Variant report

Variant	nsv552016
Chromosome Location	chr10:96872731-96874416
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 55 )
Associated
traits (count: 69 )

Variant overlapped rSNPs/rCNVs (count:55 , 50 per page) page: 1 2

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs184684244	chr10:96872785-96872786	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
2	rs562171576	chr10:96872794-96872795	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs78169338	chr10:96872834-96872835	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs188903737	chr10:96872842-96872843	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs192519099	chr10:96872891-96872892	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs540412690	chr10:96872895-96872896	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs564394129	chr10:96872902-96872903	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs554250130	chr10:96872936-96872937	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs576797862	chr10:96872940-96872941	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs545809112	chr10:96872950-96872951	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs117389797	chr10:96872963-96872964	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs185434120	chr10:96873021-96873022	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs560538117	chr10:96873114-96873115	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs112309553	chr10:96873169-96873170	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs543608033	chr10:96873187-96873188	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs76592985	chr10:96873276-96873277	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs141172521	chr10:96873290-96873291	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs371047986	chr10:96873293-96873294	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs551703447	chr10:96873374-96873375	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs113544663	chr10:96873396-96873397	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs202063865	chr10:96873397-96873398	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs200084361	chr10:96873400-96873401	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs369152358	chr10:96873402-96873403	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs58050252	chr10:96873403-96873404	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs397697943	chr10:96873419-96873420	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs75484194	chr10:96873423-96873424	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs532648164	chr10:96873492-96873493	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs113410316	chr10:96873545-96873546	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs553532970	chr10:96873561-96873562	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs527893436	chr10:96873567-96873568	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs547127372	chr10:96873602-96873603	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs567231449	chr10:96873617-96873618	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs184469752	chr10:96873748-96873749	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs188715263	chr10:96873762-96873763	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs373241847	chr10:96873902-96873903	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs181058456	chr10:96873921-96873922	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs542512458	chr10:96873948-96873949	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs201448028	chr10:96873954-96873955	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs570585831	chr10:96873958-96873959	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs185884854	chr10:96873959-96873960	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs112322332	chr10:96873987-96873988	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs560321758	chr10:96874011-96874012	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs137961503	chr10:96874046-96874047	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs190388593	chr10:96874101-96874102	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs562952654	chr10:96874128-96874129	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs569945910	chr10:96874154-96874155	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs117229974	chr10:96874224-96874225	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs551641023	chr10:96874257-96874258	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs571462858	chr10:96874300-96874301	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs149487981	chr10:96874319-96874320	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:69)

Disease	PMID	Source
Gastric cancer	17908304	CNVD
Chordoma	21602918	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Medulloblastoma	21979893	CNVD
Melanoma	18172304	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
Ewing''s sarcoma	17952124	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Acute lymphoblastic leukemia	20724749	CNVD
Autism	22495311	CNVD
Prostate cancer	18632612	CNVD
Cockayne syndrome	18421352	CNVD
Glioblastoma	16823260	CNVD
Medulloblastoma	16968546	CNVD
Neuroblastoma	17533364	CNVD
Squamous cell cancer	21044232	CNVD
Glioma	21971842	CNVD
Cancer	21637783	CNVD
Non-small cell lung cancer	21044232	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Colorectal cancer	20709793	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Liposarcoma	21253554	CNVD
Oligodendroglial tumors	17285580	CNVD
Lung cancer	18438408	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Usher syndrome	20538994	CNVD
Medulloblastoma	16783165	CNVD
Breast cancer	21785460	CNVD
Acute myeloid leukemia	20729466	CNVD
Prostate cancer	16573809	CNVD
Paraganglioma	17535989	CNVD
Submicroscopic aberration syndrome	21292638	CNVD
Gastrointestinal stromal cancer	17535989	CNVD
Pancreatic endocrine tumor	17639061	CNVD
Pulmonary chondroma	17535989	CNVD
Colorectal cancer	18645599	CNVD
Polyposis syndrome	18645599	CNVD
Prostate cancer	17245344	CNVD
Glioblastoma multiforme	17369134	CNVD
Glioblastoma multiforme	21750150	CNVD
Breast cancer	22032731	CNVD
Ovarian cancer	20844748	CNVD
Glioblastoma multiforme	17002787	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	17603634	CNVD
Glioblastoma multiforme	17387387	CNVD
Breast cancer	21364760	CNVD
High-grade prostatic intraepithelial neoplasia	16573809	CNVD
Wilms tumour	21544195	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Urothelial carcinoma	21177765	CNVD
Breast cancer	16397240	CNVD
Chronic lymphocytic leukemia	21049055	CNVD
Cervical cancer	21062161	CNVD
Non-small cell lung cancer	21829676	CNVD
Melanoma	24453001	CNVD
Breast cancer	16608533	CNVD
Intracranial aneurysm	16715129	CNVD
Myelofibrosis	22110671	CNVD
Glioblastoma multiforme	22286061	CNVD
small cell lung cancer	20016488	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:96871600-96876200	Weak transcription	HepG2	liver

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