Variant report

Variant nsv554404
Chromosome Location chr11:50238212-50378965
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:68 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:50238000-50238400 ZNF genes & repeats Esophagus oesophagus
2 chr11:50242200-50242400 ZNF genes & repeats Placenta Placenta
3 chr11:50242400-50246200 Weak transcription Placenta Placenta
4 chr11:50246400-50256200 Weak transcription Placenta Placenta
5 chr11:50250800-50256200 Weak transcription K562 blood
6 chr11:50256200-50256400 Enhancers Placenta Placenta
7 chr11:50256200-50258600 Active TSS K562 blood
8 chr11:50256400-50256800 Flanking Active TSS Placenta Placenta
9 chr11:50256800-50257200 Active TSS Placenta Placenta
10 chr11:50257000-50258200 ZNF genes & repeats Fetal Adrenal Gland Adrenal Gland
11 chr11:50257200-50257400 Flanking Active TSS Placenta Placenta
12 chr11:50257200-50257600 Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
13 chr11:50257200-50257600 Active TSS H9 Derived Neuron Cultured Cells ES cell derived
14 chr11:50257200-50257600 Active TSS Primary T cells fromperipheralblood blood
15 chr11:50257200-50257600 Active TSS Primary T regulatory cells fromperipheralblood blood
16 chr11:50257200-50257600 Active TSS Brain Cingulate Gyrus brain
17 chr11:50257200-50257600 ZNF genes & repeats Fetal Intestine Small intestine
18 chr11:50257200-50257600 ZNF genes & repeats Fetal Stomach stomach
19 chr11:50257200-50257600 Active TSS Ovary ovary
20 chr11:50257200-50257600 Active TSS Psoas Muscle Psoas
21 chr11:50257200-50257600 Active TSS Right Atrium heart
22 chr11:50257200-50257600 Active TSS Right Ventricle heart
23 chr11:50257200-50257600 Active TSS Skeletal Muscle Female skeletal muscle
24 chr11:50257200-50257600 Active TSS Stomach Smooth Muscle stomach
25 chr11:50257200-50257600 Active TSS HSMM muscle
26 chr11:50257200-50258000 ZNF genes & repeats iPS DF 19.11 Cell Line embryonic stem cell
27 chr11:50257200-50258000 ZNF genes & repeats Gastric stomach
28 chr11:50257200-50258000 ZNF genes & repeats Pancreas Pancrea
29 chr11:50257200-50258200 ZNF genes & repeats H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
30 chr11:50257400-50258000 Active TSS Fetal Lung lung
31 chr11:50257400-50258800 ZNF genes & repeats Placenta Placenta
32 chr11:50258000-50260600 Weak transcription Gastric stomach
33 chr11:50258800-50274600 Weak transcription Placenta Placenta
34 chr11:50260600-50260800 ZNF genes & repeats Gastric stomach
35 chr11:50274600-50275400 Strong transcription Placenta Placenta
36 chr11:50275400-50277000 Weak transcription Placenta Placenta
37 chr11:50295800-50296200 Enhancers Adipose Nuclei Adipose
38 chr11:50324400-50325400 ZNF genes & repeats HUES48 Cell Line embryonic stem cell
39 chr11:50326400-50345800 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
40 chr11:50326600-50328800 ZNF genes & repeats Liver Liver
41 chr11:50330000-50331600 ZNF genes & repeats Liver Liver
42 chr11:50337400-50343400 ZNF genes & repeats Liver Liver
43 chr11:50337600-50341800 ZNF genes & repeats Duodenum Smooth Muscle Duodenum
44 chr11:50340600-50341400 ZNF genes & repeats Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
45 chr11:50341600-50345800 ZNF genes & repeats HUES48 Cell Line embryonic stem cell
46 chr11:50342800-50343200 Active TSS Right Atrium heart
47 chr11:50344800-50345600 Active TSS Fetal Heart heart
48 chr11:50345400-50345600 ZNF genes & repeats ES-UCSF4 Cell Line embryonic stem cell
49 chr11:50345800-50346800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
50 chr11:50346600-50347000 ZNF genes & repeats HUES48 Cell Line embryonic stem cell

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