Variant report

Variant	nsv549535
Chromosome Location	chr1:246681116-246708467
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:299)
CpG islands
(count:122)
Chromatin interactive
region (count:21)
LncRNA
region (count:3)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:299 , 50 per page) page: 1 2 3 4 5 6

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	CBX3	chr1:246693715-246694190	HCT-116	colon:	n/a	n/a
2	CBX3	chr1:246693720-246694251	HCT-116	colon:	n/a	n/a
3	CBX3	chr1:246690693-246691006	K562	blood:	n/a	n/a
4	CBX3	chr1:246693753-246694263	K562	blood:	n/a	n/a
5	CBX3	chr1:246693753-246694149	K562	blood:	n/a	n/a
6	CBX3	chr1:246690039-246690639	K562	blood:	n/a	n/a
7	CEBPB	chr1:246700854-246700946	IMR90	lung:	n/a	chr1:246700914-246700925
8	CEBPB	chr1:246694260-246694502	K562	blood:	n/a	chr1:246694437-246694448
9	CEBPB	chr1:246700849-246701076	HepG2	liver:	n/a	chr1:246700914-246700925
10	CEBPB	chr1:246694300-246694559	A549	lung:	n/a	chr1:246694437-246694448
11	CEBPB	chr1:246694367-246694482	Hela-S3	cervix:	n/a	chr1:246694437-246694448
12	CEBPB	chr1:246700839-246700981	K562	blood:	n/a	chr1:246700914-246700925
13	CEBPB	chr1:246700806-246700996	H1-hESC	embryonic stem cell:	n/a	chr1:246700914-246700925
14	CEBPB	chr1:246694313-246694560	IMR90	lung:	n/a	chr1:246694437-246694448
15	CEBPB	chr1:246694274-246694593	HepG2	liver:	n/a	chr1:246694437-246694448
16	CEBPB	chr1:246700803-246701018	A549	lung:	n/a	chr1:246700914-246700925
17	CTCF	chr1:246695940-246696090	AG04450	lung:	n/a	n/a
18	CTCF	chr1:246695960-246696110	HPF	lung:	n/a	n/a
19	CTCF	chr1:246692775-246692907	K562	blood:	n/a	n/a
20	CTCF	chr1:246695920-246696070	BE2_C	brain:	n/a	n/a
21	CTCF	chr1:246695900-246696050	AG09319	gingival:	n/a	n/a
22	CTCF	chr1:246695900-246696050	GM12875	blood:	n/a	n/a
23	CTCF	chr1:246695820-246695970	HA-sp	spinal cord:	n/a	n/a
24	CTCF	chr1:246692781-246692895	GM19240	blood:	n/a	n/a
25	CTCF	chr1:246695920-246696113	MCF-7	breast:	n/a	n/a
26	CTCF	chr1:246693491-246693590	Kidney_OC	kidney:	n/a	n/a
27	CTCF	chr1:246695943-246696092	Hela-S3	cervix:	n/a	n/a
28	CTCF	chr1:246695980-246696130	NHEK	skin:	n/a	n/a
29	CTCF	chr1:246692720-246692870	A549	lung:	n/a	n/a
30	CTCF	chr1:246695940-246696090	HepG2	liver:	n/a	n/a
31	CTCF	chr1:246695960-246696110	HVMF	connective:	n/a	n/a
32	CTCF	chr1:246695940-246696090	GM12873	blood:	n/a	n/a
33	CTCF	chr1:246695853-246696147	IMR90	lung:	n/a	n/a
34	CTCF	chr1:246692800-246692950	MCF-7	breast:	n/a	n/a
35	CTCF	chr1:246692740-246692890	HPAF	blood vessel:	n/a	n/a
36	CTCF	chr1:246695920-246696070	WERI-Rb-1	eye:	n/a	n/a
37	CTCF	chr1:246695940-246696090	HPF	lung:	n/a	n/a
38	CTCF	chr1:246695881-246696153	K562	blood:	n/a	n/a
39	CTCF	chr1:246692734-246692960	HepG2	liver:	n/a	n/a
40	CTCF	chr1:246695940-246696090	BJ	skin:	n/a	n/a
41	CTCF	chr1:246695930-246696109	K562	blood:	n/a	n/a
42	CTCF	chr1:246706040-246706190	HCPEpiC	choroid plexus:	n/a	chr1:246706125-246706143 chr1:246706127-246706148
43	CTCF	chr1:246696000-246696150	BJ	skin:	n/a	n/a
44	CTCF	chr1:246695860-246696010	GM12872	blood:	n/a	n/a
45	CTCF	chr1:246695963-246696074	GM12878	blood:	n/a	n/a
46	CTCF	chr1:246692817-246692857	GM19238	blood:	n/a	n/a
47	CTCF	chr1:246695920-246696070	HRPEpiC	eye:	n/a	n/a
48	CTCF	chr1:246695980-246696130	BE2_C	brain:	n/a	n/a
49	CTCF	chr1:246690380-246690530	GM12864	blood:	n/a	n/a
50	CTCF	chr1:246695920-246696070	GM12865	blood:	n/a	n/a

(count:122 , 50 per page) page: 1 2 3

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr1:246684113-246684163	HCPEpiC	choroid plexus:	n/a
2	chr1:246684329-246684379	AG09309	skin:	n/a
3	chr1:246684113-246684163	NH-A	brain:	n/a
4	chr1:246684113-246684163	BJ	skin:	n/a
5	chr1:246684329-246684379	ECC-1	luminal epithelium:	n/a
6	chr1:246684113-246684163	HAEpiC	amniotic membrane:	n/a
7	chr1:246684113-246684163	HepG2	liver:	n/a
8	chr1:246684329-246684379	GM12878	blood:	n/a
9	chr1:246684329-246684379	AG09319	gingival:	n/a
10	chr1:246684329-246684379	PFSK-1	brain:	n/a
11	chr1:246684329-246684379	BJ	skin:	n/a
12	chr1:246684113-246684163	MCF10A-Er-Src	breast:	n/a
13	chr1:246684329-246684379	PrEC	prostate:	n/a
14	chr1:246684329-246684379	GM12892	blood:	n/a
15	chr1:246684329-246684379	LNCaP	prostate:	n/a
16	chr1:246684113-246684163	PrEC	prostate:	n/a
17	chr1:246684329-246684379	HNPCEpiC	eye:	n/a
18	chr1:246684329-246684379	GM06990	blood:	n/a
19	chr1:246684113-246684163	SAEC	small airway:	n/a
20	chr1:246684113-246684163	GM12892	blood:	n/a
21	chr1:246684329-246684379	HEEpiC	esophagus:	n/a
22	chr1:246684113-246684163	AG04449	skin:	fetal
23	chr1:246684329-246684379	BE2_C	brain:	n/a
24	chr1:246684329-246684379	Jurkat	blood:	n/a
25	chr1:246684329-246684379	K562	blood:	n/a
26	chr1:246684113-246684163	AG04450	lung:	fetal
27	chr1:246684329-246684379	AG04450	lung:	fetal
28	chr1:246684113-246684163	MCF-7	breast:	n/a
29	chr1:246684329-246684379	NHBE	bronchial:	n/a
30	chr1:246684113-246684163	HL-60	blood:	n/a
31	chr1:246684113-246684163	ProgFib	skin:	n/a
32	chr1:246684329-246684379	SK-N-SH	brain:	n/a
33	chr1:246684113-246684163	LNCaP	prostate:	n/a
34	chr1:246684113-246684163	RPTEC	kidney:	n/a
35	chr1:246684329-246684379	HL-60	blood:	n/a
36	chr1:246684329-246684379	ProgFib	skin:	n/a
37	chr1:246684329-246684379	U87	brain:	n/a
38	chr1:246684113-246684163	PFSK-1	brain:	n/a
39	chr1:246684329-246684379	Hepatocyte	liver:	n/a
40	chr1:246684113-246684163	Jurkat	blood:	n/a
41	chr1:246684113-246684163	HRCEpiC	kidney:	n/a
42	chr1:246684113-246684163	SK-N-MC	brain:	n/a
43	chr1:246684113-246684163	HCF	heart:	n/a
44	chr1:246684329-246684379	HMEC	breast:	n/a
45	chr1:246684113-246684163	H1-hESC	embryonic stem cell:	embryo
46	chr1:246684113-246684163	HEK293	kidney:	embryo
47	chr1:246684329-246684379	SKMC	muscle:	n/a
48	chr1:246684113-246684163	HCM	heart:	n/a
49	chr1:246684329-246684379	IMR90	lung:	fetal
50	chr1:246684113-246684163	U87	brain:	n/a

(count:21 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr1:246703270..246704853-chr1:247491463..247493395,2	K562	blood:
2	chr1:246693616..246696084-chr1:246696950..246700656,3	K562	blood:
3	chr1:246660382..246660965-chr1:246695565..246696089,2	MCF-7	breast:
4	chr1:246692831..246695438-chr1:246704915..246707883,3	K562	blood:
5	chr1:246694155..246697194-chr1:246698575..246701434,3	MCF-7	breast:
6	chr1:246693616..246696084-chr1:246696950..246700656,3	K562	blood:
7	chr1:246704378..246705938-chr1:246830141..246833108,2	K562	blood:
8	chr1:246692831..246695438-chr1:246704915..246707883,3	K562	blood:
9	chr1:246694155..246697194-chr1:246698575..246701434,3	MCF-7	breast:
10	chr1:246660669..246662784-chr1:246700415..246702206,2	MCF-7	breast:
11	chr1:246699626..246702195-chr1:246706012..246708369,2	MCF-7	breast:
12	chr1:246660152..246661220-chr1:246692463..246693268,3	MCF-7	breast:
13	chr1:246685591..246688881-chr1:246727054..246730014,3	K562	blood:
14	chr1:246697803..246699754-chr1:246703795..246706062,2	K562	blood:
15	chr1:246697803..246699754-chr1:246703795..246706062,2	K562	blood:
16	chr1:246679194..246683104-chr1:246689621..246693878,4	K562	blood:
17	chr1:246680075..246681714-chr1:246684033..246686969,2	K562	blood:
18	chr1:246671783..246672632-chr1:246690944..246691587,2	MCF-7	breast:
19	chr1:246698102..246699613-chr1:246703690..246706174,2	K562	blood:
20	chr1:246698102..246699613-chr1:246703690..246706174,2	K562	blood:
21	chr1:246699626..246702195-chr1:246706012..246708369,2	MCF-7	breast:

(count:3 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-TFB2M-3	chr1:246691864-246692143	NONHSAT010709
2	lnc-CNST-2	chr1:246690332-246690503	NONHSAT010708
3	lnc-CNST-2	chr1:246691213-246691457	NONHSAT010708

No data

Variant related genes	Relation type
ENSG00000227728	TF binding region
ENSG00000229112	TF binding region
ENSG00000242042	TF binding region
ENSG00000230813	TF binding region
ENSG00000227728	CpG island
ENSG00000229112	CpG island
ENSG00000242042	CpG island
ENSG00000230813	CpG island
ENSG00000227728	chromatin interactions
ENSG00000162714	chromatin interactions
ENSG00000230813	chromatin interactions
ENSG00000162851	chromatin interactions
ENSG00000162852	chromatin interactions
ENSG00000229112	chromatin interactions

Extended variants
information (count: 1257 )
Associated
traits (count: 88 )

Variant overlapped rSNPs/rCNVs (count:1257 , 50 per page) page: 1 2 3 4 5 6 7 ... 26

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs10924763	chr1:246681116-246681117	ZNF genes & repeats Weak transcription	Chromatin interactive region	3 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
2	rs369597141	chr1:246681119-246681120	ZNF genes & repeats Weak transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
3	rs143457430	chr1:246681128-246681129	ZNF genes & repeats Weak transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
4	rs535932498	chr1:246681139-246681140	ZNF genes & repeats Weak transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
5	rs41305957	chr1:246681140-246681141	ZNF genes & repeats Weak transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
6	rs116776022	chr1:246681164-246681165	ZNF genes & repeats Weak transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
7	rs529102992	chr1:246681165-246681166	ZNF genes & repeats Weak transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
8	rs544639106	chr1:246681186-246681187	ZNF genes & repeats Weak transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
9	rs61512751	chr1:246681239-246681240	ZNF genes & repeats Weak transcription	Chromatin interactive region	3 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
10	rs550864042	chr1:246681244-246681245	ZNF genes & repeats Weak transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
11	rs578201830	chr1:246681269-246681270	ZNF genes & repeats Weak transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
12	rs555106013	chr1:246681306-246681307	ZNF genes & repeats Weak transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
13	rs368258918	chr1:246681341-246681342	ZNF genes & repeats Weak transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
14	rs12075899	chr1:246681349-246681350	ZNF genes & repeats Weak transcription	Chromatin interactive region	3 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
15	rs529560187	chr1:246681377-246681378	ZNF genes & repeats Weak transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
16	rs543124816	chr1:246681383-246681384	ZNF genes & repeats Weak transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
17	rs540648958	chr1:246681388-246681389	ZNF genes & repeats Weak transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
18	rs372945526	chr1:246681423-246681424	ZNF genes & repeats Weak transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
19	rs12096478	chr1:246681451-246681452	ZNF genes & repeats Weak transcription	Chromatin interactive region	3 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
20	rs373898957	chr1:246681456-246681457	ZNF genes & repeats Weak transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
21	rs61839849	chr1:246681493-246681494	ZNF genes & repeats Weak transcription	Chromatin interactive region	3 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
22	rs7529776	chr1:246681494-246681495	ZNF genes & repeats Weak transcription	Chromatin interactive region	3 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
23	rs58090432	chr1:246681604-246681605	ZNF genes & repeats Bivalent/Poised TSS Weak transcription	Chromatin interactive region	3 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
24	rs111894375	chr1:246681647-246681648	ZNF genes & repeats Bivalent/Poised TSS Weak transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
25	rs372846801	chr1:246681667-246681668	ZNF genes & repeats Bivalent/Poised TSS Weak transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
26	rs78167247	chr1:246681707-246681708	ZNF genes & repeats Bivalent/Poised TSS Weak transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
27	rs548327498	chr1:246681719-246681720	ZNF genes & repeats Bivalent/Poised TSS Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
28	rs536069117	chr1:246681728-246681729	ZNF genes & repeats Bivalent/Poised TSS Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
29	rs185095950	chr1:246681818-246681819	ZNF genes & repeats Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
30	rs559837003	chr1:246681829-246681830	ZNF genes & repeats Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
31	rs3129582	chr1:246681865-246681866	ZNF genes & repeats Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
32	rs538216338	chr1:246681877-246681878	ZNF genes & repeats Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
33	rs150600263	chr1:246681912-246681913	ZNF genes & repeats Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
34	rs527351245	chr1:246681917-246681918	ZNF genes & repeats Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
35	rs569146176	chr1:246681918-246681919	ZNF genes & repeats Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
36	rs10924764	chr1:246681921-246681922	ZNF genes & repeats Weak transcription	Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
37	rs574272278	chr1:246681935-246681936	ZNF genes & repeats Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
38	rs570426187	chr1:246681936-246681937	ZNF genes & repeats Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
39	rs139972239	chr1:246681946-246681947	ZNF genes & repeats Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
40	rs559858034	chr1:246681947-246681948	ZNF genes & repeats Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
41	rs573378741	chr1:246681962-246681963	ZNF genes & repeats Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
42	rs141779812	chr1:246681997-246681998	ZNF genes & repeats Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
43	rs374134155	chr1:246681999-246682000	ZNF genes & repeats Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
44	rs190879418	chr1:246682000-246682001	ZNF genes & repeats Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
45	rs61839851	chr1:246682027-246682028	ZNF genes & repeats Weak transcription	Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
46	rs550578056	chr1:246682028-246682029	ZNF genes & repeats Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
47	rs550058464	chr1:246682033-246682034	ZNF genes & repeats Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
48	rs146232206	chr1:246682063-246682064	ZNF genes & repeats Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
49	rs529804409	chr1:246682078-246682079	ZNF genes & repeats Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
50	rs114081353	chr1:246682139-246682140	ZNF genes & repeats Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:88)

Disease	PMID	Source
Esophageal squamous carcinoma	21637470	CNVD
HIV/AIDS	22032296	CNVD
Schizophrenia	19415332	CNVD
Melanoma	18172304	CNVD
Rett syndrome	21593744	CNVD
Medulloblastoma	21979893	CNVD
Wilms tumour	21544195	CNVD
Breast cancer	17133270	CNVD
Non-small cell lung cancer	21044232	CNVD
Cervical cancer	21063398	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	20632083	CNVD
Endometrial cancer	22040021	CNVD
Ewing''s sarcoma	21437220	CNVD
Gastrointestinal stromal cancer	20470368	CNVD
Glioblastoma multiforme	19960244	CNVD
Glioblastoma multiforme	21080181	CNVD
Hepatocellular carcinoma	22174799	CNVD
Medulloblastoma	21292688	CNVD
Phyllodes tumor	17334353	CNVD
Breast cancer	21264507	CNVD
Liposarcoma	21253554	CNVD
Multiple myeloma	21628407	CNVD
Cancer	16751803	CNVD
Prostate cancer	16705090	CNVD
Neuroblastoma	19435921	CNVD
Breast cancer	17850661	CNVD
Breast cancer	16461572	CNVD
Intracranial tumor	16823260	CNVD
Medulloblastoma	18056178	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Primary mediastinal b-cell lymphoma	17728785	CNVD
Colorectal cancer	16272173	CNVD
Neuroblastoma	21899760	CNVD
Acute lymphoblastic leukemia	21980252	CNVD
Breast cancer	16608533	CNVD
Ewing''s sarcoma	22429812	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Breast cancer	17001317	CNVD
Acute myeloid leukemia	20729466	CNVD
Testicular germ cell tumor	18059402	CNVD
Neuroblastoma	18923191	CNVD
Acute lymphoblastic leukemia	19100363	CNVD
Breast cancer	21509527	CNVD
Urothelial carcinoma	21177765	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Hepatocellular carcinoma	18803288	CNVD
Urothelial tumor	18831757	CNVD
Lung cancer	18438408	CNVD
Medulloblastoma	16783165	CNVD
Basal cell lymphoma	17170743	CNVD
Basal cell lymphoma	17053054	CNVD
Congenital abnormalities	21549014	CNVD
Developmental delay	21549014	CNVD
Mental retardation	21549014	CNVD
small cell lung cancer	20016488	CNVD
Cancer	20164920	CNVD
Cancer	17060936	CNVD
abnormal development	18461090	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Non-small cell lung cancer	21829676	CNVD
Multiple myeloma	16616336	CNVD
Ovarian cancer	21720365	CNVD
Glioblastoma multiforme	22291905	CNVD
Myelofibrosis	22110671	CNVD
Disease	21936942	CNVD
laryngomalacia	21936942	CNVD
GLUT3 deficiency syndrome	20509907	CNVD
Developmental delay	21373258	CNVD
Acute lymphoblastic leukemia	17443227	CNVD
Developmental delay	19490664	CNVD
Acute lymphoblastic leukemia	21098271	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Cutaneous malignant melanoma	18794153	CNVD
Astrocytoma	17934521	CNVD
Neurocytoma	17123091	CNVD
Central neurocytomas	17123091	CNVD
Breast cancer	20409316	CNVD
Fibroblasts	17951408	CNVD
Lung cancer	17951408	CNVD
Schizophrenia	20967226	CNVD
Schizophrenia	19805367	CNVD
Cancer	20164919	CNVD
Breast cancer	22522925	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD
Ovarian clear cell carcinoma	21343371	CNVD

Chromatin state (count:392 , 50 per page) page: 1 2 3 4 5 6 7 8

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:246680200-246682400	Weak transcription	Right Atrium	heart
2	chr1:246680600-246683000	ZNF genes & repeats	iPS DF 19.11 Cell Line	embryonic stem cell
3	chr1:246681600-246681800	Bivalent/Poised TSS	Foreskin Fibroblast Primary Cells skin02	Skin
4	chr1:246685400-246685600	ZNF genes & repeats	iPS DF 19.11 Cell Line	embryonic stem cell
5	chr1:246685600-246687600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
6	chr1:246686200-246686400	Bivalent Enhancer	HepG2	liver
7	chr1:246687400-246687600	Bivalent Enhancer	HepG2	liver
8	chr1:246687600-246687800	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
9	chr1:246687800-246689800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
10	chr1:246689800-246690000	ZNF genes & repeats	iPS DF 19.11 Cell Line	embryonic stem cell
11	chr1:246689800-246690000	Enhancers	Esophagus	oesophagus
12	chr1:246689800-246690400	Active TSS	HepG2	liver
13	chr1:246690000-246690800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
14	chr1:246690000-246692600	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
15	chr1:246690200-246690400	ZNF genes & repeats	Primary hematopoietic stem cells short term culture	blood
16	chr1:246690400-246690600	Flanking Active TSS	Primary hematopoietic stem cells short term culture	blood
17	chr1:246690400-246690600	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin
18	chr1:246690400-246690600	Enhancers	Monocytes-CD14+_RO01746	blood
19	chr1:246690400-246690800	Flanking Active TSS	HepG2	liver
20	chr1:246690400-246691000	Enhancers	Gastric	stomach
21	chr1:246690400-246691200	Enhancers	Lung	lung
22	chr1:246690400-246691400	ZNF genes & repeats	GM12878-XiMat	blood
23	chr1:246690400-246691600	Enhancers	Primary T cells fromperipheralblood	blood
24	chr1:246690400-246691600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
25	chr1:246690400-246691600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
26	chr1:246690400-246691800	ZNF genes & repeats	Primary monocytes fromperipheralblood	blood
27	chr1:246690400-246693000	Enhancers	HMEC	breast
28	chr1:246690600-246690800	Enhancers	Primary hematopoietic stem cells short term culture	blood
29	chr1:246690600-246691000	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
30	chr1:246690600-246691200	Enhancers	Primary B cells from peripheral blood	blood
31	chr1:246690600-246691200	Enhancers	Stomach Mucosa	stomach
32	chr1:246690600-246691400	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
33	chr1:246690600-246691400	Enhancers	Primary neutrophils fromperipheralblood	blood
34	chr1:246690600-246691400	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
35	chr1:246690600-246691400	Enhancers	Esophagus	oesophagus
36	chr1:246690600-246691400	Enhancers	Spleen	Spleen
37	chr1:246690600-246691400	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
38	chr1:246690600-246691600	Enhancers	Primary T killer naive cells fromperipheralblood	blood
39	chr1:246690800-246691000	Active TSS	HepG2	liver
40	chr1:246690800-246691200	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
41	chr1:246690800-246691200	Enhancers	Primary T helper cells PMA-I stimulated	--
42	chr1:246690800-246691200	Enhancers	Primary T helper 17 cells PMA-I stimulated	--
43	chr1:246690800-246691200	Enhancers	Primary mononuclear cells fromperipheralblood	Blood
44	chr1:246690800-246691200	Enhancers	Sigmoid Colon	Sigmoid Colon
45	chr1:246690800-246691400	ZNF genes & repeats	iPS DF 19.11 Cell Line	embryonic stem cell
46	chr1:246690800-246691400	Flanking Active TSS	Primary hematopoietic stem cells short term culture	blood
47	chr1:246690800-246691400	Enhancers	Primary T regulatory cells fromperipheralblood	blood
48	chr1:246691000-246691400	Enhancers	Primary T killer memory cells from peripheral blood	blood
49	chr1:246691000-246691400	ZNF genes & repeats	Foreskin Melanocyte Primary Cells skin01	Skin
50	chr1:246691000-246691400	Flanking Bivalent TSS/Enh	HepG2	liver

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