:197003323..197006250,2	K562	blood:
19	chr1:196712168..196712942-chr1:196796703..196797590,3	MCF-7	breast:
20	chr1:196821183..196821683-chr13:114578689..114579580,2	NB4	blood:
21	chr1:196796721..196797658-chr1:196859492..196860452,2	MCF-7	breast:
22	chr1:196286813..196287729-chr1:196859599..196860261,2	MCF-7	breast:

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-CFHR2-1	chr1:196794354-196794801	NONHSAT008603
2	lnc-CFHR2-1	chr1:196794607-196794801	NONHSAT008600
3	lnc-CFHR2-1	chr1:196788952-196789032	NONHSAT008601
4	lnc-CFHR2-1	chr1:196797200-196797225	NONHSAT008600
5	lnc-F13B-1	chr1:196834519-196834621	NONHSAT008604
6	lnc-CFHR2-1	chr1:196788893-196789032	NONHSAT008600
7	lnc-CFHR2-1	chr1:196788995-196789032	NONHSAT008602
8	lnc-CFHR1-1	chr1:196758890-196759357	NONHSAT008599
9	lnc-CFHR2-1	chr1:196797280-196797376	NONHSAT008600
10	lnc-CFHR2-1	chr1:196795959-196796135	NONHSAT008603
11	lnc-CFHR1-1	chr1:196762447-196762763	NONHSAT008599
12	lnc-CFHR2-1	chr1:196790015-196790332	NONHSAT008601
13	lnc-CFHR2-1	chr1:196795959-196796135	NONHSAT008600
14	lnc-CFHR2-1	chr1:196794607-196795156	NONHSAT008602
15	lnc-F13B-1	chr1:196833477-196833736	NONHSAT008604
16	lnc-CFHR2-1	chr1:196797200-196797297	NONHSAT008603

No.	miRNA target gene	miRNA name	Chromosome Location	mirBase accession
1	CFH	hsa-miR-146a-5p	chr1:196716478-196716499

Variant related genes	Relation type
CFHR4	TF binding region
CFHR2	TF binding region
CFHR1	TF binding region
CFHR3	TF binding region
CFHR4	CpG island
CFHR2	CpG island
CFHR1	CpG island
CFHR3	CpG island
ENSG00000116785	chromatin interactions
ENSG00000143278	chromatin interactions

Extended variants
information (count: 3267 )
Associated
traits (count: 92 )

Variant overlapped rSNPs/rCNVs (count:3267 , 50 per page) page: 1 2 3 4 5 6 7 ... 66

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs534399	chr1:196711067-196711068	Weak transcription Strong transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
2	rs201380066	chr1:196711073-196711074	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs11539862	chr1:196711076-196711077	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs147864267	chr1:196711093-196711094	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs34362004	chr1:196711098-196711099	Weak transcription Strong transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
6	rs1040597	chr1:196711099-196711100	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs199585511	chr1:196711110-196711111	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs373385518	chr1:196711127-196711128	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs34594237	chr1:196711150-196711151	Weak transcription Strong transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
10	rs377051240	chr1:196711161-196711162	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs148480839	chr1:196711166-196711167	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs370384708	chr1:196711167-196711168	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs111658900	chr1:196711182-196711183	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs111415585	chr1:196711183-196711184	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs374729595	chr1:196711185-196711186	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs142718541	chr1:196711189-196711190	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs533218029	chr1:196711213-196711214	Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs368026369	chr1:196711214-196711215	Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs573680704	chr1:196711243-196711244	Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs538497435	chr1:196711248-196711249	Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs556854784	chr1:196711257-196711258	Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs151243611	chr1:196711280-196711281	Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs545611835	chr1:196711333-196711334	Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs551306452	chr1:196711338-196711339	Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs560537602	chr1:196711347-196711348	Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs200292510	chr1:196711348-196711349	Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs202063301	chr1:196711351-196711352	Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs572179467	chr1:196711358-196711359	Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs537793604	chr1:196711366-196711367	Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs117434964	chr1:196711380-196711381	Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs560906905	chr1:196711393-196711394	Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs531637386	chr1:196711420-196711421	Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs140457772	chr1:196711438-196711439	Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs35496304	chr1:196711460-196711461	Strong transcription Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
35	rs376189313	chr1:196711463-196711464	Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs532969108	chr1:196711477-196711478	Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs201254178	chr1:196711480-196711481	Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs182185800	chr1:196711500-196711501	Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs187263890	chr1:196711501-196711502	Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs72734357	chr1:196711689-196711690	Weak transcription Strong transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
41	rs549107138	chr1:196711705-196711706	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs576313393	chr1:196711708-196711709	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs147050370	chr1:196711714-196711715	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs537886226	chr1:196711745-196711746	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs556557700	chr1:196711774-196711775	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs578221476	chr1:196711792-196711793	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs538985870	chr1:196711796-196711797	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs554295039	chr1:196711864-196711865	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs147696131	chr1:196711867-196711868	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs542704706	chr1:196711869-196711870	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:92)

Disease	PMID	Source
Breast cancer	17603634	CNVD
Esophageal squamous carcinoma	21637470	CNVD
HIV/AIDS	22032296	CNVD
Schizophrenia	19415332	CNVD
Autism	22495311	CNVD
Liposarcoma	21253554	CNVD
Burkitt''s lymphoma	18698080	CNVD
Melanoma	18172304	CNVD
Rett syndrome	21593744	CNVD
Cancer	20164919	CNVD
Medulloblastoma	21979893	CNVD
Acute lymphoblastic leukemia	17443227	CNVD
Wilms tumour	21544195	CNVD
Breast cancer	17133270	CNVD
Carcinoma ex pleomorphic adenoma	18828159	CNVD
Non-small cell lung cancer	21044232	CNVD
Cervical cancer	21063398	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	20632083	CNVD
Endometrial cancer	22040021	CNVD
Ewing''s sarcoma	21437220	CNVD
Gastrointestinal stromal cancer	20470368	CNVD
Glioblastoma multiforme	19960244	CNVD
Glioblastoma multiforme	21080181	CNVD
Hepatocellular carcinoma	22174799	CNVD
Medulloblastoma	21292688	CNVD
Phyllodes tumor	17334353	CNVD
Breast cancer	21264507	CNVD
Multiple myeloma	21628407	CNVD
Cancer	16751803	CNVD
Prostate cancer	16705090	CNVD
Neuroblastoma	19435921	CNVD
Breast cancer	17850661	CNVD
Breast cancer	16461572	CNVD
Intracranial tumor	16823260	CNVD
Medulloblastoma	18056178	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Primary mediastinal b-cell lymphoma	17728785	CNVD
Colorectal cancer	16272173	CNVD
Acute lymphoblastic leukemia	21098271	CNVD
Neuroblastoma	21899760	CNVD
Ovarian neoplasms	16753589	CNVD
Glioblastoma multiforme	17002787	CNVD
Breast cancer	21858162	CNVD
Non-small cell lung cancer	21385341	CNVD
Acute lymphoblastic leukemia	21980252	CNVD
Breast cancer	16608533	CNVD
Ewing''s sarcoma	22429812	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Hepatocellular carcinoma	18803288	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Breast cancer	17001317	CNVD
Acute myeloid leukemia	21251322	CNVD
Multiple myeloma	17550852	CNVD
Prostate cancer	18632612	CNVD
Acute myeloid leukemia	20729466	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Testicular germ cell tumor	18059402	CNVD
Ependymoma	18628472	CNVD
Leukemia	18628472	CNVD
Neuroblastoma	18923191	CNVD
Acute lymphoblastic leukemia	19100363	CNVD
Breast cancer	21509527	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Lung cancer	18438408	CNVD
Metanephric adenoma	20802469	CNVD
Breast cancer	21611746	CNVD
primary effusion lymphomas	17116491	CNVD
Breast cancer	17393978	CNVD
Hepatocellular carcinoma	16750200	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Non-small cell lung cancer	19010865	CNVD
Mental retardation	17847001	CNVD
Basal cell lymphoma	17170743	CNVD
Follicular lymphoma	17170743	CNVD
Trisomy 5 syndrome	21098271	CNVD
Glioblastoma multiforme	22286061	CNVD
Urothelial carcinoma	21177765	CNVD
Myelofibrosis	22110671	CNVD
Breast cancer	16272173	CNVD
Mental retardation	21062444	CNVD
Liver carcinoma	19366792	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Chordoma	18071362	CNVD
small cell lung cancer	20016488	CNVD
Neuroblastoma	20406844	CNVD
early-passage human iPS cells	21368824	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD
Pancreatic cancer	17952125	CNVD
Breast cancer	22522925	CNVD

Chromatin state (count:258 , 50 per page) page: 1 2 3 4 5 6

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:196691200-196718400	Weak transcription	Skeletal Muscle Male	skeletal muscle
2	chr1:196706000-196711400	Strong transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
3	chr1:196707400-196722400	Weak transcription	Psoas Muscle	Psoas
4	chr1:196707800-196712600	Weak transcription	NH-A	brain
5	chr1:196708000-196719800	Weak transcription	Skeletal Muscle Female	skeletal muscle
6	chr1:196708400-196711400	Strong transcription	Fetal Muscle Leg	muscle
7	chr1:196708400-196711600	Strong transcription	Ovary	ovary
8	chr1:196708400-196712000	Weak transcription	Small Intestine	intestine
9	chr1:196708400-196712800	Weak transcription	Fetal Stomach	stomach
10	chr1:196708400-196717200	Strong transcription	Liver	Liver
11	chr1:196708800-196712600	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
12	chr1:196708800-196718200	Weak transcription	Adipose Nuclei	Adipose
13	chr1:196709000-196712000	Weak transcription	Primary hematopoietic stem cells short term culture	blood
14	chr1:196709000-196712600	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
15	chr1:196709200-196712600	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
16	chr1:196709200-196712600	Weak transcription	Muscle Satellite Cultured Cells	--
17	chr1:196709400-196711200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
18	chr1:196709400-196716800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
19	chr1:196709400-196716800	Weak transcription	Fetal Muscle Trunk	muscle
20	chr1:196709400-196718000	Weak transcription	Duodenum Mucosa	Duodenum
21	chr1:196710200-196711200	Strong transcription	Dnd41	blood
22	chr1:196710200-196711800	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
23	chr1:196710200-196712000	Weak transcription	K562	blood
24	chr1:196710600-196718200	Weak transcription	HSMM	muscle
25	chr1:196711200-196711600	Strong transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
26	chr1:196711200-196714600	Weak transcription	Dnd41	blood
27	chr1:196711400-196717800	Weak transcription	Fetal Muscle Leg	muscle
28	chr1:196711400-196719800	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
29	chr1:196711600-196717200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
30	chr1:196711600-196718000	Weak transcription	Ovary	ovary
31	chr1:196711800-196713400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
32	chr1:196712600-196712800	Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
33	chr1:196712600-196712800	Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
34	chr1:196712600-196712800	Enhancers	Muscle Satellite Cultured Cells	--
35	chr1:196712800-196718400	Weak transcription	Muscle Satellite Cultured Cells	--
36	chr1:196714600-196717000	Strong transcription	Dnd41	blood
37	chr1:196717000-196719800	Weak transcription	Dnd41	blood
38	chr1:196717200-196718800	Weak transcription	Liver	Liver
39	chr1:196734800-196735000	Enhancers	Liver	Liver
40	chr1:196735000-196743200	Weak transcription	Liver	Liver
41	chr1:196743200-196743600	Flanking Active TSS	Liver	Liver
42	chr1:196743600-196748600	Active TSS	Liver	Liver
43	chr1:196748600-196749000	Weak transcription	Liver	Liver
44	chr1:196749000-196749200	ZNF genes & repeats	Pancreas	Pancrea
45	chr1:196749000-196749800	ZNF genes & repeats	Liver	Liver
46	chr1:196749800-196755800	Weak transcription	Liver	Liver
47	chr1:196755000-196756200	Active TSS	ES-I3 Cell Line	embryonic stem cell
48	chr1:196755200-196755800	Active TSS	HUES64 Cell Line	embryonic stem cell
49	chr1:196755200-196756400	Active TSS	HUES48 Cell Line	embryonic stem cell
50	chr1:196755200-196756400	Active TSS	HUES6 Cell Line	embryonic stem cell

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