Variant report

Variant nsv549273
Chromosome Location chr1:227995966-228051234
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:66 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:227990400-227997800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
2 chr1:227994400-227996000 Weak transcription HMEC breast
3 chr1:227994400-227996200 Weak transcription Muscle Satellite Cultured Cells --
4 chr1:227995800-227996600 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
5 chr1:227996000-227996600 Enhancers HMEC breast
6 chr1:227996200-227996800 Enhancers Muscle Satellite Cultured Cells --
7 chr1:227996400-227996600 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
8 chr1:227996400-227996600 Enhancers HSMM muscle
9 chr1:227996400-227996800 Enhancers Primary T helper naive cells from peripheral blood blood
10 chr1:227996400-227996800 Enhancers Primary T helper memory cells from peripheral blood 1 blood
11 chr1:227996400-227996800 Enhancers Primary T helper 17 cells PMA-I stimulated --
12 chr1:227996400-227996800 Enhancers Primary T helper cells fromperipheralblood blood
13 chr1:227996400-227997000 Enhancers Primary T helper memory cells from peripheral blood 2 blood
14 chr1:227996400-227997000 Enhancers Primary T helper cells PMA-I stimulated --
15 chr1:228001400-228002000 ZNF genes & repeats Brain Dorsolateral Prefrontal Cortex brain
16 chr1:228003200-228005000 ZNF genes & repeats iPS DF 19.11 Cell Line embryonic stem cell
17 chr1:228003800-228005400 Enhancers Primary Natural Killer cells fromperipheralblood blood
18 chr1:228004200-228005400 Enhancers Primary T cells fromperipheralblood blood
19 chr1:228004600-228005000 Enhancers Primary hematopoietic stem cells short term culture blood
20 chr1:228004600-228005200 Enhancers Primary T killer memory cells from peripheral blood blood
21 chr1:228004600-228005400 Enhancers Primary T killer naive cells fromperipheralblood blood
22 chr1:228005000-228005200 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
23 chr1:228014800-228015000 Enhancers Primary T helper naive cells from peripheral blood blood
24 chr1:228014800-228016800 Enhancers Primary T killer naive cells fromperipheralblood blood
25 chr1:228015000-228015800 Weak transcription Primary T helper naive cells from peripheral blood blood
26 chr1:228015000-228016800 Enhancers Primary T killer memory cells from peripheral blood blood
27 chr1:228015800-228017000 Enhancers Primary T helper naive cells from peripheral blood blood
28 chr1:228016000-228017000 Bivalent Enhancer Primary T cells fromperipheralblood blood
29 chr1:228016200-228016600 Bivalent Enhancer Foreskin Melanocyte Primary Cells skin01 Skin
30 chr1:228016200-228017000 Bivalent Enhancer Primary Natural Killer cells fromperipheralblood blood
31 chr1:228016600-228016800 Bivalent/Poised TSS Foreskin Melanocyte Primary Cells skin01 Skin
32 chr1:228016600-228017000 Enhancers Dnd41 blood
33 chr1:228016600-228017000 Enhancers HMEC breast
34 chr1:228026000-228026400 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
35 chr1:228028800-228029600 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
36 chr1:228029000-228029200 Enhancers K562 blood
37 chr1:228029200-228029400 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
38 chr1:228029200-228033200 Weak transcription K562 blood
39 chr1:228029600-228032000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
40 chr1:228031800-228032200 Enhancers Primary T cells fromperipheralblood blood
41 chr1:228031800-228032400 Enhancers Primary T helper cells PMA-I stimulated --
42 chr1:228031800-228032400 Enhancers Primary Natural Killer cells fromperipheralblood blood
43 chr1:228032000-228032800 ZNF genes & repeats iPS DF 19.11 Cell Line embryonic stem cell
44 chr1:228032200-228032800 Bivalent Enhancer Primary T cells fromperipheralblood blood
45 chr1:228032400-228032800 Enhancers Primary T helper naive cells fromperipheralblood blood
46 chr1:228032800-228033200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
47 chr1:228033000-228033600 ZNF genes & repeats Foreskin Melanocyte Primary Cells skin01 Skin
48 chr1:228033200-228034000 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
49 chr1:228033200-228035800 Enhancers K562 blood
50 chr1:228034000-228034400 Enhancers HSMM muscle

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