Variant report

Variant nsv548801
Chromosome Location chr1:196761760-196904450
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:206 , 50 per page) page: 1 2 3 4 5
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:196756400-196764800 Weak transcription Liver Liver
2 chr1:196770800-196771200 Enhancers Muscle Satellite Cultured Cells --
3 chr1:196778000-196778400 ZNF genes & repeats iPS DF 19.11 Cell Line embryonic stem cell
4 chr1:196778400-196778800 Active TSS Spleen Spleen
5 chr1:196778400-196779600 Enhancers Primary hematopoietic stem cells short term culture blood
6 chr1:196778800-196779200 Enhancers Spleen Spleen
7 chr1:196786400-196786600 Active TSS Liver Liver
8 chr1:196786600-196786800 Flanking Active TSS Liver Liver
9 chr1:196786600-196787000 Enhancers HUES6 Cell Line embryonic stem cell
10 chr1:196786800-196787000 Active TSS Liver Liver
11 chr1:196787000-196788000 Enhancers Liver Liver
12 chr1:196788000-196789200 Weak transcription Liver Liver
13 chr1:196789200-196790400 Active TSS Liver Liver
14 chr1:196790400-196791200 Weak transcription Liver Liver
15 chr1:196791200-196793000 Active TSS Liver Liver
16 chr1:196793000-196793400 Flanking Active TSS Liver Liver
17 chr1:196793400-196793600 Enhancers Liver Liver
18 chr1:196793400-196793600 Enhancers Gastric stomach
19 chr1:196793600-196794200 Weak transcription Liver Liver
20 chr1:196794200-196795000 Enhancers Liver Liver
21 chr1:196795000-196796000 Weak transcription Liver Liver
22 chr1:196796000-196796600 Enhancers Liver Liver
23 chr1:196796600-196799400 Weak transcription Liver Liver
24 chr1:196797000-196797400 Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
25 chr1:196797200-196797800 Active TSS Ovary ovary
26 chr1:196797600-196799800 Active TSS Muscle Satellite Cultured Cells --
27 chr1:196799200-196799600 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
28 chr1:196818000-196819600 Enhancers Liver Liver
29 chr1:196846800-196847000 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
30 chr1:196846800-196847400 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
31 chr1:196846800-196847600 Active TSS Fetal Brain Female brain
32 chr1:196847000-196847200 Bivalent Enhancer Cortex derived primary cultured neurospheres brain
33 chr1:196847000-196847200 Bivalent Enhancer Colon Smooth Muscle Colon
34 chr1:196847000-196847200 Enhancers Fetal Brain Male brain
35 chr1:196847000-196847200 Active TSS Psoas Muscle Psoas
36 chr1:196847000-196847200 Active TSS A549 lung
37 chr1:196847000-196847400 Bivalent/Poised TSS HUES48 Cell Line embryonic stem cell
38 chr1:196847000-196847400 Bivalent/Poised TSS HUES6 Cell Line embryonic stem cell
39 chr1:196847000-196847400 Bivalent/Poised TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
40 chr1:196847000-196847400 Active TSS Muscle Satellite Cultured Cells --
41 chr1:196847000-196847400 Active TSS Liver Liver
42 chr1:196847000-196847400 Active TSS Brain Anterior Caudate brain
43 chr1:196847000-196847400 Bivalent Enhancer Brain Hippocampus Middle brain
44 chr1:196847000-196847400 Active TSS Osteobl bone
45 chr1:196847000-196847600 Bivalent/Poised TSS HUES64 Cell Line embryonic stem cell
46 chr1:196847000-196847600 Bivalent/Poised TSS iPS-18 Cell Line embryonic stem cell
47 chr1:196847000-196847600 Bivalent/Poised TSS iPS-20b Cell Line embryonic stem cell
48 chr1:196847000-196847600 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
49 chr1:196847000-196847600 Flanking Active TSS Ganglion Eminence derived primary cultured neurospheres brain
50 chr1:196847000-196847600 Active TSS Foreskin Fibroblast Primary Cells skin01 Skin

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