Variant report

Variant nsv554212
Chromosome Location chr11:48214992-48387275
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:129 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:48214000-48215200 Enhancers Osteobl bone
2 chr11:48214200-48215000 Weak transcription Left Ventricle heart
3 chr11:48214600-48215600 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
4 chr11:48215000-48215800 Enhancers NHDF-Ad bronchial
5 chr11:48215200-48215600 Enhancers NHLF lung
6 chr11:48215200-48215600 Flanking Active TSS Osteobl bone
7 chr11:48215200-48215800 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
8 chr11:48215600-48216000 Enhancers Osteobl bone
9 chr11:48231600-48232000 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
10 chr11:48250200-48250800 ZNF genes & repeats iPS DF 19.11 Cell Line embryonic stem cell
11 chr11:48283000-48285000 Enhancers GM12878-XiMat blood
12 chr11:48288800-48289000 ZNF genes & repeats H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
13 chr11:48293400-48294200 Bivalent Enhancer HUES6 Cell Line embryonic stem cell
14 chr11:48293600-48294200 Bivalent Enhancer ES-I3 Cell Line embryonic stem cell
15 chr11:48294000-48294400 Bivalent Enhancer ES-WA7 Cell Line embryonic stem cell
16 chr11:48294400-48295000 Bivalent/Poised TSS ES-WA7 Cell Line embryonic stem cell
17 chr11:48294800-48295200 Bivalent Enhancer ES-I3 Cell Line embryonic stem cell
18 chr11:48295000-48295200 Bivalent Enhancer ES-WA7 Cell Line embryonic stem cell
19 chr11:48314000-48314400 Active TSS ES-I3 Cell Line embryonic stem cell
20 chr11:48328000-48328400 Enhancers Lung lung
21 chr11:48329400-48329800 Enhancers Primary T helper 17 cells PMA-I stimulated --
22 chr11:48329400-48330000 Enhancers Primary T helper cells fromperipheralblood blood
23 chr11:48329600-48329800 Bivalent Enhancer Primary T helper cells PMA-I stimulated --
24 chr11:48329600-48329800 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
25 chr11:48329600-48329800 Enhancers Brain Angular Gyrus brain
26 chr11:48329600-48329800 Enhancers Brain Cingulate Gyrus brain
27 chr11:48329600-48329800 Enhancers Brain Hippocampus Middle brain
28 chr11:48336400-48337600 Enhancers Stomach Mucosa stomach
29 chr11:48337600-48341200 Weak transcription Stomach Mucosa stomach
30 chr11:48341200-48342600 Enhancers Stomach Mucosa stomach
31 chr11:48341400-48345800 ZNF genes & repeats HUES48 Cell Line embryonic stem cell
32 chr11:48341600-48341800 Bivalent Enhancer Left Ventricle heart
33 chr11:48341600-48342000 Bivalent Enhancer Right Atrium heart
34 chr11:48341600-48342000 Enhancers Spleen Spleen
35 chr11:48341800-48342000 Enhancers Left Ventricle heart
36 chr11:48342600-48344400 Weak transcription Stomach Mucosa stomach
37 chr11:48344400-48344800 Enhancers Stomach Mucosa stomach
38 chr11:48344800-48349800 Weak transcription Stomach Mucosa stomach
39 chr11:48346600-48346800 Enhancers Primary T helper memory cells from peripheral blood 2 blood
40 chr11:48346600-48347000 ZNF genes & repeats HUES64 Cell Line embryonic stem cell
41 chr11:48346600-48347400 Enhancers Primary Natural Killer cells fromperipheralblood blood
42 chr11:48346600-48348600 ZNF genes & repeats ES-UCSF4 Cell Line embryonic stem cell
43 chr11:48346800-48347400 ZNF genes & repeats H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
44 chr11:48348800-48350000 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
45 chr11:48350000-48355600 Weak transcription Stomach Mucosa stomach
46 chr11:48352400-48353400 ZNF genes & repeats HUES48 Cell Line embryonic stem cell
47 chr11:48352400-48353800 ZNF genes & repeats iPS-20b Cell Line embryonic stem cell
48 chr11:48353000-48359800 ZNF genes & repeats HUES64 Cell Line embryonic stem cell
49 chr11:48355200-48363800 ZNF genes & repeats ES-UCSF4 Cell Line embryonic stem cell
50 chr11:48355600-48357000 Enhancers Stomach Mucosa stomach

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