Variant report

Variant nsv549466
Chromosome Location chr1:242713574-243141099
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:640 , 50 per page) page: 1 2 3 4 5 6 7 ... 13
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:242711000-242718000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
2 chr1:242717400-242718200 Enhancers iPS-15b Cell Line embryonic stem cell
3 chr1:242717800-242718600 Enhancers HMEC breast
4 chr1:242718000-242718400 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
5 chr1:242718400-242719600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
6 chr1:242718600-242719600 Weak transcription HMEC breast
7 chr1:242719600-242720400 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
8 chr1:242719600-242720400 Enhancers HMEC breast
9 chr1:242720400-242733400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
10 chr1:242723000-242723600 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
11 chr1:242723600-242723800 Flanking Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
12 chr1:242723800-242724000 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
13 chr1:242733000-242733800 Enhancers HMEC breast
14 chr1:242733200-242733600 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
15 chr1:242733400-242734000 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
16 chr1:242734000-242747800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
17 chr1:242737400-242738200 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
18 chr1:242742600-242742800 Enhancers A549 lung
19 chr1:242742800-242743200 Flanking Active TSS A549 lung
20 chr1:242743200-242743600 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
21 chr1:242743200-242744200 Enhancers A549 lung
22 chr1:242744200-242746000 Weak transcription A549 lung
23 chr1:242745800-242747200 Enhancers HepG2 liver
24 chr1:242746000-242746200 ZNF genes & repeats H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
25 chr1:242746000-242746400 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
26 chr1:242746000-242747000 Enhancers A549 lung
27 chr1:242746200-242746400 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
28 chr1:242746400-242747800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
29 chr1:242746600-242748800 Weak transcription H1 Cell Line embryonic stem cell
30 chr1:242747800-242748000 Bivalent Enhancer H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
31 chr1:242747800-242748000 ZNF genes & repeats HUES6 Cell Line embryonic stem cell
32 chr1:242747800-242748000 ZNF genes & repeats iPS DF 6.9 Cell Line embryonic stem cell
33 chr1:242747800-242748000 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
34 chr1:242748000-242748600 Weak transcription HUES6 Cell Line embryonic stem cell
35 chr1:242748000-242749600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
36 chr1:242748400-242750000 Enhancers iPS-15b Cell Line embryonic stem cell
37 chr1:242748400-242750200 Enhancers iPS-18 Cell Line embryonic stem cell
38 chr1:242748600-242749000 Bivalent Enhancer H9 Derived Neuron Cultured Cells ES cell derived
39 chr1:242748600-242750000 Enhancers HUES6 Cell Line embryonic stem cell
40 chr1:242748800-242749000 Bivalent Enhancer H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
41 chr1:242748800-242749000 Flanking Active TSS iPS-20b Cell Line embryonic stem cell
42 chr1:242748800-242749600 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
43 chr1:242748800-242749800 Enhancers Brain Germinal Matrix brain
44 chr1:242748800-242750200 Enhancers H9 Cell Line embryonic stem cell
45 chr1:242748800-242750200 Enhancers HUES48 Cell Line embryonic stem cell
46 chr1:242748800-242750200 Enhancers HUES64 Cell Line embryonic stem cell
47 chr1:242748800-242750600 Enhancers H1 Cell Line embryonic stem cell
48 chr1:242749000-242749200 Active TSS iPS-20b Cell Line embryonic stem cell
49 chr1:242749000-242750600 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
50 chr1:242749000-242750800 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived

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