Variant report

Variant nsv549439
Chromosome Location chr1:239785165-239800028
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:60 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:239784000-239786600 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
2 chr1:239784400-239786400 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
3 chr1:239786400-239789000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
4 chr1:239786600-239787400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
5 chr1:239792600-239793200 Active TSS H1 Cell Line embryonic stem cell
6 chr1:239792600-239793400 Active TSS H9 Cell Line embryonic stem cell
7 chr1:239792600-239793400 Active TSS HUES48 Cell Line embryonic stem cell
8 chr1:239792600-239793800 Active TSS HUES64 Cell Line embryonic stem cell
9 chr1:239792600-239794000 Active TSS ES-I3 Cell Line embryonic stem cell
10 chr1:239792600-239794200 Active TSS HUES6 Cell Line embryonic stem cell
11 chr1:239792800-239793200 Active TSS ES-UCSF4 Cell Line embryonic stem cell
12 chr1:239792800-239793400 Active TSS ES-WA7 Cell Line embryonic stem cell
13 chr1:239792800-239793600 Active TSS iPS-18 Cell Line embryonic stem cell
14 chr1:239792800-239794000 Active TSS iPS-15b Cell Line embryonic stem cell
15 chr1:239792800-239794000 Active TSS iPS-20b Cell Line embryonic stem cell
16 chr1:239793200-239793800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
17 chr1:239793200-239796600 Weak transcription H1 Cell Line embryonic stem cell
18 chr1:239793200-239797200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
19 chr1:239793400-239796600 Weak transcription H9 Cell Line embryonic stem cell
20 chr1:239793600-239797000 Weak transcription iPS-18 Cell Line embryonic stem cell
21 chr1:239793800-239794200 Enhancers Primary T cells from cord blood blood
22 chr1:239793800-239794400 Enhancers HUES64 Cell Line embryonic stem cell
23 chr1:239794000-239794200 Flanking Active TSS ES-I3 Cell Line embryonic stem cell
24 chr1:239794000-239794400 Enhancers Pancreas Pancrea
25 chr1:239794000-239795400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
26 chr1:239794200-239794600 Weak transcription Primary T cells from cord blood blood
27 chr1:239794200-239794800 Enhancers ES-I3 Cell Line embryonic stem cell
28 chr1:239794200-239796600 Weak transcription HUES6 Cell Line embryonic stem cell
29 chr1:239794400-239796600 Weak transcription HUES64 Cell Line embryonic stem cell
30 chr1:239794400-239808200 Weak transcription Pancreas Pancrea
31 chr1:239794600-239795200 Enhancers Primary T cells from cord blood blood
32 chr1:239794600-239795200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
33 chr1:239794600-239798400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
34 chr1:239794800-239797200 Weak transcription ES-I3 Cell Line embryonic stem cell
35 chr1:239795200-239796800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
36 chr1:239795400-239799600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
37 chr1:239796600-239797000 Enhancers Gastric stomach
38 chr1:239796600-239797200 Enhancers H9 Cell Line embryonic stem cell
39 chr1:239796600-239797200 Enhancers HUES64 Cell Line embryonic stem cell
40 chr1:239796600-239797200 Enhancers Small Intestine intestine
41 chr1:239796600-239797400 Enhancers H1 Cell Line embryonic stem cell
42 chr1:239796600-239797600 Enhancers HUES6 Cell Line embryonic stem cell
43 chr1:239796800-239797000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
44 chr1:239797000-239797400 Weak transcription Gastric stomach
45 chr1:239797000-239797800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
46 chr1:239797000-239798600 Enhancers iPS-18 Cell Line embryonic stem cell
47 chr1:239797200-239797400 Enhancers ES-I3 Cell Line embryonic stem cell
48 chr1:239797200-239797800 Enhancers ES-UCSF4 Cell Line embryonic stem cell
49 chr1:239797200-239798400 Weak transcription HUES64 Cell Line embryonic stem cell
50 chr1:239797400-239797600 Weak transcription ES-I3 Cell Line embryonic stem cell

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