Variant report

Variant	nsv553994
Chromosome Location	chr11:33065394-33476703
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:5708)
CpG islands
(count:4520)
Chromatin interactive
region (count:368)
LncRNA
region (count:22)
Mature miRNA
region (count: 0)
miRNA target
sites (count:16)

(count:5708 , 50 per page) page: 1 2 3 4 5 6 7 ... 115

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr11:33364523-33364723	K562	blood:	n/a	n/a
2	ARID3A	chr11:33278760-33279150	HepG2	liver:	n/a	n/a
3	ARID3A	chr11:33467294-33467606	HepG2	liver:	n/a	n/a
4	ARID3A	chr11:33288174-33288395	K562	blood:	n/a	n/a
5	ARID3A	chr11:33351286-33351649	K562	blood:	n/a	n/a
6	ARID3A	chr11:33233161-33233450	HepG2	liver:	n/a	n/a
7	ARID3A	chr11:33193183-33193188	K562	blood:	n/a	n/a
8	ARID3A	chr11:33169179-33169315	K562	blood:	n/a	n/a
9	ARID3A	chr11:33187666-33188187	K562	blood:	n/a	chr11:33188154-33188170
10	ARID3A	chr11:33087228-33087452	HepG2	liver:	n/a	n/a
11	ARID3A	chr11:33082889-33083186	HepG2	liver:	n/a	n/a
12	ARID3A	chr11:33277822-33278022	HepG2	liver:	n/a	n/a
13	ARID3A	chr11:33342559-33342940	K562	blood:	n/a	n/a
14	ARID3A	chr11:33201178-33201210	K562	blood:	n/a	n/a
15	ARID3A	chr11:33280061-33280282	K562	blood:	n/a	n/a
16	ARID3A	chr11:33383925-33384254	HepG2	liver:	n/a	n/a
17	ARID3A	chr11:33280804-33281150	K562	blood:	n/a	n/a
18	ARID3A	chr11:33182607-33183285	HepG2	liver:	n/a	n/a
19	ARID3A	chr11:33351288-33351628	HepG2	liver:	n/a	n/a
20	ARID3A	chr11:33229217-33229421	K562	blood:	n/a	n/a
21	ARID3A	chr11:33182051-33183545	K562	blood:	n/a	n/a
22	ARID3A	chr11:33187786-33188158	HepG2	liver:	n/a	n/a
23	ARID3A	chr11:33181198-33181511	K562	blood:	n/a	n/a
24	ARID3A	chr11:33288039-33288460	HepG2	liver:	n/a	n/a
25	ARID3A	chr11:33383912-33384198	K562	blood:	n/a	n/a
26	ARID3A	chr11:33280884-33281018	HepG2	liver:	n/a	n/a
27	ARID3A	chr11:33279537-33280483	HepG2	liver:	n/a	n/a
28	ARID3A	chr11:33204058-33204223	HepG2	liver:	n/a	n/a
29	ARID3A	chr11:33394101-33394301	HepG2	liver:	n/a	n/a
30	ATF1	chr11:33182918-33183497	K562	blood:	n/a	n/a
31	ATF1	chr11:33394198-33394335	K562	blood:	n/a	n/a
32	ATF1	chr11:33342458-33342912	K562	blood:	n/a	n/a
33	ATF1	chr11:33249480-33249846	K562	blood:	n/a	n/a
34	ATF1	chr11:33341606-33341888	K562	blood:	n/a	n/a
35	ATF1	chr11:33275258-33275288	K562	blood:	n/a	n/a
36	ATF1	chr11:33190481-33190793	K562	blood:	n/a	n/a
37	ATF1	chr11:33181115-33181435	K562	blood:	n/a	n/a
38	ATF1	chr11:33351332-33351614	K562	blood:	n/a	n/a
39	ATF1	chr11:33329665-33330069	K562	blood:	n/a	n/a
40	ATF2	chr11:33084755-33085573	GM12878	blood:	n/a	n/a
41	ATF2	chr11:33411036-33411671	GM12878	blood:	n/a	n/a
42	ATF2	chr11:33409042-33410013	GM12878	blood:	n/a	n/a
43	ATF2	chr11:33084702-33085604	GM12878	blood:	n/a	n/a
44	ATF2	chr11:33087103-33087525	H1-hESC	embryonic stem cell:	n/a	n/a
45	ATF2	chr11:33279439-33280494	GM12878	blood:	n/a	n/a
46	ATF2	chr11:33409013-33410089	GM12878	blood:	n/a	n/a
47	ATF2	chr11:33404441-33405009	GM12878	blood:	n/a	n/a
48	ATF2	chr11:33182564-33183612	H1-hESC	embryonic stem cell:	n/a	chr11:33183172-33183183
49	ATF2	chr11:33182677-33183409	GM12878	blood:	n/a	chr11:33183172-33183183
50	ATF2	chr11:33182750-33183468	GM12878	blood:	n/a	chr11:33183172-33183183

(count:4520 , 50 per page) page: 1 2 3 4 5 6 7 ... 91

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr11:33209645-33209695	AG10803	skin:	n/a
2	chr11:33199839-33199889	NHBE	bronchial:	n/a
3	chr11:33211414-33211464	LNCaP	prostate:	n/a
4	chr11:33084877-33084927	GM12878	blood:	n/a
5	chr11:33081126-33081176	HEK293	kidney:	embryo
6	chr11:33183213-33183263	AoSMC	blood vessel:	n/a
7	chr11:33209645-33209695	AG10803	skin:	n/a
8	chr11:33199839-33199889	NHBE	bronchial:	n/a
9	chr11:33211414-33211464	LNCaP	prostate:	n/a
10	chr11:33084877-33084927	GM12878	blood:	n/a
11	chr11:33081126-33081176	HEK293	kidney:	embryo
12	chr11:33183213-33183263	AoSMC	blood vessel:	n/a
13	chr11:33278679-33278729	AG09319	gingival:	n/a
14	chr11:33397689-33397739	HMEC	breast:	n/a
15	chr11:33182890-33182940	SAEC	small airway:	n/a
16	chr11:33101141-33101191	SK-N-MC	brain:	n/a
17	chr11:33442321-33442371	HUVEC	blood vessel:	n/a
18	chr11:33334443-33334493	PFSK-1	brain:	n/a
19	chr11:33397689-33397739	HAEpiC	amniotic membrane:	n/a
20	chr11:33282841-33282891	SK-N-SH	brain:	n/a
21	chr11:33396859-33396909	T-47D	breast:	n/a
22	chr11:33397689-33397739	ECC-1	luminal epithelium:	n/a
23	chr11:33183213-33183263	ovcar-3	ovarian:	n/a
24	chr11:33182894-33182944	NHDF-neo	bronchial:	n/a
25	chr11:33279899-33279949	HIPEpiC	eye:	n/a
26	chr11:33398173-33398223	PrEC	prostate:	n/a
27	chr11:33397689-33397739	GM12891	blood:	n/a
28	chr11:33397679-33397729	HCF	heart:	n/a
29	chr11:33308269-33308319	Hepatocyte	liver:	n/a
30	chr11:33396983-33397033	AG10803	skin:	n/a
31	chr11:33183108-33183158	HCPEpiC	choroid plexus:	n/a
32	chr11:33279091-33279141	HNPCEpiC	eye:	n/a
33	chr11:33398366-33398416	HIPEpiC	eye:	n/a
34	chr11:33453389-33453439	HCPEpiC	choroid plexus:	n/a
35	chr11:33183108-33183158	GM12878	blood:	n/a
36	chr11:33183473-33183523	AG04450	lung:	fetal
37	chr11:33183001-33183051	Hela-S3	cervix:	n/a
38	chr11:33095023-33095073	AG09319	gingival:	n/a
39	chr11:33442321-33442371	HAEpiC	amniotic membrane:	n/a
40	chr11:33397153-33397203	Hela-S3	cervix:	n/a
41	chr11:33081126-33081176	GM19239	blood:	n/a
42	chr11:33317039-33317089	NB4	blood:	n/a
43	chr11:33182894-33182944	BJ	skin:	n/a
44	chr11:33279252-33279302	GM12892	blood:	n/a
45	chr11:33183110-33183160	BE2_C	brain:	n/a
46	chr11:33398366-33398416	GM12891	blood:	n/a
47	chr11:33397679-33397729	SKMC	muscle:	n/a
48	chr11:33279252-33279302	NT2-D1	testis:	n/a
49	chr11:33264842-33264892	HNPCEpiC	eye:	n/a
50	chr11:33397821-33397871	NB4	blood:	n/a

(count:368 , 50 per page) page: 1 2 3 4 5 6 7 8

No.	Distal block	Cell Line	Cell type
1	chr11:33146192..33148602-chr11:33177101..33179018,2	K562	blood:
2	chr11:32913909..32915939-chr11:33072142..33075071,2	MCF-7	breast:
3	chr11:33308929..33311681-chr11:33352469..33354383,2	MCF-7	breast:
4	chr11:33188152..33190790-chr11:33192662..33194860,2	K562	blood:
5	chr11:33283955..33286219-chr11:33326919..33329577,2	K562	blood:
6	chr11:33187786..33191779-chr11:33278023..33282064,7	MCF-7	breast:
7	chr11:33323694..33328844-chr11:33341332..33344470,4	K562	blood:
8	chr11:33277797..33278342-chr14:60715056..60715739,2	Hela-S3	cervix:
9	chr11:33313913..33316207-chr11:33316446..33318411,2	MCF-7	breast:
10	chr11:32913171..32916144-chr11:33182605..33184521,3	K562	blood:
11	chr11:33133887..33136865-chr11:33162527..33165170,2	K562	blood:
12	chr11:797886..798445-chr11:33182179..33183133,2	HCT-116	colon:
13	chr11:33300069..33303546-chr11:33304515..33307878,3	K562	blood:
14	chr11:33279747..33280263-chrX:23801172..23801824,2	Hela-S3	cervix:
15	chr11:33277371..33280516-chr11:33349638..33353162,5	MCF-7	breast:
16	chr11:33181707..33184014-chr11:33222885..33224416,2	K562	blood:
17	chr11:33382588..33385319-chr11:33707872..33709435,2	MCF-7	breast:
18	chr11:33267480..33271185-chr11:33277468..33280694,5	MCF-7	breast:
19	chr11:33097286..33101981-chr11:33104595..33108523,4	K562	blood:
20	chr11:33277967..33280794-chr11:33331091..33333165,2	K562	blood:
21	chr11:33171924..33174713-chr11:33176095..33179551,3	MCF-7	breast:
22	chr11:33170533..33172129-chr11:33173815..33175713,2	MCF-7	breast:
23	chr11:33164859..33166687-chr11:33174794..33177697,2	K562	blood:
24	chr11:33137241..33139373-chr11:33181195..33183827,2	K562	blood:
25	chr11:33066540..33068366-chr11:33072316..33075265,3	K562	blood:
26	chr11:33187260..33188477-chr11:33350825..33351973,13	MCF-7	breast:
27	chr11:33164421..33166971-chr11:33277905..33280784,2	K562	blood:
28	chr11:33124155..33125831-chr11:33126964..33129155,2	K562	blood:
29	chr11:33184452..33186716-chr11:33277546..33280813,3	MCF-7	breast:
30	chr11:33223097..33225972-chr11:33277631..33280440,2	MCF-7	breast:
31	chr11:33347406..33349145-chr11:33350262..33352793,2	MCF-7	breast:
32	chr11:33432981..33435559-chr11:33436354..33439310,2	K562	blood:
33	chr11:33392077..33394205-chr11:33397342..33400084,3	K562	blood:
34	chr11:33180160..33183951-chr11:33277482..33283147,16	K562	blood:
35	chr11:33290160..33295323-chr11:33296264..33299611,6	K562	blood:
36	chr11:33278516..33280068-chr11:33740390..33742827,2	MCF-7	breast:
37	chr11:33144694..33146600-chr11:33148884..33151282,2	K562	blood:
38	chr11:33267892..33269409-chr11:33276644..33279476,3	MCF-7	breast:
39	chr11:33187528..33188393-chr11:33341292..33341979,2	K562	blood:
40	chr11:33164604..33166371-chr11:33178493..33180493,2	MCF-7	breast:
41	chr11:33272062..33275695-chr11:33277620..33281399,4	MCF-7	breast:
42	chr11:33360581..33362754-chr11:33365388..33367285,2	K562	blood:
43	chr11:33278310..33280237-chr11:33303017..33305023,2	MCF-7	breast:
44	chr11:33061344..33063655-chr11:33085932..33088755,2	MCF-7	breast:
45	chr11:33279345..33279976-chr6:27861115..27861730,2	Hela-S3	cervix:
46	chr11:33300641..33303261-chr11:33311159..33314863,3	K562	blood:
47	chr11:33370166..33372800-chr11:33374328..33376444,2	MCF-7	breast:
48	chr11:33351340..33351943-chr11:33383658..33384527,2	K562	blood:
49	chr11:32912949..32915416-chr11:33278689..33280447,2	MCF-7	breast:
50	chr11:33093701..33096269-chr11:33101527..33105812,4	K562	blood:

(count:22 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-CSTF3-5	chr11:33222131-33222464	NONHSAT018696
2	lnc-CSTF3-4	chr11:33212346-33212446	NONHSAT018694
3	lnc-TCP11L1-1	chr11:33211479-33213142	NONHSAT018691
4	lnc-CSTF3-4	chr11:33212459-33213144	NONHSAT018694
5	lnc-CSTF3-2	chr11:33097112-33098006	NONHSAT018687
6	lnc-TCP11L1-1	chr11:33211479-33213144	ENSG00000247151
7	lnc-TCP11L1-1	chr11:33210316-33210396	NONHSAT018691
8	lnc-TCP11L1-1	chr11:33210914-33211103	ENSG00000247151
9	lnc-TCP11L1-4	chr11:33334713-33335041	expReg_chr11_2985_+
10	lnc-CCDC73-5	chr11:33116283-33116906	expReg_chr11_2930_-
11	lnc-CSTF3-3	chr11:33211608-33212049	NONHSAT018693
12	lnc-TCP11L1-1	chr11:33211479-33211840	ENSG00000247151
13	lnc-TCP11L1-1	chr11:33210316-33210396	ENSG00000247151
14	lnc-HIPK3-2	chr11:33424762-33425151	NONHSAT018700
15	lnc-DEPDC7-2	chr11:33097696-33101000	NONHSAT018688
16	lnc-TCP11L1-1	chr11:33210914-33211103	NONHSAT018691
17	lnc-TCP11L1-1	chr11:33183234-33183327	ENSG00000247151
18	lnc-TCP11L1-1	chr11:33210316-33210396	ENSG00000247151
19	lnc-TCP11L1-1	chr11:33183203-33183327	ENSG00000247151
20	lnc-C11orf41-5	chr11:33472192-33472489	NONHSAT018701
21	lnc-TCP11L1-3	chr11:33333205-33333598	expReg_chr11_2971_+
22	lnc-TCP11L1-1	chr11:33183203-33183327	NONHSAT018691

No data

(count:16 , 50 per page) page: 1

No.	miRNA target gene	miRNA name	Chromosome Location
1	CSTF3	hsa-miR-124-3p	chr11:33106507-33106525
2	HIPK3	hsa-miR-92a-3p	chr11:33375228-33375234
3	HIPK3	hsa-miR-124-3p	chr11:33375651-33375670
4	HIPK3	hsa-miR-106a-5p	chr11:33375709-33375730
5	HIPK3	hsa-miR-19b-3p	chr11:33358682-33358704
6	HIPK3	hsa-miR-92a-3p	chr11:33375214-33375235
7	HIPK3	hsa-miR-335-5p	chr11:33375589-33375614
8	HIPK3	hsa-miR-92a-3p	chr11:33375388-33375409
9	HIPK3	hsa-miR-106a-5p	chr11:33375245-33375267
10	HIPK3	hsa-miR-20b-5p	chr11:33375245-33375267
11	HIPK3	hsa-miR-124-3p	chr11:33375376-33375395
12	HIPK3	hsa-miR-124-3p	chr11:33375663-33375670
13	HIPK3	hsa-miR-19b-3p	chr11:33375260-33375282
14	CSTF3	hsa-miR-124-3p	chr11:33106222-33106241
15	HIPK3	hsa-miR-19b-3p	chr11:33375275-33375282
16	HIPK3	hsa-miR-20b-5p	chr11:33375709-33375730

Variant related genes	Relation type
ENSG00000200485	TF binding region
ENSG00000206808	TF binding region
TCP11L1	TF binding region
HIPK3	TF binding region
RPL29P23	TF binding region
CSTF3	TF binding region
ENSG00000241255	TF binding region
PIGCP1	TF binding region
CSTF3-AS1	TF binding region
ENSG00000255207	TF binding region
ENSG00000254537	TF binding region
ENSG00000223134	TF binding region
ENSG00000200485	CpG island
ENSG00000206808	CpG island
TCP11L1	CpG island
HIPK3	CpG island
RPL29P23	CpG island
CSTF3	CpG island
ENSG00000241255	CpG island
PIGCP1	CpG island
CSTF3-AS1	CpG island
ENSG00000255207	CpG island
ENSG00000254537	CpG island
ENSG00000223134	CpG island
ENSG00000134294	chromatin interactions
ENSG00000236778	chromatin interactions
ENSG00000135378	chromatin interactions
ENSG00000247151	chromatin interactions
ENSG00000121690	chromatin interactions
ENSG00000132570	chromatin interactions
ENSG00000105479	chromatin interactions
ENSG00000177542	chromatin interactions
ENSG00000117335	chromatin interactions
ENSG00000176102	chromatin interactions
ENSG00000182718	chromatin interactions
ENSG00000111669	chromatin interactions
ENSG00000110422	chromatin interactions
ENSG00000272762	chromatin interactions
ENSG00000170899	chromatin interactions
ENSG00000141522	chromatin interactions
ENSG00000254537	chromatin interactions
ENSG00000028528	chromatin interactions
ENSG00000260924	chromatin interactions
ENSG00000199568	chromatin interactions
ENSG00000200485	chromatin interactions
ENSG00000202198	chromatin interactions
ENSG00000115904	chromatin interactions
ENSG00000085063	chromatin interactions
ENSG00000207972	chromatin interactions
ENSG00000079805	chromatin interactions
ENSG00000176148	chromatin interactions
ENSG00000196331	chromatin interactions
ENSG00000263004	chromatin interactions
ENSG00000128595	chromatin interactions
ENSG00000108846	chromatin interactions
ENSG00000060749	chromatin interactions
ENSG00000130066	chromatin interactions
ENSG00000213713	chromatin interactions
ENSG00000255207	chromatin interactions
ENSG00000175634	chromatin interactions
ENSG00000107745	chromatin interactions
ENSG00000206808	chromatin interactions
ENSG00000135387	chromatin interactions
ENSG00000114779	chromatin interactions
ENSG00000223134	chromatin interactions
ENSG00000102786	chromatin interactions
ENSG00000254718	chromatin interactions
ENSG00000248487	chromatin interactions
ENSG00000206573	chromatin interactions
MICALL1	miRNA target sites
NUP160	miRNA target sites
ERI2	miRNA target sites
ARID2	miRNA target sites
YWHAZ	miRNA target sites
PSME3	miRNA target sites

Extended variants
information (count: 14568 )
Associated
traits (count: 82 )

Variant overlapped rSNPs/rCNVs (count:14568 , 50 per page) page: 1 2 3 4 5 6 7 ... 292

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs1064005	chr11:33065394-33065395	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Enhancers Flanking Active TSS Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
2	rs187732111	chr11:33065395-33065396	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Enhancers Flanking Active TSS Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
3	rs117571357	chr11:33065414-33065415	Weak transcription Strong transcription Enhancers ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
4	rs528864660	chr11:33065441-33065442	Weak transcription Strong transcription Enhancers ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
5	rs548916244	chr11:33065451-33065452	Weak transcription Strong transcription Enhancers ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
6	rs568881738	chr11:33065459-33065460	Weak transcription Strong transcription Enhancers ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
7	rs112273344	chr11:33065479-33065480	Weak transcription Strong transcription Enhancers ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
8	rs367842925	chr11:33065502-33065503	Weak transcription Strong transcription Enhancers ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
9	rs368870869	chr11:33065512-33065513	Weak transcription Strong transcription Enhancers ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
10	rs192423984	chr11:33065524-33065525	Weak transcription Strong transcription Enhancers ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
11	rs7926030	chr11:33065547-33065548	Weak transcription Strong transcription Enhancers ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Flanking Active TSS	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
12	rs554117751	chr11:33065566-33065567	Weak transcription Strong transcription Enhancers ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
13	rs139464903	chr11:33065567-33065568	Weak transcription Strong transcription Enhancers ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
14	rs113526795	chr11:33065576-33065577	Weak transcription Strong transcription Enhancers ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
15	rs184808276	chr11:33065603-33065604	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Enhancers Transcr. at gene 5' and 3' Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
16	rs556488708	chr11:33065624-33065625	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Enhancers Transcr. at gene 5' and 3' Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
17	rs187282019	chr11:33065629-33065630	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Enhancers Transcr. at gene 5' and 3' Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
18	rs545461077	chr11:33065661-33065662	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Enhancers Transcr. at gene 5' and 3' Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
19	rs1998159	chr11:33065680-33065681	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Enhancers Transcr. at gene 5' and 3' Flanking Active TSS	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
20	rs577627875	chr11:33065690-33065691	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Enhancers Transcr. at gene 5' and 3' Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
21	rs79805215	chr11:33065705-33065706	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Enhancers Transcr. at gene 5' and 3' Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
22	rs192171218	chr11:33065715-33065716	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Enhancers Transcr. at gene 5' and 3' Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
23	rs201514835	chr11:33065847-33065848	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Enhancers Transcr. at gene 5' and 3' Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
24	rs140866614	chr11:33065858-33065859	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Enhancers Transcr. at gene 5' and 3' Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
25	rs112941026	chr11:33065859-33065860	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Enhancers Transcr. at gene 5' and 3' Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
26	rs200411878	chr11:33065861-33065862	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Enhancers Transcr. at gene 5' and 3' Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
27	rs12420798	chr11:33065878-33065879	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Enhancers Transcr. at gene 5' and 3' Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
28	rs184594808	chr11:33065896-33065897	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Enhancers Transcr. at gene 5' and 3' Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
29	rs530301812	chr11:33065907-33065908	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Enhancers Transcr. at gene 5' and 3' Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
30	rs550128478	chr11:33065952-33065953	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Enhancers Transcr. at gene 5' and 3' Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
31	rs542272184	chr11:33065976-33065977	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Enhancers Transcr. at gene 5' and 3' Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
32	rs562487470	chr11:33066000-33066001	Weak transcription ZNF genes & repeats Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3' Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
33	rs12420812	chr11:33066004-33066005	ZNF genes & repeats Strong transcription Weak transcription Genic enhancers Enhancers Transcr. at gene 5' and 3' Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
34	rs551448195	chr11:33066056-33066057	ZNF genes & repeats Strong transcription Weak transcription Genic enhancers Enhancers Transcr. at gene 5' and 3' Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
35	rs544792099	chr11:33066059-33066060	ZNF genes & repeats Strong transcription Weak transcription Genic enhancers Enhancers Transcr. at gene 5' and 3' Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
36	rs571323726	chr11:33066069-33066070	ZNF genes & repeats Strong transcription Weak transcription Genic enhancers Enhancers Transcr. at gene 5' and 3' Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
37	rs55930446	chr11:33066122-33066123	ZNF genes & repeats Strong transcription Weak transcription Genic enhancers Enhancers Transcr. at gene 5' and 3' Flanking Active TSS	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
38	rs189857856	chr11:33066168-33066169	ZNF genes & repeats Strong transcription Weak transcription Genic enhancers Enhancers Transcr. at gene 5' and 3' Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
39	rs567585401	chr11:33066198-33066199	ZNF genes & repeats Strong transcription Weak transcription Genic enhancers Enhancers Transcr. at gene 5' and 3' Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
40	rs536534398	chr11:33066239-33066240	ZNF genes & repeats Strong transcription Weak transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
41	rs529119144	chr11:33066329-33066330	ZNF genes & repeats Strong transcription Weak transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
42	rs558633422	chr11:33066331-33066332	ZNF genes & repeats Strong transcription Weak transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
43	rs556313365	chr11:33066384-33066385	ZNF genes & repeats Strong transcription Weak transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
44	rs570027611	chr11:33066401-33066402	ZNF genes & repeats Strong transcription Weak transcription Enhancers Genic enhancers Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
45	rs538794999	chr11:33066411-33066412	ZNF genes & repeats Strong transcription Weak transcription Enhancers Genic enhancers Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
46	rs140608667	chr11:33066461-33066462	ZNF genes & repeats Strong transcription Weak transcription Enhancers Genic enhancers Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
47	rs1033720	chr11:33066474-33066475	ZNF genes & repeats Strong transcription Weak transcription Enhancers Genic enhancers Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
48	rs368027311	chr11:33066509-33066510	ZNF genes & repeats Strong transcription Weak transcription Enhancers Genic enhancers Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
49	rs1033719	chr11:33066525-33066526	ZNF genes & repeats Strong transcription Weak transcription Enhancers Genic enhancers Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
50	rs1033718	chr11:33066548-33066549	ZNF genes & repeats Strong transcription Weak transcription Enhancers Genic enhancers Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance

Variant related diseases (count:82)

Disease	PMID	Source
Breast cancer	17603634	CNVD
Medulloblastoma	21979893	CNVD
Thyroid cancer	19087340	CNVD
Melanoma	18172304	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Wilms tumour	21544195	CNVD
Parathyroid adenoma	22454399	CNVD
Chordoma	21602918	CNVD
Breast cancer	21949216	CNVD
Cancer	21637783	CNVD
Non-syndromic sensorineural hearing loss	19222835	CNVD
T-cell acute lymphoblastic leukemia	20065082	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Endometrial cancer	22040021	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	21264507	CNVD
Beckwith-Wiedemann syndrome	21518781	CNVD
Wilms tumour	21518781	CNVD
Hepatoblastoma	21518781	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Gastrointestinal stromal cancer	17535989	CNVD
Paraganglioma	17535989	CNVD
Pulmonary chondroma	17535989	CNVD
Gastric cancer	17908304	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Multiple myeloma	20724749	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Autism	22495311	CNVD
Prostate cancer	18632612	CNVD
Lung cancer	18438408	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Non-small cell lung cancer	21385341	CNVD
Intellectual disability	22102821	CNVD
Breast cancer	21785460	CNVD
Medulloblastoma	16783165	CNVD
small cell lung cancer	20016488	CNVD
Renal cell carcinoma	18194544	CNVD
Potocki-Shaffer syndrome	19222835	CNVD
WAGR syndrome	19222835	CNVD
Chordoma	18071362	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Chronic lymphocytic leukemia	20421269	CNVD
Breast cancer	21364760	CNVD
Glioblastoma multiforme	22286061	CNVD
Aniridia syndrome	21572526	CNVD
Myelofibrosis	22110671	CNVD
Breast cancer	16272173	CNVD
Retinoblastoma	22278416	CNVD
Denys-drash syndrome	21085971	CNVD
T-cell acute lymphoblastic leukemia	18185524	CNVD
WAGR syndrome	16773131	CNVD
Disorders of sex development	22290220	CNVD
Aniridia syndrome	17204608	CNVD
Mental retardation	17204608	CNVD
WAGR syndrome	19617690	CNVD
genitourinary abnormalities	17204608	CNVD
Breast cancer	16397240	CNVD
Mental retardation	16773131	CNVD
Multiple myeloma	16616336	CNVD
Cancer	17160897	CNVD
Cancer	21183584	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
WAGR syndrome	22470819	CNVD
Neurodevelopmental disorder	22521361	CNVD
Denys-drash syndrome	19566914	CNVD
Familial wilms tumor	19566914	CNVD
Frasier syndrome	19566914	CNVD
Non-small cell lung cancer	21829676	CNVD
WAGR syndrome	20603712	CNVD
Autism	17322880	CNVD
Renal cell carcinoma	18765545	CNVD
Breast cancer	21858162	CNVD
Cancer	20164920	CNVD
Breast cancer	16620391	CNVD
Pancreatic cancer	17952125	CNVD
Breast cancer	22522925	CNVD
early-passage human iPS cells	21368824	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD

Chromatin state (count:9042 , 50 per page) page: 1 2 3 4 5 6 7 ... 181

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:33062000-33065400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
2	chr11:33062000-33065400	Weak transcription	Ovary	ovary
3	chr11:33062000-33066600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
4	chr11:33062000-33073000	Weak transcription	Stomach Mucosa	stomach
5	chr11:33062000-33081000	Weak transcription	Spleen	Spleen
6	chr11:33062000-33081400	Weak transcription	Gastric	stomach
7	chr11:33062000-33081800	Weak transcription	Esophagus	oesophagus
8	chr11:33062000-33093600	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
9	chr11:33062200-33065400	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
10	chr11:33062200-33065600	Weak transcription	Left Ventricle	heart
11	chr11:33062200-33065800	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
12	chr11:33062200-33065800	Weak transcription	Pancreas	Pancrea
13	chr11:33062200-33067000	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
14	chr11:33062200-33067400	Weak transcription	Small Intestine	intestine
15	chr11:33062200-33074200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
16	chr11:33062200-33079600	Weak transcription	Lung	lung
17	chr11:33062200-33079600	Weak transcription	Right Ventricle	heart
18	chr11:33062200-33085400	Weak transcription	Psoas Muscle	Psoas
19	chr11:33062400-33065400	Weak transcription	H9 Cell Line	embryonic stem cell
20	chr11:33062400-33065400	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
21	chr11:33062400-33065400	Weak transcription	Colonic Mucosa	Colon
22	chr11:33062400-33065400	Weak transcription	Fetal Muscle Trunk	muscle
23	chr11:33062600-33065400	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
24	chr11:33062600-33065400	Weak transcription	Aorta	Aorta
25	chr11:33062600-33065400	Weak transcription	Fetal Lung	lung
26	chr11:33062600-33065600	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
27	chr11:33062600-33065600	Weak transcription	Fetal Intestine Large	intestine
28	chr11:33062600-33065600	Weak transcription	Placenta	Placenta
29	chr11:33062600-33065800	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
30	chr11:33062600-33066800	Weak transcription	Primary B cells from cord blood	blood
31	chr11:33062600-33078400	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
32	chr11:33062600-33084800	Weak transcription	Primary T killer memory cells from peripheral blood	blood
33	chr11:33062600-33094200	Weak transcription	Fetal Heart	heart
34	chr11:33062800-33065400	Weak transcription	H1 Cell Line	embryonic stem cell
35	chr11:33062800-33065400	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
36	chr11:33062800-33065400	Weak transcription	HUES6 Cell Line	embryonic stem cell
37	chr11:33062800-33065400	Weak transcription	iPS-18 Cell Line	embryonic stem cell
38	chr11:33062800-33065400	Weak transcription	Primary monocytes fromperipheralblood	blood
39	chr11:33062800-33065400	Weak transcription	Primary hematopoietic stem cells	blood
40	chr11:33062800-33065400	Weak transcription	Primary hematopoietic stem cells short term culture	blood
41	chr11:33062800-33065400	Weak transcription	Primary T helper cells fromperipheralblood	blood
42	chr11:33062800-33065400	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
43	chr11:33062800-33065400	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
44	chr11:33062800-33065400	Weak transcription	Adipose Nuclei	Adipose
45	chr11:33062800-33065400	Weak transcription	Duodenum Mucosa	Duodenum
46	chr11:33062800-33065400	Weak transcription	Fetal Stomach	stomach
47	chr11:33062800-33065400	Weak transcription	Thymus	Thymus
48	chr11:33062800-33065400	Enhancers	Hela-S3	cervix
49	chr11:33062800-33065600	Weak transcription	Sigmoid Colon	Sigmoid Colon
50	chr11:33062800-33065800	Weak transcription	Skeletal Muscle Female	skeletal muscle

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