Variant report

Variant nsv548771
Chromosome Location chr1:196726316-196901753
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:244 , 50 per page) page: 1 2 3 4 5
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:196734800-196735000 Enhancers Liver Liver
2 chr1:196735000-196743200 Weak transcription Liver Liver
3 chr1:196743200-196743600 Flanking Active TSS Liver Liver
4 chr1:196743600-196748600 Active TSS Liver Liver
5 chr1:196748600-196749000 Weak transcription Liver Liver
6 chr1:196749000-196749200 ZNF genes & repeats Pancreas Pancrea
7 chr1:196749000-196749800 ZNF genes & repeats Liver Liver
8 chr1:196749800-196755800 Weak transcription Liver Liver
9 chr1:196755000-196756200 Active TSS ES-I3 Cell Line embryonic stem cell
10 chr1:196755200-196755800 Active TSS HUES64 Cell Line embryonic stem cell
11 chr1:196755200-196756400 Active TSS HUES48 Cell Line embryonic stem cell
12 chr1:196755200-196756400 Active TSS HUES6 Cell Line embryonic stem cell
13 chr1:196755400-196755600 Enhancers H1 Cell Line embryonic stem cell
14 chr1:196755600-196755800 Flanking Active TSS H1 Cell Line embryonic stem cell
15 chr1:196755600-196756000 Active TSS iPS-20b Cell Line embryonic stem cell
16 chr1:196755600-196756000 Active TSS Placenta Placenta
17 chr1:196755600-196756200 Active TSS H9 Cell Line embryonic stem cell
18 chr1:196755600-196756200 Active TSS iPS-15b Cell Line embryonic stem cell
19 chr1:196755600-196756400 Active TSS ES-WA7 Cell Line embryonic stem cell
20 chr1:196755800-196756000 Flanking Bivalent TSS/Enh H1 Cell Line embryonic stem cell
21 chr1:196755800-196756000 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
22 chr1:196755800-196756400 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
23 chr1:196755800-196756400 Flanking Active TSS HUES64 Cell Line embryonic stem cell
24 chr1:196755800-196756400 ZNF genes & repeats Liver Liver
25 chr1:196755800-196756400 Active TSS A549 lung
26 chr1:196756000-196756200 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
27 chr1:196756000-196756400 Enhancers iPS-20b Cell Line embryonic stem cell
28 chr1:196756000-196756400 Active TSS K562 blood
29 chr1:196756200-196756400 Flanking Active TSS ES-I3 Cell Line embryonic stem cell
30 chr1:196756200-196756400 Flanking Active TSS iPS-15b Cell Line embryonic stem cell
31 chr1:196756400-196756600 Enhancers ES-I3 Cell Line embryonic stem cell
32 chr1:196756400-196756600 Weak transcription HUES6 Cell Line embryonic stem cell
33 chr1:196756400-196756800 Weak transcription HUES48 Cell Line embryonic stem cell
34 chr1:196756400-196757800 Weak transcription iPS-15b Cell Line embryonic stem cell
35 chr1:196756400-196758200 Enhancers HUES64 Cell Line embryonic stem cell
36 chr1:196756400-196764800 Weak transcription Liver Liver
37 chr1:196756600-196757000 Weak transcription ES-I3 Cell Line embryonic stem cell
38 chr1:196756600-196757000 Enhancers HUES6 Cell Line embryonic stem cell
39 chr1:196756800-196757000 Enhancers HUES48 Cell Line embryonic stem cell
40 chr1:196757000-196758200 Weak transcription HUES48 Cell Line embryonic stem cell
41 chr1:196757200-196757400 Enhancers ES-I3 Cell Line embryonic stem cell
42 chr1:196757800-196758200 Enhancers iPS-15b Cell Line embryonic stem cell
43 chr1:196758200-196758400 Enhancers HUES48 Cell Line embryonic stem cell
44 chr1:196770800-196771200 Enhancers Muscle Satellite Cultured Cells --
45 chr1:196778000-196778400 ZNF genes & repeats iPS DF 19.11 Cell Line embryonic stem cell
46 chr1:196778400-196778800 Active TSS Spleen Spleen
47 chr1:196778400-196779600 Enhancers Primary hematopoietic stem cells short term culture blood
48 chr1:196778800-196779200 Enhancers Spleen Spleen
49 chr1:196786400-196786600 Active TSS Liver Liver
50 chr1:196786600-196786800 Flanking Active TSS Liver Liver

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