Variant report

Variant nsv553586
Chromosome Location chr11:17559018-17599093
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:365 , 50 per page) page: 1 2 3 4 5 6 7 8
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:17538400-17562200 Weak transcription Small Intestine intestine
2 chr11:17547200-17563200 Genic enhancers Fetal Intestine Small intestine
3 chr11:17553600-17561800 Weak transcription Gastric stomach
4 chr11:17553600-17562200 Weak transcription H1 Cell Line embryonic stem cell
5 chr11:17553800-17563200 Weak transcription Colonic Mucosa Colon
6 chr11:17555400-17560400 Weak transcription Duodenum Mucosa Duodenum
7 chr11:17555800-17562400 Weak transcription Rectal Mucosa Donor 29 rectum
8 chr11:17558000-17563400 Weak transcription Hela-S3 cervix
9 chr11:17558200-17559800 Enhancers Stomach Mucosa stomach
10 chr11:17558400-17563200 Weak transcription Breast Myoepithelial Primary Cells Breast
11 chr11:17558800-17562200 Genic enhancers Fetal Intestine Large intestine
12 chr11:17559000-17561800 Weak transcription Rectal Mucosa Donor 31 rectum
13 chr11:17559600-17560600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
14 chr11:17559800-17560200 Enhancers iPS-18 Cell Line embryonic stem cell
15 chr11:17559800-17562000 Weak transcription Stomach Mucosa stomach
16 chr11:17560200-17560600 Bivalent Enhancer Fetal Muscle Trunk muscle
17 chr11:17560200-17562200 Weak transcription iPS-18 Cell Line embryonic stem cell
18 chr11:17560400-17562600 Enhancers Duodenum Mucosa Duodenum
19 chr11:17560600-17560800 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
20 chr11:17560800-17562000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
21 chr11:17561800-17562200 Enhancers Gastric stomach
22 chr11:17561800-17562800 Enhancers Sigmoid Colon Sigmoid Colon
23 chr11:17561800-17563000 Enhancers Rectal Mucosa Donor 31 rectum
24 chr11:17562000-17564000 Enhancers Stomach Mucosa stomach
25 chr11:17562000-17565200 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
26 chr11:17562200-17562400 Enhancers H1 Cell Line embryonic stem cell
27 chr11:17562200-17562400 Enhancers iPS-18 Cell Line embryonic stem cell
28 chr11:17562200-17562400 Transcr. at gene 5' and 3' Fetal Intestine Large intestine
29 chr11:17562200-17564400 Weak transcription Gastric stomach
30 chr11:17562400-17562600 Enhancers Small Intestine intestine
31 chr11:17562400-17562800 Flanking Active TSS Fetal Intestine Large intestine
32 chr11:17562400-17564400 Weak transcription H1 Cell Line embryonic stem cell
33 chr11:17562400-17566200 Active TSS Rectal Mucosa Donor 29 rectum
34 chr11:17562600-17562800 Flanking Active TSS Duodenum Mucosa Duodenum
35 chr11:17562600-17565000 Enhancers A549 lung
36 chr11:17562800-17563200 Active TSS Duodenum Mucosa Duodenum
37 chr11:17562800-17563200 Enhancers Fetal Intestine Large intestine
38 chr11:17562800-17563600 Enhancers HepG2 liver
39 chr11:17563000-17563400 Bivalent Enhancer Fetal Adrenal Gland Adrenal Gland
40 chr11:17563000-17563800 Flanking Active TSS Rectal Mucosa Donor 31 rectum
41 chr11:17563000-17564000 Enhancers Pancreatic Islets Pancreatic Islet
42 chr11:17563200-17563400 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
43 chr11:17563200-17563400 Transcr. at gene 5' and 3' Fetal Intestine Small intestine
44 chr11:17563200-17563600 Flanking Active TSS Duodenum Mucosa Duodenum
45 chr11:17563200-17563800 Enhancers Colonic Mucosa Colon
46 chr11:17563200-17563800 Flanking Active TSS Fetal Intestine Large intestine
47 chr11:17563200-17564400 Bivalent Enhancer Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
48 chr11:17563200-17565200 Enhancers Breast Myoepithelial Primary Cells Breast
49 chr11:17563200-17566200 Active TSS Rectal Smooth Muscle rectum
50 chr11:17563400-17563600 Flanking Active TSS Fetal Intestine Small intestine

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