Variant report
Variant | nsv554401 |
---|---|
Chromosome Location | chr11:50121285-50766308 |
allele | n/a |
Outlinks | Ensembl   UCSC |
- TF binding region (count:2410)
- CpG islands (count:2384)
- Chromatin interactive region (count:5)
- LncRNA region (count:47)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No. | Transcrition factor | Chromosome Location | Cell Line | Cell type | Cell Stage | Matched TF binding sites |
---|---|---|---|---|---|---|
1 | ARID3A | chr11:50712564-50712666 | K562 | blood: | n/a | n/a |
2 | ATF1 | chr11:50757990-50758182 | K562 | blood: | n/a | n/a |
3 | ATF1 | chr11:50257555-50257921 | K562 | blood: | n/a | n/a |
4 | ATF1 | chr11:50721580-50721799 | K562 | blood: | n/a | n/a |
5 | ATF1 | chr11:50741510-50741536 | K562 | blood: | n/a | n/a |
6 | ATF1 | chr11:50381201-50381204 | K562 | blood: | n/a | n/a |
7 | ATF1 | chr11:50755176-50755720 | K562 | blood: | n/a | n/a |
8 | ATF1 | chr11:50409411-50409611 | K562 | blood: | n/a | n/a |
9 | ATF1 | chr11:50728352-50728528 | K562 | blood: | n/a | n/a |
10 | ATF1 | chr11:50676160-50676529 | K562 | blood: | n/a | n/a |
11 | ATF3 | chr11:50257564-50257818 | K562 | blood: | n/a | chr11:50257726-50257746 chr11:50257724-50257737 chr11:50257584-50257592 chr11:50257723-50257738 chr11:50257725-50257736 |
12 | BACH1 | chr11:50699638-50700011 | K562 | blood: | n/a | n/a |
13 | BACH1 | chr11:50739007-50739300 | K562 | blood: | n/a | n/a |
14 | BACH1 | chr11:50762679-50763056 | K562 | blood: | n/a | n/a |
15 | BACH1 | chr11:50744265-50744293 | K562 | blood: | n/a | n/a |
16 | BACH1 | chr11:50765324-50765524 | K562 | blood: | n/a | n/a |
17 | BACH1 | chr11:50759699-50760188 | K562 | blood: | n/a | n/a |
18 | BACH1 | chr11:50741715-50742187 | K562 | blood: | n/a | n/a |
19 | BATF | chr11:50764084-50764312 | GM12878 | blood: | n/a | n/a |
20 | BATF | chr11:50756360-50756521 | GM12878 | blood: | n/a | n/a |
21 | BATF | chr11:50723560-50724069 | GM12878 | blood: | n/a | n/a |
22 | BATF | chr11:50700733-50700935 | GM12878 | blood: | n/a | n/a |
23 | BATF | chr11:50687048-50687278 | GM12878 | blood: | n/a | n/a |
24 | BATF | chr11:50685636-50685821 | GM12878 | blood: | n/a | n/a |
25 | BATF | chr11:50688591-50688754 | GM12878 | blood: | n/a | n/a |
26 | BATF | chr11:50670735-50670974 | GM12878 | blood: | n/a | n/a |
27 | BATF | chr11:50711202-50711412 | GM12878 | blood: | n/a | n/a |
28 | BATF | chr11:50722179-50722655 | GM12878 | blood: | n/a | n/a |
29 | BATF | chr11:50251866-50252053 | GM12878 | blood: | n/a | n/a |
30 | BATF | chr11:50668601-50668765 | GM12878 | blood: | n/a | n/a |
31 | BATF | chr11:50711195-50711416 | GM12878 | blood: | n/a | n/a |
32 | BATF | chr11:50649412-50649706 | GM12878 | blood: | n/a | n/a |
33 | BATF | chr11:50756315-50756627 | GM12878 | blood: | n/a | n/a |
34 | BATF | chr11:50686999-50687394 | GM12878 | blood: | n/a | n/a |
35 | BATF | chr11:50764082-50764319 | GM12878 | blood: | n/a | n/a |
36 | BATF | chr11:50761809-50762209 | GM12878 | blood: | n/a | n/a |
37 | BATF | chr11:50742992-50743342 | GM12878 | blood: | n/a | n/a |
38 | BATF | chr11:50671779-50671988 | GM12878 | blood: | n/a | n/a |
39 | BATF | chr11:50681509-50681669 | GM12878 | blood: | n/a | n/a |
40 | BATF | chr11:50670092-50670325 | GM12878 | blood: | n/a | n/a |
41 | BATF | chr11:50755495-50755763 | GM12878 | blood: | n/a | n/a |
42 | BATF | chr11:50721484-50721792 | GM12878 | blood: | n/a | n/a |
43 | BATF | chr11:50757466-50757719 | GM12878 | blood: | n/a | n/a |
44 | BATF | chr11:50749839-50750367 | GM12878 | blood: | n/a | n/a |
45 | BATF | chr11:50676256-50676541 | GM12878 | blood: | n/a | n/a |
46 | BATF | chr11:50676209-50676542 | GM12878 | blood: | n/a | n/a |
47 | BCL11A | chr11:50761565-50762209 | GM12878 | blood: | n/a | n/a |
48 | BCL11A | chr11:50763737-50764382 | GM12878 | blood: | n/a | n/a |
49 | BCL11A | chr11:50749864-50750376 | GM12878 | blood: | n/a | n/a |
50 | BCL11A | chr11:50756362-50756573 | GM12878 | blood: | n/a | n/a |
No. | Chromosome Location | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr11:50257771-50257821 | NT2-D1 | testis: | n/a |
2 | chr11:50260762-50260812 | GM12891 | blood: | n/a |
3 | chr11:50257256-50257306 | HIPEpiC | eye: | n/a |
4 | chr11:50219952-50220002 | SK-N-SH_RA | brain: | n/a |
5 | chr11:50226789-50226839 | CMK | blood: | n/a |
6 | chr11:50257771-50257821 | NT2-D1 | testis: | n/a |
7 | chr11:50260762-50260812 | GM12891 | blood: | n/a |
8 | chr11:50257256-50257306 | HIPEpiC | eye: | n/a |
9 | chr11:50219952-50220002 | SK-N-SH_RA | brain: | n/a |
10 | chr11:50226789-50226839 | CMK | blood: | n/a |
11 | chr11:50256574-50256624 | PANC-1 | pancreas: | n/a |
12 | chr11:50257496-50257546 | HepG2 | liver: | n/a |
13 | chr11:50220107-50220157 | AG09319 | gingival: | n/a |
14 | chr11:50238009-50238059 | Hela-S3 | cervix: | n/a |
15 | chr11:50206561-50206611 | PFSK-1 | brain: | n/a |
16 | chr11:50260762-50260812 | HRPEpiC | eye: | n/a |
17 | chr11:50257771-50257821 | HPAEpiC | pulmonary alveolar: | n/a |
18 | chr11:50206530-50206580 | GM12891 | blood: | n/a |
19 | chr11:50254503-50254553 | HNPCEpiC | eye: | n/a |
20 | chr11:50227476-50227526 | ECC-1 | luminal epithelium: | n/a |
21 | chr11:50257633-50257683 | AoSMC | blood vessel: | n/a |
22 | chr11:50220343-50220393 | AG04450 | lung: | fetal |
23 | chr11:50220389-50220439 | GM19239 | blood: | n/a |
24 | chr11:50254503-50254553 | NHBE | bronchial: | n/a |
25 | chr11:50256574-50256624 | LNCaP | prostate: | n/a |
26 | chr11:50256574-50256624 | HNPCEpiC | eye: | n/a |
27 | chr11:50206606-50206656 | K562 | blood: | n/a |
28 | chr11:50260762-50260812 | NH-A | brain: | n/a |
29 | chr11:50238009-50238059 | CMK | blood: | n/a |
30 | chr11:50206561-50206611 | Jurkat | blood: | n/a |
31 | chr11:50371681-50371731 | HNPCEpiC | eye: | n/a |
32 | chr11:50227199-50227249 | AoSMC | blood vessel: | n/a |
33 | chr11:50227476-50227526 | HepG2 | liver: | n/a |
34 | chr11:50227265-50227315 | IMR90 | lung: | fetal |
35 | chr11:50257256-50257306 | NH-A | brain: | n/a |
36 | chr11:50219952-50220002 | HEEpiC | esophagus: | n/a |
37 | chr11:50257256-50257306 | PFSK-1 | brain: | n/a |
38 | chr11:50206561-50206611 | HCF | heart: | n/a |
39 | chr11:50220107-50220157 | SAEC | small airway: | n/a |
40 | chr11:50257771-50257821 | AG09309 | skin: | n/a |
41 | chr11:50254503-50254553 | PANC-1 | pancreas: | n/a |
42 | chr11:50257633-50257683 | GM12891 | blood: | n/a |
43 | chr11:50257752-50257802 | GM12891 | blood: | n/a |
44 | chr11:50129456-50129506 | AG09319 | gingival: | n/a |
45 | chr11:50258750-50258800 | GM19239 | blood: | n/a |
46 | chr11:50220426-50220476 | GM19239 | blood: | n/a |
47 | chr11:50220055-50220105 | SKMC | muscle: | n/a |
48 | chr11:50206530-50206580 | MCF10A-Er-Src | breast: | n/a |
49 | chr11:50258273-50258323 | HL-60 | blood: | n/a |
50 | chr11:50257633-50257683 | ovcar-3 | ovarian: | n/a |
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No. | Distal block | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr11:50670378..50671219-chr4:101762576..101763076,2 | MCF-7 | breast: | |
2 | chr11:50172306..50174473-chr11:50176469..50178865,2 | K562 | blood: | |
3 | chr11:50256839..50259422-chr11:50261676..50263683,2 | K562 | blood: | |
4 | chr11:50731452..50731974-chr8:46856234..46856754,2 | MCF-7 | breast: | |
5 | chr11:50172306..50174473-chr11:50176469..50178865,2 | K562 | blood: |
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No. | lncRNA name | Chromosome Location | lncRNA alias |
---|---|---|---|
1 | lnc-OR4C12-1 | chr11:50231598-50231759 | XLOC_009440 |
2 | lnc-OR4C13-7 | chr11:50280085-50280169 | NONHSAT021340 |
3 | lnc-OR4C13-7 | chr11:50274586-50274767 | NONHSAT021340 |
4 | lnc-OR4C13-1 | chr11:50257750-50258088 | ENSG00000254518 |
5 | lnc-OR4C13-9 | chr11:50375274-50375391 | NR_024504 |
6 | lnc-OR4C13-9 | chr11:50368318-50368359 | NR_024504 |
7 | lnc-OR4C13-7 | chr11:50274586-50274778 | NONHSAT021338 |
8 | lnc-OR4C13-9 | chr11:50375235-50375391 | NONHSAT021344 |
9 | lnc-OR4C13-7 | chr11:50301079-50301142 | NONHSAT021343 |
10 | lnc-OR4C13-7 | chr11:50302810-50303035 | NONHSAT021343 |
11 | lnc-OR4C13-7 | chr11:50320710-50320877 | NONHSAT021340 |
12 | lnc-OR4C13-1 | chr11:50262310-50262433 | NONHSAT021336 |
13 | lnc-OR4C13-7 | chr11:50279538-50279677 | NONHSAT021339 |
14 | lnc-OR4C13-9 | chr11:50368739-50368821 | NR_024504 |
15 | lnc-OR4C13-7 | chr11:50320143-50320239 | NONHSAT021340 |
16 | lnc-OR4C13-1 | chr11:50261115-50261299 | NONHSAT021336 |
17 | lnc-OR4C13-1 | chr11:50261115-50261299 | ENSG00000254518 |
18 | lnc-OR4C13-7 | chr11:50266792-50266965 | NONHSAT021338 |
19 | lnc-OR4C13-7 | chr11:50302810-50302996 | NONHSAT021339 |
20 | lnc-OR4C13-9 | chr11:50368318-50368359 | NONHSAT021344 |
21 | lnc-OR4C13-9 | chr11:50379313-50379548 | NR_024504 |
22 | lnc-OR4C13-7 | chr11:50280085-50280169 | NONHSAT021339 |
23 | lnc-OR4C13-1 | chr11:50257750-50258210 | NONHSAT021336 |
24 | lnc-OR4C12-1 | chr11:50232840-50233106 | XLOC_009440 |
25 | lnc-OR4C13-7 | chr11:50266852-50266898 | NONHSAT021340 |
26 | lnc-OR4C13-7 | chr11:50302810-50303098 | NONHSAT021342 |
27 | lnc-OR4C13-9 | chr11:50379775-50379803 | NONHSAT021345 |
28 | lnc-OR4C13-1 | chr11:50263752-50263827 | ENSG00000254518 |
29 | lnc-OR4C13-9 | chr11:50379775-50379802 | NR_024504 |
30 | lnc-OR4C13-9 | chr11:50375235-50375391 | NONHSAT021345 |
31 | lnc-OR4C13-9 | chr11:50376439-50376850 | NONHSAT021345 |
32 | lnc-OR4C13-7 | chr11:50266792-50266898 | NONHSAT021339 |
33 | lnc-OR4C13-7 | chr11:50313156-50313246 | NONHSAT021340 |
34 | lnc-OR4C13-1 | chr11:50262310-50262433 | ENSG00000254518 |
35 | lnc-OR4C13-7 | chr11:50279538-50279677 | NONHSAT021340 |
36 | lnc-OR4C13-1 | chr11:50263752-50263827 | NONHSAT021336 |
37 | lnc-OR4C13-1 | chr11:50257789-50258088 | ENSG00000254518 |
38 | lnc-OR4C13-7 | chr11:50274586-50274767 | NONHSAT021339 |
39 | lnc-OR4C13-7 | chr11:50301870-50302020 | NONHSAT021343 |
40 | lnc-OR4C13-9 | chr11:50379313-50379802 | NONHSAT021344 |
41 | lnc-OR4C13-9 | chr11:50378065-50378165 | NR_024504 |
42 | lnc-OR4C13-7 | chr11:50279839-50280169 | NONHSAT021342 |
43 | lnc-OR4C13-9 | chr11:50379313-50379548 | NONHSAT021345 |
44 | lnc-OR4C13-9 | chr11:50376439-50376850 | NONHSAT021344 |
45 | lnc-OR4C13-9 | chr11:50378065-50378165 | NONHSAT021345 |
46 | lnc-OR4C13-9 | chr11:50368739-50368821 | NONHSAT021344 |
47 | lnc-OR4C13-9 | chr11:50378065-50378165 | NONHSAT021344 |
No data |
No data |
Variant related genes | Relation type |
---|---|
ENSG00000255500 | TF binding region |
ENSG00000254840 | TF binding region |
ENSG00000255001 | TF binding region |
ENSG00000236919 | TF binding region |
ENSG00000255442 | TF binding region |
ENSG00000254518 | TF binding region |
ENSG00000255042 | TF binding region |
ENSG00000214883 | TF binding region |
ENSG00000255500 | CpG island |
ENSG00000254840 | CpG island |
ENSG00000255001 | CpG island |
ENSG00000236919 | CpG island |
ENSG00000255442 | CpG island |
ENSG00000254518 | CpG island |
ENSG00000255042 | CpG island |
ENSG00000214883 | CpG island |
ENSG00000254518 | chromatin interactions |
No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | rs374403775 | chr11:50124781-50124782 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
2 | rs567323457 | chr11:50124790-50124791 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
3 | rs536453141 | chr11:50124796-50124797 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
4 | rs368514516 | chr11:50124797-50124798 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
5 | rs116327800 | chr11:50124810-50124811 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
6 | rs143694102 | chr11:50124857-50124858 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
7 | rs189956986 | chr11:50124869-50124870 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
8 | rs114926767 | chr11:50129008-50129009 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
9 | rs529494050 | chr11:50129012-50129013 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
10 | rs11245894 | chr11:50129033-50129034 | ZNF genes & repeats | n/a | n/a | LD-proxies of rSNPOverlapped rCNV | n/a |
11 | rs559412557 | chr11:50129040-50129041 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
12 | rs186011377 | chr11:50129060-50129061 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
13 | rs145508901 | chr11:50129093-50129094 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
14 | rs568551621 | chr11:50129112-50129113 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
15 | rs534007787 | chr11:50129130-50129131 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
16 | rs113682456 | chr11:50129175-50129176 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
17 | rs537265728 | chr11:50129188-50129189 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
18 | rs550584042 | chr11:50129203-50129204 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
19 | rs145257215 | chr11:50129217-50129218 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
20 | rs373378117 | chr11:50129241-50129242 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
21 | rs567591849 | chr11:50129257-50129258 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
22 | rs536248113 | chr11:50129260-50129261 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
23 | rs1995041 | chr11:50129261-50129262 | ZNF genes & repeats | n/a | n/a | LD-proxies of rSNPOverlapped rCNV | n/a |
24 | rs138031910 | chr11:50129277-50129278 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
25 | rs538711537 | chr11:50129324-50129325 | ZNF genes & repeats | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
26 | rs16926834 | chr11:50129325-50129326 | ZNF genes & repeats | TF binding region | 1 gene(s) | LD-proxies of rSNPOverlapped rCNV | n/a |
27 | rs189574434 | chr11:50129388-50129389 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
28 | rs544023501 | chr11:50129408-50129409 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
29 | rs563825954 | chr11:50129413-50129414 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
30 | rs180808185 | chr11:50129454-50129455 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
31 | rs542923637 | chr11:50129456-50129457 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
32 | rs577343319 | chr11:50129483-50129484 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
33 | rs559275696 | chr11:50129500-50129501 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
34 | rs570499675 | chr11:50129510-50129511 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
35 | rs150562363 | chr11:50129513-50129514 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
36 | rs546207068 | chr11:50129522-50129523 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
37 | rs372348367 | chr11:50129543-50129544 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
38 | rs186728827 | chr11:50129553-50129554 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
39 | rs530595719 | chr11:50129561-50129562 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
40 | rs7104653 | chr11:50129598-50129599 | ZNF genes & repeats | n/a | n/a | LD-proxies of rSNPOverlapped rCNV | n/a |
41 | rs567555810 | chr11:50129633-50129634 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
42 | rs58677382 | chr11:50129655-50129656 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
43 | rs546940267 | chr11:50129664-50129665 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
44 | rs566444260 | chr11:50129673-50129674 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
45 | rs538664134 | chr11:50129689-50129690 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
46 | rs58447209 | chr11:50129708-50129709 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
47 | rs149267806 | chr11:50129718-50129719 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
48 | rs368235824 | chr11:50129723-50129724 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
49 | rs557093030 | chr11:50129746-50129747 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
50 | rs573899800 | chr11:50129751-50129752 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
Disease | PMID | Source |
---|---|---|
Chordoma | 21602918 | CNVD |
Breast cancer | 21949216 | CNVD |
Cancer | 21637783 | CNVD |
Non-syndromic sensorineural hearing loss | 19222835 | CNVD |
T-cell acute lymphoblastic leukemia | 20065082 | CNVD |
Ewing''s sarcoma | 21437220 | CNVD |
Glioblastoma multiforme | 21080181 | CNVD |
Endometrial cancer | 22040021 | CNVD |
Astrocytoma | 17387387 | CNVD |
Breast cancer | 21264507 | CNVD |
Beckwith-Wiedemann syndrome | 21518781 | CNVD |
Wilms tumour | 21518781 | CNVD |
Hepatoblastoma | 21518781 | CNVD |
Acute lymphoblastic leukemia | 20067559 | CNVD |
Gastrointestinal stromal cancer | 17535989 | CNVD |
Paraganglioma | 17535989 | CNVD |
Pulmonary chondroma | 17535989 | CNVD |
Wilms tumour | 21544195 | CNVD |
Medulloblastoma | 21979893 | CNVD |
Gastric cancer | 17908304 | CNVD |
Multiple myeloma | 20724749 | CNVD |
Acute lymphoblastic leukemia | 20435627 | CNVD |
Autism | 22495311 | CNVD |
Chronic lymphocytic leukemia | 21546498 | CNVD |
Non-small cell lung cancer | 21385341 | CNVD |
Intellectual disability | 22102821 | CNVD |
Renal cell carcinoma | 18194544 | CNVD |
T-cell prolymphocytic leukemia | 19278963 | CNVD |
Potocki-Shaffer syndrome | 19222835 | CNVD |
WAGR syndrome | 19222835 | CNVD |
Lung cancer | 18438408 | CNVD |
Breast cancer | 16608533 | CNVD |
Hirschsprung''s Disease | 21712996 | CNVD |
Follicular lymphoma | 20505157 | CNVD |
Colorectal cancer | 21128281 | CNVD |
Glioblastoma multiforme | 21138945 | CNVD |
Breast cancer | 21364760 | CNVD |
Prostate cancer | 18632612 | CNVD |
Breast cancer | 21990379 | CNVD |
Myelofibrosis | 22110671 | CNVD |
Intellectual disability | 22045946 | CNVD |
small cell lung cancer | 20016488 | CNVD |
Schizophrenia | 23813976 | CNVD |
Non-syndromic sensorineural hearing loss | 17122850 | CNVD |
Mortal | 21835882 | CNVD |
Autism | 22495309 | CNVD |
Melanoma | 20877625 | CNVD |
Ovarian cancer | 21781307 | CNVD |
Breast cancer | 22522925 | CNVD |
Breast cancer | 21785460 | CNVD |
Non-syndromic sensorineural hearing loss | 21293372 | CNVD |
Esophageal cancer | 21851588 | CNVD |
Acute myeloid leukemia | 20729466 | CNVD |
Breast cancer | 17142309 | CNVD |
Bipolar disorder | 19214233 | CNVD |
Medulloblastoma | 21163964 | CNVD |
early-passage human iPS cells | 21368824 | CNVD |
Bipolar disorder | 19114987 | CNVD |
Non-syndromic sensorineural hearing loss | 22037309 | CNVD |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr11:50129000-50130400 | ZNF genes & repeats | Placenta | Placenta |
2 | chr11:50129400-50129800 | ZNF genes & repeats | iPS DF 19.11 Cell Line | embryonic stem cell |
3 | chr11:50130400-50131000 | Active TSS | Placenta | Placenta |
4 | chr11:50133000-50133200 | Enhancers | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
5 | chr11:50133000-50133800 | Enhancers | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
6 | chr11:50133200-50133600 | Active TSS | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
7 | chr11:50133200-50134200 | Flanking Active TSS | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
8 | chr11:50133200-50134400 | Enhancers | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
9 | chr11:50133200-50134400 | Enhancers | Adipose Nuclei | Adipose |
10 | chr11:50133600-50133800 | Enhancers | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
11 | chr11:50133800-50134000 | Flanking Active TSS | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
12 | chr11:50133800-50134000 | Flanking Active TSS | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
13 | chr11:50134000-50134400 | Enhancers | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
14 | chr11:50134000-50135000 | Enhancers | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
15 | chr11:50134200-50134400 | Enhancers | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
16 | chr11:50134400-50140400 | Weak transcription | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
17 | chr11:50134400-50146200 | Weak transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
18 | chr11:50136600-50136800 | ZNF genes & repeats | HUES64 Cell Line | embryonic stem cell |
19 | chr11:50140400-50142200 | Enhancers | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
20 | chr11:50140400-50142600 | Enhancers | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
21 | chr11:50141800-50142000 | Weak transcription | Adipose Nuclei | Adipose |
22 | chr11:50142000-50142200 | Enhancers | Adipose Nuclei | Adipose |
23 | chr11:50142200-50144600 | Weak transcription | Adipose Nuclei | Adipose |
24 | chr11:50142200-50145600 | Weak transcription | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
25 | chr11:50142600-50147000 | Weak transcription | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
26 | chr11:50144600-50147200 | Enhancers | Adipose Nuclei | Adipose |
27 | chr11:50145600-50146000 | Enhancers | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
28 | chr11:50145800-50147400 | Enhancers | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
29 | chr11:50146000-50147000 | Weak transcription | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
30 | chr11:50146200-50147400 | Enhancers | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
31 | chr11:50147000-50147400 | Enhancers | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
32 | chr11:50147000-50147600 | Enhancers | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
33 | chr11:50151800-50152200 | ZNF genes & repeats | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
34 | chr11:50155000-50155200 | Active TSS | HMEC | breast |
35 | chr11:50155000-50155200 | Enhancers | HSMMtube | muscle |
36 | chr11:50155000-50155200 | Enhancers | NH-A | brain |
37 | chr11:50188200-50189000 | Enhancers | Adipose Nuclei | Adipose |
38 | chr11:50191600-50191800 | ZNF genes & repeats | Right Atrium | heart |
39 | chr11:50191800-50194400 | Weak transcription | Right Atrium | heart |
40 | chr11:50192600-50195800 | ZNF genes & repeats | HUES64 Cell Line | embryonic stem cell |
41 | chr11:50193600-50193800 | ZNF genes & repeats | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
42 | chr11:50202200-50204200 | Weak transcription | Pancreatic Islets | Pancreatic Islet |
43 | chr11:50206200-50207200 | ZNF genes & repeats | iPS DF 19.11 Cell Line | embryonic stem cell |
44 | chr11:50217000-50218200 | ZNF genes & repeats | iPS-20b Cell Line | embryonic stem cell |
45 | chr11:50220000-50220800 | ZNF genes & repeats | iPS DF 19.11 Cell Line | embryonic stem cell |
46 | chr11:50220600-50221200 | ZNF genes & repeats | iPS-20b Cell Line | embryonic stem cell |
47 | chr11:50238000-50238400 | ZNF genes & repeats | Esophagus | oesophagus |
48 | chr11:50242200-50242400 | ZNF genes & repeats | Placenta | Placenta |
49 | chr11:50242400-50246200 | Weak transcription | Placenta | Placenta |
50 | chr11:50246400-50256200 | Weak transcription | Placenta | Placenta |