Variant report

Variant nsv549194
Chromosome Location chr1:216055853-216072598
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:54 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:216055400-216064200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
2 chr1:216059000-216059600 Enhancers Pancreatic Islets Pancreatic Islet
3 chr1:216059600-216060800 Weak transcription Pancreatic Islets Pancreatic Islet
4 chr1:216060800-216061600 Enhancers Pancreatic Islets Pancreatic Islet
5 chr1:216060800-216062000 Enhancers Liver Liver
6 chr1:216061000-216061400 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
7 chr1:216061000-216061400 Enhancers Brain Germinal Matrix brain
8 chr1:216061000-216061800 Enhancers Cortex derived primary cultured neurospheres brain
9 chr1:216061400-216061600 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
10 chr1:216061400-216064200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
11 chr1:216061600-216062800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
12 chr1:216061600-216065000 Weak transcription Pancreatic Islets Pancreatic Islet
13 chr1:216062800-216063800 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
14 chr1:216063200-216063400 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
15 chr1:216063200-216063800 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
16 chr1:216063400-216064400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
17 chr1:216063600-216064200 Active TSS GM12878-XiMat blood
18 chr1:216063800-216064200 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
19 chr1:216063800-216064800 Enhancers Adipose Nuclei Adipose
20 chr1:216063800-216065600 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
21 chr1:216064200-216064400 Weak transcription GM12878-XiMat blood
22 chr1:216064200-216064800 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
23 chr1:216064200-216064800 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
24 chr1:216064200-216065600 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
25 chr1:216064400-216064800 Enhancers HUES6 Cell Line embryonic stem cell
26 chr1:216064400-216064800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
27 chr1:216064400-216064800 Bivalent Enhancer Primary hematopoietic stem cells G-CSF-mobilized Male --
28 chr1:216064400-216065000 Enhancers Muscle Satellite Cultured Cells --
29 chr1:216064400-216065200 Enhancers GM12878-XiMat blood
30 chr1:216064400-216065400 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
31 chr1:216064600-216064800 Enhancers Fetal Kidney kidney
32 chr1:216064600-216065000 Enhancers Osteobl bone
33 chr1:216064600-216065200 Enhancers NHDF-Ad bronchial
34 chr1:216064600-216065400 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
35 chr1:216064600-216065600 Enhancers NHLF lung
36 chr1:216064800-216065000 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
37 chr1:216064800-216067600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
38 chr1:216065000-216065200 Flanking Active TSS IMR90 fetal lung fibroblasts Cell Line lung
39 chr1:216065000-216065200 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
40 chr1:216065000-216065200 Enhancers Breast Myoepithelial Primary Cells Breast
41 chr1:216065000-216065400 Flanking Active TSS Muscle Satellite Cultured Cells --
42 chr1:216065000-216065400 Active TSS Pancreatic Islets Pancreatic Islet
43 chr1:216065200-216065400 Active TSS IMR90 fetal lung fibroblasts Cell Line lung
44 chr1:216065200-216065400 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
45 chr1:216065200-216065400 Bivalent Enhancer Breast Myoepithelial Primary Cells Breast
46 chr1:216065400-216065800 Enhancers Muscle Satellite Cultured Cells --
47 chr1:216065400-216068800 Weak transcription Pancreatic Islets Pancreatic Islet
48 chr1:216065600-216066200 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
49 chr1:216067600-216069400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
50 chr1:216067800-216068600 Enhancers Primary hematopoietic stem cells blood

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