Variant report

Variant	nsv553179
Chromosome Location	chr11:4806872-4910224
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:328)
CpG islands
(count:977)
Chromatin interactive
region (count:27)
LncRNA
region (count:2)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:328 , 50 per page) page: 1 2 3 4 5 6 7

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ATF1	chr11:4903288-4903949	K562	blood:	n/a	n/a
2	BACH1	chr11:4903312-4903361	K562	blood:	n/a	n/a
3	BHLHE40	chr11:4903370-4903912	K562	blood:	n/a	n/a
4	CBX3	chr11:4903266-4903716	K562	blood:	n/a	n/a
5	CCNT2	chr11:4903333-4904063	K562	blood:	n/a	n/a
6	CEBPB	chr11:4845499-4845699	K562	blood:	n/a	chr11:4845553-4845564
7	CEBPB	chr11:4884836-4885140	H1-hESC	embryonic stem cell:	n/a	chr11:4884971-4884982 chr11:4884971-4884984
8	CEBPB	chr11:4845401-4845737	IMR90	lung:	n/a	chr11:4845553-4845564
9	CEBPB	chr11:4903325-4903673	K562	blood:	n/a	n/a
10	CEBPB	chr11:4884811-4885319	HepG2	liver:	n/a	chr11:4884971-4884982 chr11:4884971-4884984
11	CEBPB	chr11:4848087-4848331	A549	lung:	n/a	n/a
12	CEBPB	chr11:4845429-4845720	HepG2	liver:	n/a	chr11:4845553-4845564
13	CEBPB	chr11:4847965-4848232	K562	blood:	n/a	chr11:4848050-4848061
14	CEBPB	chr11:4903071-4903449	IMR90	lung:	n/a	n/a
15	CEBPB	chr11:4815769-4815953	K562	blood:	n/a	n/a
16	CEBPB	chr11:4845391-4845677	A549	lung:	n/a	chr11:4845553-4845564
17	CEBPB	chr11:4903137-4903989	K562	blood:	n/a	n/a
18	CEBPB	chr11:4811479-4811616	K562	blood:	n/a	n/a
19	CEBPB	chr11:4847987-4848334	HepG2	liver:	n/a	chr11:4848050-4848061
20	CEBPB	chr11:4884835-4885128	A549	lung:	n/a	chr11:4884971-4884982 chr11:4884971-4884984
21	CEBPD	chr11:4903302-4904220	K562	blood:	n/a	n/a
22	CEBPD	chr11:4903295-4903815	K562	blood:	n/a	n/a
23	CHD2	chr11:4846254-4846282	K562	blood:	n/a	n/a
24	CTCF	chr11:4847803-4848029	LNCaP	prostate:	n/a	n/a
25	CTCF	chr11:4847820-4847970	HRE	kidney:	n/a	n/a
26	CTCF	chr11:4847860-4848010	RPTEC	kidney:	n/a	n/a
27	CTCF	chr11:4847792-4847979	K562	blood:	n/a	n/a
28	CTCF	chr11:4847820-4847970	GM12869	blood:	n/a	n/a
29	CTCF	chr11:4847803-4847951	HepG2	liver:	n/a	n/a
30	CTCF	chr11:4847825-4848004	K562	blood:	n/a	n/a
31	CTCF	chr11:4870240-4870390	GM12866	blood:	n/a	n/a
32	CTCF	chr11:4847911-4847987	GM10248	blood:	n/a	n/a
33	CTCF	chr11:4847840-4847990	NB4	blood:	n/a	n/a
34	CTCF	chr11:4847760-4847910	HMF	breast:	n/a	n/a
35	CTCF	chr11:4847840-4847990	A549	lung:	n/a	n/a
36	CTCF	chr11:4820319-4820345	GM10248	blood:	n/a	n/a
37	CTCF	chr11:4847860-4848010	NHDF-neo	bronchial:	n/a	n/a
38	CTCF	chr11:4847880-4848030	WI-38	lung:	n/a	n/a
39	CTCF	chr11:4847760-4847910	GM12872	blood:	n/a	n/a
40	CTCF	chr11:4861260-4861410	HEK293	kidney:	n/a	n/a
41	CTCF	chr11:4847683-4848150	HCT-116	colon:	n/a	n/a
42	CTCF	chr11:4847780-4847930	NHEK	skin:	n/a	n/a
43	CTCF	chr11:4847840-4847990	HVMF	connective:	n/a	n/a
44	CTCF	chr11:4847742-4848063	K562	blood:	n/a	n/a
45	CTCF	chr11:4861160-4861310	GM12872	blood:	n/a	n/a
46	CTCF	chr11:4847780-4847930	Caco-2	colon:	n/a	n/a
47	CTCF	chr11:4847841-4847983	ProgFib	skin:	n/a	n/a
48	CTCF	chr11:4870300-4870450	HepG2	liver:	n/a	n/a
49	CTCF	chr11:4847820-4847970	NHDF-neo	bronchial:	n/a	n/a
50	CTCF	chr11:4847860-4848010	GM12873	blood:	n/a	n/a

(count:977 , 50 per page) page: 1 2 3 4 5 6 7 ... 20

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr11:4825815-4825865	HEK293	kidney:	embryo
2	chr11:4825815-4825865	HEK293	kidney:	embryo
3	chr11:4842355-4842405	HRCEpiC	kidney:	n/a
4	chr11:4824704-4824754	BE2_C	brain:	n/a
5	chr11:4824704-4824754	T-47D	breast:	n/a
6	chr11:4870453-4870503	AG10803	skin:	n/a
7	chr11:4902491-4902541	HNPCEpiC	eye:	n/a
8	chr11:4825815-4825865	HPAEpiC	pulmonary alveolar:	n/a
9	chr11:4903155-4903205	SK-N-SH_RA	brain:	n/a
10	chr11:4871411-4871461	AG10803	skin:	n/a
11	chr11:4841204-4841254	Caco-2	colon:	n/a
12	chr11:4902583-4902633	NHBE	bronchial:	n/a
13	chr11:4902491-4902541	SK-N-SH_RA	brain:	n/a
14	chr11:4870255-4870305	U87	brain:	n/a
15	chr11:4824704-4824754	K562	blood:	n/a
16	chr11:4842355-4842405	SKMC	muscle:	n/a
17	chr11:4871411-4871461	SKMC	muscle:	n/a
18	chr11:4871411-4871461	RPTEC	kidney:	n/a
19	chr11:4869963-4870013	HepG2	liver:	n/a
20	chr11:4903155-4903205	NB4	blood:	n/a
21	chr11:4870453-4870503	AG09319	gingival:	n/a
22	chr11:4825232-4825282	GM12891	blood:	n/a
23	chr11:4869963-4870013	ProgFib	skin:	n/a
24	chr11:4825640-4825690	HCPEpiC	choroid plexus:	n/a
25	chr11:4902464-4902514	AG04449	skin:	fetal
26	chr11:4825815-4825865	AG09309	skin:	n/a
27	chr11:4825640-4825690	HPAEpiC	pulmonary alveolar:	n/a
28	chr11:4870255-4870305	HL-60	blood:	n/a
29	chr11:4824704-4824754	PrEC	prostate:	n/a
30	chr11:4902491-4902541	AG09319	gingival:	n/a
31	chr11:4902464-4902514	SK-N-MC	brain:	n/a
32	chr11:4903155-4903205	Hela-S3	cervix:	n/a
33	chr11:4825232-4825282	HUVEC	blood vessel:	n/a
34	chr11:4842355-4842405	Jurkat	blood:	n/a
35	chr11:4841204-4841254	AoSMC	blood vessel:	n/a
36	chr11:4902464-4902514	PANC-1	pancreas:	n/a
37	chr11:4825232-4825282	AG04449	skin:	fetal
38	chr11:4902464-4902514	Hepatocyte	liver:	n/a
39	chr11:4871411-4871461	PFSK-1	brain:	n/a
40	chr11:4825640-4825690	SK-N-SH	brain:	n/a
41	chr11:4825232-4825282	HCPEpiC	choroid plexus:	n/a
42	chr11:4843021-4843071	U87	brain:	n/a
43	chr11:4842355-4842405	SAEC	small airway:	n/a
44	chr11:4902464-4902514	NH-A	brain:	n/a
45	chr11:4870453-4870503	ProgFib	skin:	n/a
46	chr11:4825640-4825690	ProgFib	skin:	n/a
47	chr11:4842355-4842405	GM19239	blood:	n/a
48	chr11:4902464-4902514	HCF	heart:	n/a
49	chr11:4843021-4843071	SK-N-SH_RA	brain:	n/a
50	chr11:4841204-4841254	Jurkat	blood:	n/a

(count:27 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type	Cell Stage
1	11:4886992-4893242..11:5714465-5718134	K562	blood:
2	chr11:4887759..4889897-chr11:4893466..4895197,2	K562	blood:
3	chr11:4789671..4792092-chr11:4812812..4815235,2	K562	blood:
4	11:4820112-4824892..11:5527719-5533869	H1-hESC	embryonic stem cell:	embryo
5	chr11:4822926..4825841-chr11:4830287..4832476,2	K562	blood:
6	11:4849537-4851766..11:5527719-5533869	H1-hESC	embryonic stem cell:	embryo
7	chr11:4899835..4902548-chr11:4904411..4907145,2	K562	blood:
8	chr11:4817686..4819750-chr11:4821906..4823690,2	K562	blood:
9	chr11:4822926..4825696-chr11:4829994..4831787,2	K562	blood:
10	11:4801044-4820112..11:5700314-5707362	H1-hESC	embryonic stem cell:	embryo
11	chr11:4884965..4887784-chr11:4890382..4892090,2	K562	blood:
12	11:4820112-4824892..11:5018576-5020673	H1-hESC	embryonic stem cell:	embryo
13	chr11:4657833..4658473-chr11:4847439..4848013,2	MCF-7	breast:
14	11:4886992-4893242..11:5700314-5707362	Hela-S3	cervix:
15	11:4886992-4893242..11:5721056-5732713	K562	blood:
16	11:4820112-4824892..11:5721056-5732713	H1-hESC	embryonic stem cell:	embryo
17	chr11:4855919..4858881-chr11:4862668..4864924,2	MCF-7	breast:
18	chr11:4894111..4896171-chr11:4899276..4901453,2	K562	blood:
19	chr11:4806483..4808284-chr11:4810226..4812694,2	K562	blood:
20	chr11:4817686..4819750-chr11:4821906..4823690,2	K562	blood:
21	11:4869840-4870943..11:4870943-4872364	Hela-S3	cervix:
22	chr11:4899835..4902548-chr11:4904411..4907145,2	K562	blood:
23	11:4820112-4824892..11:5700314-5707362	K562	blood:
24	chr11:4887759..4889897-chr11:4893466..4895197,2	K562	blood:
25	chr11:4855919..4858881-chr11:4862668..4864924,2	MCF-7	breast:
26	chr11:4884965..4887784-chr11:4890382..4892090,2	K562	blood:
27	chr11:4894111..4896171-chr11:4899276..4901453,2	K562	blood:

(count:2 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-OR52R1-1	chr11:4816146-4816514	NONHSAT017656
2	lnc-OR52R1-1	chr11:4815008-4815466	NONHSAT017656

No data

Variant related genes	Relation type
OR51S1	TF binding region
OR51N1P	TF binding region
OR52R1	TF binding region
OR51A8P	TF binding region
OR52Y1P	TF binding region
OR51T1	TF binding region
OR51H1P	TF binding region
OR51F2	TF binding region
OR51H2P	TF binding region
OR51S1	CpG island
OR51N1P	CpG island
OR52R1	CpG island
OR51A8P	CpG island
OR52Y1P	CpG island
OR51T1	CpG island
OR51H1P	CpG island
OR51F2	CpG island
OR51H2P	CpG island
ENSG00000176951	chromatin interactions
ENSG00000132274	chromatin interactions
ENSG00000188069	chromatin interactions
ENSG00000176922	chromatin interactions
ENSG00000175520	chromatin interactions
ENSG00000176798	chromatin interactions
ENSG00000176937	chromatin interactions
ENSG00000132256	chromatin interactions

Extended variants
information (count: 2305 )
Associated
traits (count: 67 )

Variant overlapped rSNPs/rCNVs (count:2305 , 50 per page) page: 1 2 3 4 5 6 7 ... 47

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs12806476	chr11:4806872-4806873	Inactive region	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
2	rs567275623	chr11:4806977-4806978	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
3	rs550605284	chr11:4806997-4806998	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
4	rs570564718	chr11:4807027-4807028	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
5	rs12801757	chr11:4807054-4807055	Inactive region	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
6	rs371717973	chr11:4807075-4807076	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
7	rs71480268	chr11:4807090-4807091	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
8	rs2412432	chr11:4807092-4807093	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
9	rs184425802	chr11:4807110-4807111	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
10	rs369575178	chr11:4807171-4807172	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
11	rs188387082	chr11:4807186-4807187	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
12	rs34238074	chr11:4807199-4807200	Inactive region	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
13	rs369272371	chr11:4807209-4807210	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
14	rs577550456	chr11:4807211-4807212	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
15	rs114604593	chr11:4807246-4807247	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
16	rs529256144	chr11:4807274-4807275	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
17	rs145704480	chr11:4807278-4807279	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
18	rs73399067	chr11:4807301-4807302	Inactive region	TF binding region Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
19	rs79533604	chr11:4807308-4807309	Inactive region	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
20	rs559742253	chr11:4807322-4807323	Inactive region	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
21	rs77937412	chr11:4807368-4807369	Inactive region	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
22	rs1368828	chr11:4807374-4807375	Inactive region	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
23	rs1368827	chr11:4807383-4807384	Inactive region	TF binding region Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
24	rs111642236	chr11:4807385-4807386	Inactive region	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
25	rs4569002	chr11:4807387-4807388	Inactive region	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
26	rs1368826	chr11:4807392-4807393	Inactive region	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
27	rs114722936	chr11:4807419-4807420	Inactive region	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
28	rs16938617	chr11:4807447-4807448	Inactive region	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
29	rs531107630	chr11:4807507-4807508	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
30	rs17325477	chr11:4807512-4807513	Inactive region	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
31	rs115676130	chr11:4807535-4807536	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
32	rs16938619	chr11:4807548-4807549	Inactive region	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
33	rs571249800	chr11:4807558-4807559	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
34	rs538940643	chr11:4807589-4807590	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
35	rs17227809	chr11:4807618-4807619	Inactive region	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
36	rs181870211	chr11:4807638-4807639	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
37	rs565128737	chr11:4807645-4807646	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
38	rs540182712	chr11:4807656-4807657	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
39	rs371146812	chr11:4807716-4807717	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
40	rs397849613	chr11:4807724-4807725	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
41	rs111702518	chr11:4807728-4807729	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
42	rs140950716	chr11:4807739-4807740	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
43	rs550835364	chr11:4807750-4807751	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
44	rs66987352	chr11:4807752-4807753	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
45	rs554331125	chr11:4807773-4807774	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
46	rs58698481	chr11:4807784-4807785	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
47	rs544276994	chr11:4807787-4807788	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
48	rs118136036	chr11:4807794-4807795	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
49	rs577923484	chr11:4807920-4807921	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
50	rs545687852	chr11:4807928-4807929	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:67)

Disease	PMID	Source
Neuroblastoma	18923191	CNVD
Breast cancer	19432969	CNVD
Alzheimer''s disease	17576883	CNVD
Long-qt syndrome	17576883	CNVD
Emphysema	19352772	CNVD
Invasive pancreatic ductal carcinoma	16982739	CNVD
Chordoma	18071362	CNVD
Breast cancer	16608533	CNVD
Cancer	21183584	CNVD
Gastric adenocarcinoma	19115996	CNVD
Hepatocellular carcinoma	16750200	CNVD
Burkitt''s lymphoma	19759907	CNVD
Breast cancer	17603634	CNVD
Medulloblastoma	21979893	CNVD
Thyroid cancer	19087340	CNVD
Melanoma	18172304	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Wilms tumour	21544195	CNVD
Parathyroid adenoma	22454399	CNVD
Chordoma	21602918	CNVD
Breast cancer	21949216	CNVD
Cancer	21637783	CNVD
Non-syndromic sensorineural hearing loss	19222835	CNVD
T-cell acute lymphoblastic leukemia	20065082	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Endometrial cancer	22040021	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	21264507	CNVD
Beckwith-Wiedemann syndrome	21518781	CNVD
Wilms tumour	21518781	CNVD
Hepatoblastoma	21518781	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Gastrointestinal stromal cancer	17535989	CNVD
Paraganglioma	17535989	CNVD
Pulmonary chondroma	17535989	CNVD
Gastric cancer	17908304	CNVD
Barrett''s syndrome	19417022	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Multiple myeloma	20724749	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Lung cancer	18438408	CNVD
Autism	22495311	CNVD
Esophageal adenocarcinoma	18519675	CNVD
Ovine squamous-cell carcinoma	17599052	CNVD
Myelofibrosis	22110671	CNVD
Glioma	17123091	CNVD
Lung cancer	16773561	CNVD
Neuroblastoma	21124317	CNVD
Lung adenocarcinoma	17086460	CNVD
Lung cancer	17086460	CNVD
Schizophrenia	21399695	CNVD
Gastric cancer	16891809	CNVD
Cancer	17160897	CNVD
Multiple myeloma	16616336	CNVD
small cell lung cancer	20016488	CNVD
Breast cancer	21364760	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Breast cancer	22522925	CNVD
Bipolar disorder	19114987	CNVD
Schizophrenia	20967226	CNVD
Schizophrenia	23813976	CNVD
Pancreatic cancer	17952125	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD

Chromatin state (count:116 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:4808000-4808400	Enhancers	Breast Myoepithelial Primary Cells	Breast
2	chr11:4815400-4816200	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
3	chr11:4815800-4816000	Enhancers	Small Intestine	intestine
4	chr11:4816200-4820200	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
5	chr11:4816400-4816600	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin
6	chr11:4816400-4816800	Enhancers	Gastric	stomach
7	chr11:4816800-4817000	Weak transcription	Gastric	stomach
8	chr11:4817000-4817400	Enhancers	Gastric	stomach
9	chr11:4817200-4817400	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin
10	chr11:4817400-4821200	Weak transcription	Gastric	stomach
11	chr11:4817600-4817800	Enhancers	Stomach Mucosa	stomach
12	chr11:4818000-4818800	Enhancers	Sigmoid Colon	Sigmoid Colon
13	chr11:4818600-4818800	Enhancers	Stomach Mucosa	stomach
14	chr11:4820200-4820400	Enhancers	Stomach Mucosa	stomach
15	chr11:4820200-4821000	ZNF genes & repeats	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
16	chr11:4821200-4821600	Enhancers	Gastric	stomach
17	chr11:4821600-4825000	Weak transcription	Gastric	stomach
18	chr11:4824000-4826600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
19	chr11:4825000-4825200	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
20	chr11:4825000-4825200	Enhancers	Spleen	Spleen
21	chr11:4825000-4825400	Bivalent/Poised TSS	Brain Substantia Nigra	brain
22	chr11:4825000-4825400	Active TSS	Gastric	stomach
23	chr11:4840200-4842000	Enhancers	NHDF-Ad	bronchial
24	chr11:4840400-4842400	Enhancers	Muscle Satellite Cultured Cells	--
25	chr11:4840600-4842000	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
26	chr11:4840600-4842000	Enhancers	NHEK	skin
27	chr11:4841000-4842000	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
28	chr11:4841000-4842000	Enhancers	HMEC	breast
29	chr11:4841000-4842200	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
30	chr11:4842600-4843000	Active TSS	Brain Substantia Nigra	brain
31	chr11:4843000-4843200	Bivalent/Poised TSS	Brain Substantia Nigra	brain
32	chr11:4844800-4846200	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin
33	chr11:4845200-4846400	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
34	chr11:4852000-4852600	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
35	chr11:4856600-4857000	Enhancers	Rectal Smooth Muscle	rectum
36	chr11:4861400-4861800	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
37	chr11:4863600-4863800	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
38	chr11:4870000-4870400	Active TSS	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
39	chr11:4870000-4870600	Enhancers	Gastric	stomach
40	chr11:4870200-4870800	Enhancers	Liver	Liver
41	chr11:4870400-4871600	Enhancers	Fetal Heart	heart
42	chr11:4870800-4872200	Weak transcription	Liver	Liver
43	chr11:4871600-4872400	Weak transcription	Fetal Heart	heart
44	chr11:4872200-4872600	Enhancers	Liver	Liver
45	chr11:4872200-4872600	Enhancers	Right Ventricle	heart
46	chr11:4872400-4872600	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
47	chr11:4872400-4872600	Enhancers	Esophagus	oesophagus
48	chr11:4872400-4872600	Enhancers	Fetal Heart	heart
49	chr11:4872400-4872600	Enhancers	Gastric	stomach
50	chr11:4872400-4872600	Enhancers	Lung	lung

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links