Variant report

Variant	nsv549912
Chromosome Location	chr10:6566975-6629225
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:736)
CpG islands
(count:978)
Chromatin interactive
region (count:19)
LncRNA
region (count:48)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:736 , 50 per page) page: 1 2 3 4 5 6 7 ... 15

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr10:6582073-6582085	K562	blood:	n/a	n/a
2	ARID3A	chr10:6582364-6582479	K562	blood:	n/a	n/a
3	ARID3A	chr10:6622605-6622859	K562	blood:	n/a	n/a
4	ATF1	chr10:6623714-6624085	K562	blood:	n/a	n/a
5	ATF1	chr10:6580442-6580635	K562	blood:	n/a	n/a
6	ATF1	chr10:6604657-6604835	K562	blood:	n/a	n/a
7	BACH1	chr10:6623768-6624090	H1-hESC	embryonic stem cell:	n/a	n/a
8	BACH1	chr10:6621659-6621859	H1-hESC	embryonic stem cell:	n/a	n/a
9	BHLHE40	chr10:6585641-6585650	K562	blood:	n/a	n/a
10	BHLHE40	chr10:6622292-6622566	GM12878	blood:	n/a	n/a
11	BHLHE40	chr10:6600814-6601019	GM12878	blood:	n/a	n/a
12	BHLHE40	chr10:6605866-6605987	GM12878	blood:	n/a	n/a
13	BHLHE40	chr10:6585388-6585593	GM12878	blood:	n/a	n/a
14	BHLHE40	chr10:6623336-6623480	K562	blood:	n/a	n/a
15	BHLHE40	chr10:6622010-6622036	K562	blood:	n/a	n/a
16	BHLHE40	chr10:6622254-6622873	K562	blood:	n/a	n/a
17	CCNT2	chr10:6621587-6621775	K562	blood:	n/a	chr10:6621651-6621660
18	CCNT2	chr10:6623763-6624172	K562	blood:	n/a	n/a
19	CCNT2	chr10:6621977-6622685	K562	blood:	n/a	n/a
20	CEBPB	chr10:6587582-6587671	A549	lung:	n/a	chr10:6587633-6587644
21	CEBPB	chr10:6582207-6582362	HepG2	liver:	n/a	chr10:6582264-6582275
22	CEBPB	chr10:6587542-6587744	HepG2	liver:	n/a	chr10:6587633-6587644
23	CEBPB	chr10:6582130-6582402	K562	blood:	n/a	chr10:6582264-6582275
24	CEBPB	chr10:6621568-6621873	H1-hESC	embryonic stem cell:	n/a	n/a
25	CEBPB	chr10:6587630-6587706	K562	blood:	n/a	chr10:6587633-6587644
26	CEBPB	chr10:6622622-6622660	H1-hESC	embryonic stem cell:	n/a	n/a
27	CEBPD	chr10:6622246-6622670	HepG2	liver:	n/a	n/a
28	CHD1	chr10:6622432-6622493	GM12878	blood:	n/a	n/a
29	CHD1	chr10:6621644-6621965	H1-hESC	embryonic stem cell:	n/a	n/a
30	CHD1	chr10:6616870-6616877	GM12878	blood:	n/a	n/a
31	CHD1	chr10:6585029-6585098	GM12878	blood:	n/a	n/a
32	CHD1	chr10:6585386-6585560	GM12878	blood:	n/a	n/a
33	CHD2	chr10:6622339-6622809	K562	blood:	n/a	n/a
34	CHD2	chr10:6622296-6622371	Hela-S3	cervix:	n/a	n/a
35	CHD2	chr10:6622353-6622547	H1-hESC	embryonic stem cell:	n/a	n/a
36	CHD2	chr10:6622281-6622603	GM12878	blood:	n/a	n/a
37	CHD2	chr10:6585449-6585701	GM12878	blood:	n/a	n/a
38	CHD2	chr10:6622511-6622524	HepG2	liver:	n/a	n/a
39	CREB1	chr10:6621820-6622516	A549	lung:	n/a	n/a
40	CTBP2	chr10:6621783-6622568	H1-hESC	embryonic stem cell:	n/a	n/a
41	CTCF	chr10:6622237-6622458	GM13976	blood:	n/a	chr10:6622327-6622340 chr10:6622325-6622341 chr10:6622329-6622339 chr10:6622324-6622342 chr10:6622327-6622336 chr10:6622327-6622340
42	CTCF	chr10:6622240-6622390	BJ	skin:	n/a	chr10:6622327-6622340 chr10:6622325-6622341 chr10:6622329-6622339 chr10:6622324-6622342 chr10:6622327-6622336 chr10:6622327-6622340
43	CTCF	chr10:6622614-6622660	GM12892	blood:	n/a	n/a
44	CTCF	chr10:6622280-6622430	A549	lung:	n/a	chr10:6622327-6622340 chr10:6622325-6622341 chr10:6622329-6622339 chr10:6622324-6622342 chr10:6622327-6622336 chr10:6622327-6622340
45	CTCF	chr10:6622260-6622410	HMEC	breast:	n/a	chr10:6622327-6622340 chr10:6622325-6622341 chr10:6622329-6622339 chr10:6622324-6622342 chr10:6622327-6622336 chr10:6622327-6622340
46	CTCF	chr10:6622300-6622450	GM12872	blood:	n/a	chr10:6622327-6622340 chr10:6622325-6622341 chr10:6622329-6622339 chr10:6622324-6622342 chr10:6622327-6622336 chr10:6622327-6622340
47	CTCF	chr10:6622300-6622450	HEEpiC	esophagus:	n/a	chr10:6622327-6622340 chr10:6622325-6622341 chr10:6622329-6622339 chr10:6622324-6622342 chr10:6622327-6622336 chr10:6622327-6622340
48	CTCF	chr10:6621920-6622070	HMEC	breast:	n/a	n/a
49	CTCF	chr10:6622240-6622390	GM12878	blood:	n/a	chr10:6622327-6622340 chr10:6622325-6622341 chr10:6622329-6622339 chr10:6622324-6622342 chr10:6622327-6622336 chr10:6622327-6622340
50	CTCF	chr10:6621720-6621870	HRE	kidney:	n/a	n/a

(count:978 , 50 per page) page: 1 2 3 4 5 6 7 ... 20

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr10:6621965-6622015	NHDF-neo	bronchial:	n/a
2	chr10:6605133-6605183	GM12878	blood:	n/a
3	chr10:6621965-6622015	NHDF-neo	bronchial:	n/a
4	chr10:6605133-6605183	GM12878	blood:	n/a
5	chr10:6625489-6625539	H1-hESC	embryonic stem cell:	embryo
6	chr10:6622555-6622605	H1-hESC	embryonic stem cell:	embryo
7	chr10:6618723-6618773	HRCEpiC	kidney:	n/a
8	chr10:6622566-6622616	SKMC	muscle:	n/a
9	chr10:6569373-6569423	HUVEC	blood vessel:	n/a
10	chr10:6569802-6569852	HEK293	kidney:	embryo
11	chr10:6622425-6622475	IMR90	lung:	fetal
12	chr10:6622433-6622483	AG04449	skin:	fetal
13	chr10:6618723-6618773	SK-N-MC	brain:	n/a
14	chr10:6622425-6622475	HCT-116	colon:	n/a
15	chr10:6620572-6620622	HPAEpiC	pulmonary alveolar:	n/a
16	chr10:6622433-6622483	HEK293	kidney:	embryo
17	chr10:6569373-6569423	GM06990	blood:	n/a
18	chr10:6569802-6569852	ProgFib	skin:	n/a
19	chr10:6569373-6569423	ProgFib	skin:	n/a
20	chr10:6569802-6569852	HCF	heart:	n/a
21	chr10:6620572-6620622	NHDF-neo	bronchial:	n/a
22	chr10:6622294-6622344	U87	brain:	n/a
23	chr10:6622338-6622388	PFSK-1	brain:	n/a
24	chr10:6569802-6569852	SK-N-SH	brain:	n/a
25	chr10:6618723-6618773	HUVEC	blood vessel:	n/a
26	chr10:6569373-6569423	RPTEC	kidney:	n/a
27	chr10:6621965-6622015	SK-N-SH_RA	brain:	n/a
28	chr10:6622279-6622329	HCM	heart:	n/a
29	chr10:6622338-6622388	ECC-1	luminal epithelium:	n/a
30	chr10:6622338-6622388	H1-hESC	embryonic stem cell:	embryo
31	chr10:6622555-6622605	HL-60	blood:	n/a
32	chr10:6622338-6622388	HRE	kidney:	n/a
33	chr10:6622279-6622329	GM12878	blood:	n/a
34	chr10:6625489-6625539	NH-A	brain:	n/a
35	chr10:6622555-6622605	HEK293	kidney:	embryo
36	chr10:6622777-6622827	HRCEpiC	kidney:	n/a
37	chr10:6605133-6605183	Jurkat	blood:	n/a
38	chr10:6622425-6622475	GM12891	blood:	n/a
39	chr10:6569802-6569852	HCT-116	colon:	n/a
40	chr10:6622297-6622347	T-47D	breast:	n/a
41	chr10:6618723-6618773	AG04449	skin:	fetal
42	chr10:6618723-6618773	GM19239	blood:	n/a
43	chr10:6569802-6569852	ovcar-3	ovarian:	n/a
44	chr10:6622297-6622347	PFSK-1	brain:	n/a
45	chr10:6622279-6622329	LNCaP	prostate:	n/a
46	chr10:6622555-6622605	K562	blood:	n/a
47	chr10:6622338-6622388	BJ	skin:	n/a
48	chr10:6618723-6618773	MCF-7	breast:	n/a
49	chr10:6622279-6622329	HL-60	blood:	n/a
50	chr10:6622555-6622605	HCPEpiC	choroid plexus:	n/a

(count:19 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr10:6621943..6622542-chr10:79788940..79789512,2	HCT-116	colon:
2	chr10:6597741..6599502-chr10:6604927..6608310,3	K562	blood:
3	chr10:6614415..6616986-chr10:6653036..6655207,2	K562	blood:
4	chr10:6515152..6516947-chr10:6622919..6625201,2	K562	blood:
5	chr10:6604463..6608131-chr10:6610996..6613327,3	K562	blood:
6	chr10:6512429..6514623-chr10:6584225..6586145,2	K562	blood:
7	chr10:6604463..6608131-chr10:6610996..6613327,3	K562	blood:
8	chr10:6609497..6611829-chr10:6619257..6621117,3	K562	blood:
9	chr10:6626015..6627588-chr10:6644565..6646079,2	K562	blood:
10	chr10:6130983..6133585-chr10:6620139..6622430,2	K562	blood:
11	chr10:6609497..6611829-chr10:6619257..6621117,3	K562	blood:
12	chr10:6628915..6631404-chr10:6645074..6647662,2	K562	blood:
13	chr10:6604463..6606991-chr10:6610996..6612929,2	K562	blood:
14	chr10:6608183..6609850-chr10:6610684..6612265,2	K562	blood:
15	chr10:6572483..6574395-chr10:6574703..6577680,4	K562	blood:
16	chr10:6597741..6599502-chr10:6604927..6608310,3	K562	blood:
17	chr10:6604463..6606991-chr10:6610996..6612929,2	K562	blood:
18	chr10:6572483..6574395-chr10:6574703..6577680,4	K562	blood:
19	chr10:6608183..6609850-chr10:6610684..6612265,2	K562	blood:

(count:48 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-AL137145.1-2	chr10:6622470-6622889	XLOC_008370
2	lnc-AL137145.1-2	chr10:6626080-6629206	NONHSAT011229
3	lnc-AL137145.1-2	chr10:6625638-6630358	XLOC_008370
4	lnc-AL137145.1-2	chr10:6627520-6627665	XLOC_008370
5	lnc-AL137145.1-2	chr10:6624100-6624163	ENSG00000237943
6	lnc-AL137145.1-2	chr10:6625638-6627323	XLOC_008370
7	lnc-AL137145.1-2	chr10:6625641-6625880	XLOC_008370
8	lnc-AL137145.1-2	chr10:6622387-6622889	ENSG00000237943
9	lnc-AL137145.1-2	chr10:6625638-6625880	XLOC_008370
10	lnc-AL137145.1-2	chr10:6622361-6622889	XLOC_008370
11	lnc-AL137145.1-2	chr10:6624100-6624163	XLOC_008370
12	lnc-AL137145.1-2	chr10:6622457-6622889	XLOC_008370
13	lnc-PRKCQ-3	chr10:6626925-6627320	NONHSAT011234
14	lnc-AL137145.1-2	chr10:6627520-6627674	ENSG00000237943.2
15	lnc-AL137145.1-2	chr10:6628725-6628842	ENSG00000237943.2
16	lnc-AL137145.1-2	chr10:6625638-6625880	XLOC_008370
17	lnc-IL2RA-7	chr10:6607132-6609178	ucscGeneNc_uc001ijk_1
18	lnc-AL137145.1-2	chr10:6622387-6622889	XLOC_008370
19	lnc-AL137145.1-2	chr10:6625767-6625880	ENSG00000237943.2
20	lnc-AL137145.1-2	chr10:6628133-6629012	NONHSAT011235
21	lnc-PRKCQ-3	chr10:6625641-6626263	NONHSAT011234
22	lnc-AL137145.1-2	chr10:6622387-6622889	NONHSAT139952
23	lnc-AL137145.1-2	chr10:6627760-6629063	XLOC_008370
24	lnc-AL137145.1-2	chr10:6625638-6625880	XLOC_008370
25	lnc-AL137145.1-2	chr10:6625767-6626157	ENSG00000237943.2
26	lnc-AL137145.1-2	chr10:6622470-6622889	XLOC_008370
27	lnc-AL137145.1-2	chr10:6622381-6622889	ENSG00000237943
28	lnc-AL137145.1-2	chr10:6626080-6627674	XLOC_008370
29	lnc-AL137145.1-2	chr10:6626080-6626260	XLOC_008370
30	lnc-AL137145.1-2	chr10:6626080-6626254	XLOC_008370
31	lnc-AL137145.1-2	chr10:6622488-6622889	XLOC_008370
32	lnc-AL137145.1-2	chr10:6622361-6622889	XLOC_008370
33	lnc-AL137145.1-2	chr10:6627760-6629063	XLOC_008370
34	lnc-AL137145.1-2	chr10:6625638-6626261	ENSG00000237943
35	lnc-AL137145.1-2	chr10:6626080-6626247	XLOC_008370
36	lnc-IL2RA-6	chr10:6567126-6569172	NONHSAT011226
37	lnc-AL137145.1-2	chr10:6625638-6627674	XLOC_008370
38	lnc-AL137145.1-2	chr10:6627520-6627674	ENSG00000237943.2
39	lnc-AL137145.1-2	chr10:6628186-6628882	ENSG00000259812.1
40	lnc-AL137145.1-2	chr10:6625638-6625880	NONHSAT011229
41	lnc-AL137145.1-2	chr10:6622405-6622889	NONHSAT011229
42	lnc-AL137145.1-2	chr10:6627520-6627641	XLOC_008370
43	lnc-AL137145.1-2	chr10:6625638-6625994	XLOC_008370
44	lnc-AL137145.1-2	chr10:6625638-6627323	NONHSAT139952
45	lnc-AL137145.1-2	chr10:6624100-6624163	NONHSAT139952
46	lnc-AL137145.1-2	chr10:6624100-6624163	XLOC_008370
47	lnc-AL137145.1-2	chr10:6625638-6625990	ENSG00000237943
48	lnc-AL137145.1-2	chr10:6625638-6625880	XLOC_008370

No data

Variant related genes	Relation type
PRKCQ	TF binding region
PRKCQ-AS1	TF binding region
PRKCQ	CpG island
PRKCQ-AS1	CpG island
ENSG00000148606	chromatin interactions
ENSG00000134453	chromatin interactions
RPL27A	miRNA target sites
NME4	miRNA target sites
C7orf31	miRNA target sites
LPP	miRNA target sites
RAB30	miRNA target sites
MDM4	miRNA target sites
CLSTN1	miRNA target sites
RAB34	miRNA target sites
ZNF317	miRNA target sites
LASS2	miRNA target sites
WWTR1	miRNA target sites

Extended variants
information (count: 2467 )
Associated
traits (count: 62 )

Variant overlapped rSNPs/rCNVs (count:2467 , 50 per page) page: 1 2 3 4 5 6 7 ... 50

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs4357599	chr10:6566975-6566976	Weak transcription Genic enhancers Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
2	rs142655004	chr10:6566992-6566993	Weak transcription Genic enhancers Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs568488729	chr10:6566994-6566995	Weak transcription Genic enhancers Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs535556565	chr10:6567031-6567032	Strong transcription Weak transcription Genic enhancers Enhancers	n/a	n/a	Overlapped CNVs	n/a
5	rs146698841	chr10:6567082-6567083	Strong transcription Weak transcription Genic enhancers Enhancers	n/a	n/a	Overlapped CNVs	n/a
6	rs555467033	chr10:6567111-6567112	Strong transcription Weak transcription Genic enhancers Enhancers	n/a	n/a	Overlapped CNVs	n/a
7	rs78865041	chr10:6567124-6567125	Strong transcription Weak transcription Genic enhancers Enhancers	n/a	n/a	Overlapped CNVs	n/a
8	rs55673084	chr10:6567125-6567126	Strong transcription Weak transcription Genic enhancers Enhancers	n/a	n/a	Overlapped CNVs	n/a
9	rs534068506	chr10:6567149-6567150	Strong transcription Weak transcription Genic enhancers Enhancers	lncRNA	n/a	Overlapped CNVs	n/a
10	rs57543694	chr10:6567162-6567163	Strong transcription Weak transcription Genic enhancers Enhancers	lncRNA	n/a	Overlapped CNVs	n/a
11	rs139276486	chr10:6567164-6567165	Strong transcription Weak transcription Genic enhancers Enhancers	lncRNA	n/a	Overlapped CNVs	n/a
12	rs61841279	chr10:6567244-6567245	Strong transcription Weak transcription Genic enhancers Enhancers	lncRNA	n/a	Overlapped CNVs	n/a
13	rs494202	chr10:6567258-6567259	Strong transcription Weak transcription Genic enhancers Enhancers	lncRNA	n/a	Overlapped CNVs	n/a
14	rs550765229	chr10:6567266-6567267	Strong transcription Weak transcription Genic enhancers Enhancers	lncRNA	n/a	Overlapped CNVs	n/a
15	rs558448368	chr10:6567275-6567276	Strong transcription Weak transcription Genic enhancers Enhancers	lncRNA	n/a	Overlapped CNVs	n/a
16	rs11259378	chr10:6567291-6567292	Strong transcription Weak transcription Genic enhancers Enhancers	lncRNA	n/a	Overlapped CNVs	n/a
17	rs569104337	chr10:6567382-6567383	Strong transcription Weak transcription Genic enhancers Enhancers	lncRNA	n/a	Overlapped CNVs	n/a
18	rs573590325	chr10:6567383-6567384	Strong transcription Weak transcription Genic enhancers Enhancers	lncRNA	n/a	Overlapped CNVs	n/a
19	rs190085906	chr10:6567463-6567464	Strong transcription Weak transcription Genic enhancers Enhancers	lncRNA	n/a	Overlapped CNVs	n/a
20	rs141190428	chr10:6567465-6567466	Strong transcription Weak transcription Genic enhancers Enhancers	lncRNA	n/a	Overlapped CNVs	n/a
21	rs78573626	chr10:6567505-6567506	Strong transcription Weak transcription Genic enhancers Enhancers	lncRNA	n/a	Overlapped CNVs	n/a
22	rs732879	chr10:6567506-6567507	Strong transcription Weak transcription Genic enhancers Enhancers	lncRNA	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
23	rs570425024	chr10:6567512-6567513	Strong transcription Weak transcription Genic enhancers Enhancers	lncRNA	n/a	Overlapped CNVs	n/a
24	rs150335580	chr10:6567517-6567518	Strong transcription Weak transcription Genic enhancers Enhancers	lncRNA	n/a	Overlapped CNVs	n/a
25	rs544806538	chr10:6567567-6567568	Strong transcription Weak transcription Genic enhancers Enhancers	lncRNA	n/a	Overlapped CNVs	n/a
26	rs559974150	chr10:6567658-6567659	Strong transcription Weak transcription Genic enhancers Enhancers	lncRNA	n/a	Overlapped CNVs	n/a
27	rs527578525	chr10:6567659-6567660	Strong transcription Weak transcription Genic enhancers Enhancers	lncRNA	n/a	Overlapped CNVs	n/a
28	rs181098654	chr10:6567680-6567681	Strong transcription Weak transcription Genic enhancers Enhancers	lncRNA	n/a	Overlapped CNVs	n/a
29	rs553694892	chr10:6567694-6567695	Strong transcription Weak transcription Genic enhancers Enhancers	lncRNA	n/a	Overlapped CNVs	n/a
30	rs113856941	chr10:6567733-6567734	Strong transcription Weak transcription Genic enhancers Enhancers	lncRNA	n/a	Overlapped CNVs	n/a
31	rs550772936	chr10:6567735-6567736	Strong transcription Weak transcription Genic enhancers Enhancers	lncRNA	n/a	Overlapped CNVs	n/a
32	rs184216631	chr10:6567772-6567773	Strong transcription Weak transcription Genic enhancers Enhancers	lncRNA	n/a	Overlapped CNVs	n/a
33	rs569339355	chr10:6567816-6567817	Strong transcription Weak transcription Genic enhancers Enhancers	lncRNA	n/a	Overlapped CNVs	n/a
34	rs745316	chr10:6567828-6567829	Strong transcription Weak transcription Genic enhancers Enhancers	lncRNA	n/a	Overlapped CNVs	n/a
35	rs533526541	chr10:6567870-6567871	Strong transcription Weak transcription Genic enhancers Enhancers	lncRNA	n/a	Overlapped CNVs	n/a
36	rs551992886	chr10:6567932-6567933	Strong transcription Weak transcription Genic enhancers Enhancers	lncRNA	n/a	Overlapped CNVs	n/a
37	rs567115413	chr10:6567947-6567948	Strong transcription Weak transcription Genic enhancers Enhancers	lncRNA	n/a	Overlapped CNVs	n/a
38	rs149447465	chr10:6567968-6567969	Strong transcription Weak transcription Genic enhancers Enhancers	lncRNA	n/a	Overlapped CNVs	n/a
39	rs368246676	chr10:6567974-6567975	Strong transcription Weak transcription Genic enhancers Enhancers	lncRNA	n/a	Overlapped CNVs	n/a
40	rs567116086	chr10:6567994-6567995	Strong transcription Weak transcription Genic enhancers Enhancers	lncRNA	n/a	Overlapped CNVs	n/a
41	rs11259387	chr10:6568048-6568049	Strong transcription Weak transcription Genic enhancers Enhancers	lncRNA	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
42	rs56023494	chr10:6568070-6568071	Strong transcription Weak transcription Genic enhancers Enhancers	lncRNA	n/a	Overlapped CNVs	n/a
43	rs577328026	chr10:6568085-6568086	Strong transcription Weak transcription Genic enhancers Enhancers	lncRNA	n/a	Overlapped CNVs	n/a
44	rs544752094	chr10:6568102-6568103	Strong transcription Weak transcription Genic enhancers Enhancers	lncRNA	n/a	Overlapped CNVs	n/a
45	rs188854807	chr10:6568109-6568110	Strong transcription Weak transcription Genic enhancers Enhancers	lncRNA	n/a	Overlapped CNVs	n/a
46	rs553530137	chr10:6568147-6568148	Strong transcription Weak transcription Genic enhancers Enhancers	lncRNA	n/a	Overlapped CNVs	n/a
47	rs1571966	chr10:6568151-6568152	Strong transcription Weak transcription Genic enhancers Enhancers	lncRNA	n/a	Overlapped CNVs	n/a
48	rs574790616	chr10:6568166-6568167	Strong transcription Weak transcription Genic enhancers Enhancers	lncRNA	n/a	Overlapped CNVs	n/a
49	rs571945203	chr10:6568169-6568170	Strong transcription Weak transcription Genic enhancers Enhancers	lncRNA	n/a	Overlapped CNVs	n/a
50	rs4750565	chr10:6568201-6568202	Strong transcription Weak transcription Genic enhancers Enhancers	lncRNA	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance

Variant related diseases (count:62)

Disease	PMID	Source
Sudden cardiac death	19188705	CNVD
Digeorge syndrome	22283845	CNVD
Cancer	21129771	CNVD
Colorectal cancer	20709793	CNVD
Wilms tumour	19047088	CNVD
Hepatocellular carcinoma	16750200	CNVD
Acute myeloid leukemia	16864856	CNVD
Cancer	21183584	CNVD
Barakat syndrome	22470819	CNVD
Melanoma	18172304	CNVD
Ovarian cancer	21720365	CNVD
Autism	18414403	CNVD
Malignant melanoma	18718029	CNVD
Breast cancer	22032731	CNVD
Medulloblastoma	16783165	CNVD
Breast cancer	17133270	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Breast cancer	17603634	CNVD
Endometrial cancer	22040021	CNVD
Glioblastoma multiforme	21080181	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Phyllodes tumor	17334353	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Pancreatic endocrine tumor	17639061	CNVD
Gastric cancer	17908304	CNVD
Chordoma	21602918	CNVD
Ewing''s sarcoma	21437220	CNVD
Medulloblastoma	21979893	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
small cell lung cancer	20016488	CNVD
Lung cancer	18438408	CNVD
Thoracic aortic aneurysm	21092924	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
Ewing''s sarcoma	17952124	CNVD
Oral cancer	21386901	CNVD
Breast cancer	21785460	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Prostate cancer	18632612	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Breast cancer	21858162	CNVD
Breast cancer	21364760	CNVD
Acute lymphoblastic leukemia	20724749	CNVD
Autism	22495311	CNVD
Renal cell carcinoma	18765545	CNVD
lymphocytic leukemia	21291569	CNVD
Urothelial cell carcinoma	18451213	CNVD
Myelofibrosis	22110671	CNVD
Glioblastoma multiforme	22286061	CNVD
Myxofibrosarcoma	16751306	CNVD
Non-muscle invasive bladder neoplasm	19445696	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Lung cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Pancreatic cancer	17952125	CNVD
Breast cancer	22522925	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD
Mantle cell lymphoma	19029149	CNVD

Chromatin state (count:1807 , 50 per page) page: 1 2 3 4 5 6 7 ... 37

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:6510000-6572000	Weak transcription	iPS-15b Cell Line	embryonic stem cell
2	chr10:6553200-6571400	Weak transcription	Pancreas	Pancrea
3	chr10:6557400-6582400	Weak transcription	Dnd41	blood
4	chr10:6558800-6579400	Weak transcription	Primary hematopoietic stem cells	blood
5	chr10:6561200-6568400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
6	chr10:6561600-6568200	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
7	chr10:6561600-6570400	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
8	chr10:6562600-6572200	Weak transcription	HUES6 Cell Line	embryonic stem cell
9	chr10:6562800-6580000	Weak transcription	Skeletal Muscle Male	skeletal muscle
10	chr10:6563000-6579200	Weak transcription	Primary hematopoietic stem cells short term culture	blood
11	chr10:6563200-6568200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
12	chr10:6563400-6567600	Weak transcription	K562	blood
13	chr10:6563400-6568400	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
14	chr10:6563400-6568600	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
15	chr10:6563800-6567000	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
16	chr10:6563800-6567600	Weak transcription	Primary T cells from cord blood	blood
17	chr10:6565000-6567800	Weak transcription	Primary T killer memory cells from peripheral blood	blood
18	chr10:6565200-6569200	Strong transcription	Fetal Thymus	thymus
19	chr10:6565400-6569000	Genic enhancers	Primary T cells fromperipheralblood	blood
20	chr10:6565600-6568000	Enhancers	Primary T helper cells fromperipheralblood	blood
21	chr10:6565800-6567200	Enhancers	Primary T helper cells PMA-I stimulated	--
22	chr10:6566000-6567600	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
23	chr10:6566000-6567800	Strong transcription	Primary T regulatory cells fromperipheralblood	blood
24	chr10:6566000-6568400	Genic enhancers	Primary T helper naive cells from peripheral blood	blood
25	chr10:6566000-6571600	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
26	chr10:6566400-6567000	Enhancers	Primary T helper 17 cells PMA-I stimulated	--
27	chr10:6566400-6568200	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
28	chr10:6566400-6569000	Strong transcription	Primary Natural Killer cells fromperipheralblood	blood
29	chr10:6566600-6567000	Enhancers	Primary T killer naive cells fromperipheralblood	blood
30	chr10:6566600-6569200	Strong transcription	Thymus	Thymus
31	chr10:6567000-6567600	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
32	chr10:6567000-6568400	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
33	chr10:6567000-6569000	Strong transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
34	chr10:6567200-6568800	Genic enhancers	Primary T helper cells PMA-I stimulated	--
35	chr10:6567600-6568000	Enhancers	K562	blood
36	chr10:6567600-6568800	Genic enhancers	Primary T helper memory cells from peripheral blood 2	blood
37	chr10:6567600-6569000	Strong transcription	Primary T cells from cord blood	blood
38	chr10:6567600-6569200	Genic enhancers	Primary T helper 17 cells PMA-I stimulated	--
39	chr10:6567800-6568000	Enhancers	Primary T killer memory cells from peripheral blood	blood
40	chr10:6567800-6569000	Genic enhancers	Primary T regulatory cells fromperipheralblood	blood
41	chr10:6568000-6568600	Weak transcription	Primary T helper cells fromperipheralblood	blood
42	chr10:6568000-6569200	Weak transcription	Primary T killer memory cells from peripheral blood	blood
43	chr10:6568000-6581200	Weak transcription	K562	blood
44	chr10:6568200-6568600	Genic enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
45	chr10:6568200-6568800	Strong transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
46	chr10:6568200-6569000	Strong transcription	Primary mononuclear cells fromperipheralblood	Blood
47	chr10:6568400-6568600	Enhancers	Esophagus	oesophagus
48	chr10:6568400-6568800	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
49	chr10:6568400-6569400	Weak transcription	Primary T helper naive cells from peripheral blood	blood
50	chr10:6568400-6571200	Enhancers	Primary T helper naive cells fromperipheralblood	blood

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