Variant report

Variant nsv549522
Chromosome Location chr1:245979357-246005798
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:263 , 50 per page) page: 1 2 3 4 5 6
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:245949200-245999600 Weak transcription Gastric stomach
2 chr1:245961800-245980000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
3 chr1:245968400-245985800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
4 chr1:245971200-245985800 Weak transcription Osteobl bone
5 chr1:245973200-245986400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
6 chr1:245974400-246020800 Weak transcription Fetal Intestine Small intestine
7 chr1:245975000-245979400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
8 chr1:245976200-245979400 Weak transcription Placenta Placenta
9 chr1:245979200-245987000 Weak transcription K562 blood
10 chr1:245979400-245979800 Enhancers Placenta Placenta
11 chr1:245979600-245979800 Enhancers ES-I3 Cell Line embryonic stem cell
12 chr1:245979600-245979800 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
13 chr1:245979800-245980000 Enhancers H1 Cell Line embryonic stem cell
14 chr1:245979800-245980200 Active TSS HUES6 Cell Line embryonic stem cell
15 chr1:245979800-245980200 Active TSS Placenta Placenta
16 chr1:245979800-245980400 Active TSS H9 Cell Line embryonic stem cell
17 chr1:245979800-246000600 Weak transcription ES-I3 Cell Line embryonic stem cell
18 chr1:245980000-245980600 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
19 chr1:245980400-245980600 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
20 chr1:245980600-245985800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
21 chr1:245984200-246005200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
22 chr1:245985400-246005600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
23 chr1:245985800-245986000 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
24 chr1:245985800-245986000 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
25 chr1:245985800-245986200 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
26 chr1:245985800-245986200 Enhancers Muscle Satellite Cultured Cells --
27 chr1:245985800-245986200 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
28 chr1:245985800-245986200 Enhancers NH-A brain
29 chr1:245985800-245986200 Enhancers NHDF-Ad bronchial
30 chr1:245985800-245986200 Enhancers Osteobl bone
31 chr1:245985800-245986800 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
32 chr1:245985800-245987000 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
33 chr1:245985800-245987000 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
34 chr1:245985800-245987000 Enhancers HMEC breast
35 chr1:245985800-245987000 Enhancers HSMM muscle
36 chr1:245985800-245987200 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
37 chr1:245985800-245987400 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
38 chr1:245985800-245987400 Enhancers Placenta Placenta
39 chr1:245985800-245987400 Enhancers NHLF lung
40 chr1:245986000-245986400 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
41 chr1:245986000-245986400 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
42 chr1:245986000-245986800 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
43 chr1:245986000-245986800 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
44 chr1:245986000-245986800 Enhancers HSMMtube muscle
45 chr1:245986000-245986800 Enhancers NHEK skin
46 chr1:245986000-245987000 Enhancers A549 lung
47 chr1:245986000-245987200 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
48 chr1:245986000-245987200 Enhancers Hela-S3 cervix
49 chr1:245986000-245987400 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
50 chr1:245986000-245987400 Enhancers Placenta Amnion Placenta Amnion

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