Variant report

Variant	nsv555639
Chromosome Location	chr11:85436352-85495269
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:466)
CpG islands
(count:977)
Chromatin interactive
region (count:107)
LncRNA
region (count:3)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:466 , 50 per page) page: 1 2 3 4 5 6 7 ... 10

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ATF1	chr11:85437160-85437164	K562	blood:	n/a	n/a
2	ATF3	chr11:85437022-85437235	K562	blood:	n/a	n/a
3	ATF3	chr11:85459311-85459985	A549	lung:	n/a	n/a
4	BCL3	chr11:85459306-85460048	A549	lung:	n/a	n/a
5	CBX3	chr11:85436418-85437521	HCT-116	colon:	n/a	n/a
6	CBX3	chr11:85436571-85437484	HCT-116	colon:	n/a	n/a
7	CEBPB	chr11:85492593-85493103	MCF-7	breast:	n/a	n/a
8	CEBPB	chr11:85436811-85437316	HCT-116	colon:	n/a	n/a
9	CEBPB	chr11:85470887-85471251	MCF-7	breast:	n/a	n/a
10	CEBPB	chr11:85460646-85460756	HepG2	liver:	n/a	n/a
11	CEBPB	chr11:85460565-85460818	A549	lung:	n/a	n/a
12	CEBPB	chr11:85492761-85492997	K562	blood:	n/a	n/a
13	CEBPB	chr11:85492692-85493053	A549	lung:	n/a	n/a
14	CEBPB	chr11:85454000-85454341	Hela-S3	cervix:	n/a	n/a
15	CEBPB	chr11:85470939-85471214	ECC-1	luminal epithelium:	n/a	n/a
16	CEBPB	chr11:85470950-85471431	A549	lung:	n/a	n/a
17	CEBPB	chr11:85470952-85471285	H1-hESC	embryonic stem cell:	n/a	n/a
18	CEBPB	chr11:85451606-85451830	Hela-S3	cervix:	n/a	n/a
19	CEBPB	chr11:85491164-85491483	HepG2	liver:	n/a	chr11:85491312-85491323
20	CEBPB	chr11:85450526-85450834	A549	lung:	n/a	chr11:85450662-85450673 chr11:85450663-85450674
21	CEBPB	chr11:85492628-85493199	A549	lung:	n/a	n/a
22	CEBPB	chr11:85492700-85493030	K562	blood:	n/a	n/a
23	CEBPB	chr11:85450575-85450778	K562	blood:	n/a	chr11:85450662-85450673 chr11:85450663-85450674
24	CEBPB	chr11:85490996-85491492	A549	lung:	n/a	chr11:85491312-85491323
25	CEBPB	chr11:85492667-85493130	A549	lung:	n/a	n/a
26	CEBPB	chr11:85492705-85493051	H1-hESC	embryonic stem cell:	n/a	n/a
27	CEBPB	chr11:85492671-85493075	Hela-S3	cervix:	n/a	n/a
28	CEBPB	chr11:85492696-85492975	ECC-1	luminal epithelium:	n/a	n/a
29	CEBPB	chr11:85487578-85487817	IMR90	lung:	n/a	n/a
30	CEBPB	chr11:85469749-85469863	A549	lung:	n/a	chr11:85469817-85469826
31	CEBPB	chr11:85461891-85462184	IMR90	lung:	n/a	n/a
32	CEBPB	chr11:85492809-85492908	HepG2	liver:	n/a	n/a
33	CEBPB	chr11:85459303-85459997	A549	lung:	n/a	n/a
34	CEBPB	chr11:85470917-85471335	IMR90	lung:	n/a	n/a
35	CEBPB	chr11:85492714-85492990	ECC-1	luminal epithelium:	n/a	n/a
36	CEBPB	chr11:85450545-85450852	Hela-S3	cervix:	n/a	chr11:85450662-85450673 chr11:85450663-85450674
37	CEBPB	chr11:85470816-85471428	HCT-116	colon:	n/a	n/a
38	CEBPB	chr11:85453740-85454559	HCT-116	colon:	n/a	n/a
39	CEBPB	chr11:85470922-85471280	Hela-S3	cervix:	n/a	n/a
40	CEBPB	chr11:85492614-85493148	MCF-7	breast:	n/a	n/a
41	CEBPB	chr11:85470946-85471251	A549	lung:	n/a	n/a
42	CEBPB	chr11:85436706-85437444	HCT-116	colon:	n/a	n/a
43	CEBPB	chr11:85491260-85491460	Hela-S3	cervix:	n/a	chr11:85491312-85491323
44	CEBPB	chr11:85491001-85491592	A549	lung:	n/a	chr11:85491312-85491323
45	CEBPB	chr11:85490895-85491498	IMR90	lung:	n/a	chr11:85491312-85491323
46	CEBPB	chr11:85492702-85493051	HepG2	liver:	n/a	n/a
47	CEBPB	chr11:85457839-85458035	Hela-S3	cervix:	n/a	n/a
48	CEBPB	chr11:85436954-85437343	Hela-S3	cervix:	n/a	n/a
49	CEBPB	chr11:85492613-85493012	HCT-116	colon:	n/a	n/a
50	CEBPB	chr11:85450530-85450847	HepG2	liver:	n/a	chr11:85450662-85450673 chr11:85450663-85450674

(count:977 , 50 per page) page: 1 2 3 4 5 6 7 ... 20

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr11:85469919-85469969	HRCEpiC	kidney:	n/a
2	chr11:85469919-85469969	HRCEpiC	kidney:	n/a
3	chr11:85484509-85484559	MCF-7	breast:	n/a
4	chr11:85451557-85451607	HepG2	liver:	n/a
5	chr11:85437589-85437639	GM12878	blood:	n/a
6	chr11:85470458-85470508	Hela-S3	cervix:	n/a
7	chr11:85469037-85469087	LNCaP	prostate:	n/a
8	chr11:85437589-85437639	SK-N-SH_RA	brain:	n/a
9	chr11:85469919-85469969	U87	brain:	n/a
10	chr11:85438818-85438868	ProgFib	skin:	n/a
11	chr11:85469919-85469969	Hela-S3	cervix:	n/a
12	chr11:85438947-85438997	A549	lung:	n/a
13	chr11:85469117-85469167	GM12891	blood:	n/a
14	chr11:85438947-85438997	MCF-7	breast:	n/a
15	chr11:85451557-85451607	HEK293	kidney:	embryo
16	chr11:85491089-85491139	IMR90	lung:	fetal
17	chr11:85484509-85484559	LNCaP	prostate:	n/a
18	chr11:85469117-85469167	Hela-S3	cervix:	n/a
19	chr11:85437579-85437629	T-47D	breast:	n/a
20	chr11:85472846-85472896	AG09319	gingival:	n/a
21	chr11:85451557-85451607	ECC-1	luminal epithelium:	n/a
22	chr11:85491089-85491139	K562	blood:	n/a
23	chr11:85469919-85469969	ProgFib	skin:	n/a
24	chr11:85469919-85469969	A549	lung:	n/a
25	chr11:85469037-85469087	AG10803	skin:	n/a
26	chr11:85438947-85438997	HRE	kidney:	n/a
27	chr11:85437589-85437639	NB4	blood:	n/a
28	chr11:85469247-85469297	LNCaP	prostate:	n/a
29	chr11:85491089-85491139	Hepatocyte	liver:	n/a
30	chr11:85438773-85438823	MCF10A-Er-Src	breast:	n/a
31	chr11:85484509-85484559	AG04450	lung:	fetal
32	chr11:85437579-85437629	NH-A	brain:	n/a
33	chr11:85491089-85491139	Caco-2	colon:	n/a
34	chr11:85469117-85469167	HEEpiC	esophagus:	n/a
35	chr11:85438773-85438823	H1-hESC	embryonic stem cell:	embryo
36	chr11:85438818-85438868	NT2-D1	testis:	n/a
37	chr11:85469117-85469167	AG09309	skin:	n/a
38	chr11:85438947-85438997	NB4	blood:	n/a
39	chr11:85484509-85484559	HRCEpiC	kidney:	n/a
40	chr11:85470458-85470508	HEK293	kidney:	embryo
41	chr11:85437579-85437629	MCF10A-Er-Src	breast:	n/a
42	chr11:85472846-85472896	HRCEpiC	kidney:	n/a
43	chr11:85438947-85438997	RPTEC	kidney:	n/a
44	chr11:85437589-85437639	HNPCEpiC	eye:	n/a
45	chr11:85469117-85469167	AG09319	gingival:	n/a
46	chr11:85469919-85469969	MCF-7	breast:	n/a
47	chr11:85438773-85438823	ECC-1	luminal epithelium:	n/a
48	chr11:85470458-85470508	NT2-D1	testis:	n/a
49	chr11:85469037-85469087	HRCEpiC	kidney:	n/a
50	chr11:85451557-85451607	HEEpiC	esophagus:	n/a

(count:107 , 50 per page) page: 1 2 3

No.	Distal block	Cell Line	Cell type
1	chr11:85484461..85487220-chr11:85491729..85494428,2	MCF-7	breast:
2	chr11:85483031..85484829-chr11:85489354..85491386,2	MCF-7	breast:
3	chr11:85463747..85466661-chr11:85473937..85475998,2	MCF-7	breast:
4	chr11:85432781..85434564-chr11:85442681..85445528,2	MCF-7	breast:
5	chr11:85460961..85463869-chr11:85465217..85468287,3	MCF-7	breast:
6	chr11:85476838..85478489-chr11:85489449..85492312,2	MCF-7	breast:
7	chr11:85456348..85458453-chr11:85459854..85462602,2	K562	blood:
8	chr11:85470667..85472897-chr11:85479422..85481165,2	K562	blood:
9	chr11:85467154..85470617-chr11:85475521..85479674,4	MCF-7	breast:
10	chr11:85459682..85462503-chr11:85466829..85468700,3	MCF-7	breast:
11	chr11:85374169..85377247-chr11:85434867..85438072,3	MCF-7	breast:
12	chr11:85373496..85375971-chr11:85442950..85444857,2	MCF-7	breast:
13	chr11:85434348..85438681-chr11:85520824..85523815,4	MCF-7	breast:
14	chr11:85494490..85496333-chr11:85515737..85519342,3	MCF-7	breast:
15	chr11:85479990..85482394-chr11:85489064..85491141,2	MCF-7	breast:
16	chr11:85452078..85454739-chr11:85520232..85522927,2	MCF-7	breast:
17	chr11:85453893..85455528-chr11:85457587..85459184,2	MCF-7	breast:
18	chr11:85438614..85440584-chr11:85468892..85470720,2	MCF-7	breast:
19	chr11:85469322..85470979-chr11:85520431..85523173,2	MCF-7	breast:
20	chr11:85445751..85448371-chr11:85941133..85943891,2	MCF-7	breast:
21	chr11:85434439..85436977-chr11:85459317..85462236,2	MCF-7	breast:
22	chr11:85457955..85460944-chr11:85541331..85543778,2	MCF-7	breast:
23	chr11:85435149..85436971-chr11:85444294..85447151,2	MCF-7	breast:
24	chr11:85453675..85456598-chr11:85463651..85465546,2	MCF-7	breast:
25	chr11:85471592..85474349-chr11:85479281..85481547,2	MCF-7	breast:
26	chr11:85374448..85377150-chr11:85472660..85474200,2	MCF-7	breast:
27	chr11:85466013..85467547-chr11:85470379..85472711,2	MCF-7	breast:
28	chr11:85447296..85450521-chr11:85450822..85453106,4	MCF-7	breast:
29	chr11:85471983..85474269-chr11:85484169..85487158,2	MCF-7	breast:
30	chr11:85438614..85440584-chr11:85468892..85470720,2	MCF-7	breast:
31	chr11:85484288..85486316-chr11:85486416..85488624,2	MCF-7	breast:
32	chr11:85446637..85448828-chr11:85475522..85477132,2	MCF-7	breast:
33	chr11:85451589..85453294-chr11:85503015..85505521,2	MCF-7	breast:
34	chr11:85453893..85455528-chr11:85457587..85459184,2	MCF-7	breast:
35	chr11:85460295..85462125-chr11:85496572..85498601,2	MCF-7	breast:
36	chr11:85466239..85468587-chr11:85472162..85474352,2	MCF-7	breast:
37	chr11:85445028..85447969-chr11:85452486..85454600,2	K562	blood:
38	chr11:85456882..85459698-chr17:57916750..57918708,2	MCF-7	breast:
39	chr11:85449712..85452124-chr11:85536910..85538885,2	MCF-7	breast:
40	chr11:85445267..85447565-chr11:85447614..85449688,2	MCF-7	breast:
41	chr11:85468435..85470460-chr11:85522182..85523762,2	MCF-7	breast:
42	chr11:85476838..85478489-chr11:85489449..85492312,2	MCF-7	breast:
43	chr11:85456348..85458453-chr11:85459854..85462602,2	K562	blood:
44	chr11:85457148..85461266-chr11:85520193..85525185,6	MCF-7	breast:
45	chr11:85447416..85450012-chr11:85465090..85467738,2	MCF-7	breast:
46	chr11:85473245..85476644-chr11:85486524..85489414,3	MCF-7	breast:
47	chr11:85484288..85486316-chr11:85486416..85488624,2	MCF-7	breast:
48	chr11:85488026..85490392-chr11:85537176..85539130,2	MCF-7	breast:
49	chr11:85453675..85456598-chr11:85463651..85465546,2	MCF-7	breast:
50	chr11:85459647..85463395-chr11:85466382..85468116,3	K562	blood:

(count:3 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-AP000974.1-1	chr11:85468803-85469112	NONHSAT023448
2	lnc-CCDC89-7	chr11:85455444-85456066	expReg_chr11_8320_-
3	lnc-CCDC89-6	chr11:85452619-85452847	expReg_chr11_8315_-

No data

Variant related genes	Relation type
SYTL2	TF binding region
SYTL2	CpG island
ENSG00000199004	chromatin interactions
ENSG00000150672	chromatin interactions
ENSG00000171204	chromatin interactions
ENSG00000137504	chromatin interactions
ENSG00000137501	chromatin interactions

Extended variants
information (count: 2265 )
Associated
traits (count: 87 )

Variant overlapped rSNPs/rCNVs (count:2265 , 50 per page) page: 1 2 3 4 5 6 7 ... 46

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs641393	chr11:85436352-85436353	Weak transcription Genic enhancers Enhancers Strong transcription	TF binding region Chromatin interactive region	5 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
2	rs139341802	chr11:85436373-85436374	Weak transcription Genic enhancers Enhancers Strong transcription	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
3	rs116456191	chr11:85436375-85436376	Weak transcription Genic enhancers Enhancers Strong transcription	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
4	rs200045793	chr11:85436377-85436378	Weak transcription Genic enhancers Enhancers Strong transcription	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
5	rs112839651	chr11:85436378-85436379	Weak transcription Genic enhancers Enhancers Strong transcription	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
6	rs556669	chr11:85436394-85436395	Weak transcription Genic enhancers Enhancers Strong transcription	TF binding region Chromatin interactive region	3 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
7	rs147682106	chr11:85436400-85436401	Weak transcription Genic enhancers Enhancers Strong transcription Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
8	rs202186228	chr11:85436417-85436418	Weak transcription Enhancers Strong transcription Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
9	rs374173535	chr11:85436419-85436420	Weak transcription Enhancers Strong transcription Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
10	rs544924720	chr11:85436422-85436423	Weak transcription Enhancers Strong transcription Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
11	rs574541096	chr11:85436432-85436433	Weak transcription Enhancers Strong transcription Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
12	rs140826741	chr11:85436433-85436434	Weak transcription Enhancers Strong transcription Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
13	rs541947559	chr11:85436442-85436443	Weak transcription Enhancers Strong transcription Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
14	rs580459	chr11:85436500-85436501	Weak transcription Enhancers Strong transcription Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
15	rs376234818	chr11:85436528-85436529	Weak transcription Enhancers Strong transcription Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
16	rs114620129	chr11:85436529-85436530	Weak transcription Enhancers Strong transcription Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
17	rs371022633	chr11:85436535-85436536	Weak transcription Enhancers Strong transcription Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
18	rs374740990	chr11:85436554-85436555	Weak transcription Enhancers Strong transcription Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
19	rs201190191	chr11:85436593-85436594	Weak transcription Enhancers Strong transcription Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
20	rs115359501	chr11:85436596-85436597	Weak transcription Enhancers Strong transcription Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
21	rs147876201	chr11:85436601-85436602	ZNF genes & repeats Enhancers Weak transcription Strong transcription Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
22	rs371310974	chr11:85436616-85436617	ZNF genes & repeats Enhancers Weak transcription Strong transcription Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
23	rs141576170	chr11:85436639-85436640	ZNF genes & repeats Enhancers Weak transcription Strong transcription Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
24	rs200927301	chr11:85436647-85436648	ZNF genes & repeats Enhancers Weak transcription Strong transcription Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
25	rs111452195	chr11:85436673-85436674	ZNF genes & repeats Enhancers Weak transcription Strong transcription Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
26	rs556704728	chr11:85436681-85436682	ZNF genes & repeats Enhancers Weak transcription Strong transcription Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
27	rs566310078	chr11:85436689-85436690	ZNF genes & repeats Enhancers Weak transcription Strong transcription Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
28	rs202109604	chr11:85436691-85436692	ZNF genes & repeats Enhancers Weak transcription Strong transcription Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
29	rs598346	chr11:85436699-85436700	ZNF genes & repeats Enhancers Weak transcription Strong transcription Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
30	rs200304062	chr11:85436715-85436716	ZNF genes & repeats Enhancers Weak transcription Strong transcription Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
31	rs374384471	chr11:85436726-85436727	ZNF genes & repeats Enhancers Weak transcription Strong transcription Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
32	rs570135153	chr11:85436757-85436758	ZNF genes & repeats Enhancers Weak transcription Strong transcription Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
33	rs151015533	chr11:85436766-85436767	ZNF genes & repeats Enhancers Weak transcription Strong transcription Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
34	rs140804321	chr11:85436785-85436786	ZNF genes & repeats Enhancers Weak transcription Strong transcription Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
35	rs537456169	chr11:85436828-85436829	ZNF genes & repeats Enhancers Weak transcription Strong transcription Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
36	rs367864234	chr11:85436830-85436831	ZNF genes & repeats Enhancers Weak transcription Strong transcription Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
37	rs372066215	chr11:85436858-85436859	ZNF genes & repeats Enhancers Weak transcription Strong transcription Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
38	rs597480	chr11:85436868-85436869	ZNF genes & repeats Enhancers Weak transcription Strong transcription Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
39	rs138711024	chr11:85436875-85436876	ZNF genes & repeats Enhancers Weak transcription Strong transcription Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
40	rs377074608	chr11:85436899-85436900	ZNF genes & repeats Enhancers Weak transcription Strong transcription Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
41	rs369714015	chr11:85436910-85436911	ZNF genes & repeats Enhancers Weak transcription Strong transcription Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
42	rs375386505	chr11:85436967-85436968	ZNF genes & repeats Enhancers Weak transcription Strong transcription Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
43	rs201464962	chr11:85436979-85436980	ZNF genes & repeats Enhancers Weak transcription Strong transcription Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
44	rs372685279	chr11:85436983-85436984	ZNF genes & repeats Enhancers Weak transcription Strong transcription Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
45	rs375941893	chr11:85436991-85436992	ZNF genes & repeats Enhancers Weak transcription Strong transcription Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
46	rs534962134	chr11:85436999-85437000	ZNF genes & repeats Enhancers Weak transcription Strong transcription Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
47	rs116662107	chr11:85437007-85437008	Weak transcription Enhancers Strong transcription Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
48	rs116047730	chr11:85437012-85437013	Weak transcription Enhancers Strong transcription Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
49	rs575107119	chr11:85437034-85437035	Weak transcription Enhancers Strong transcription Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
50	rs201305323	chr11:85437091-85437092	Weak transcription Enhancers Strong transcription Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:87)

Disease	PMID	Source
Medulloblastoma	21979893	CNVD
Gastric cancer	17908304	CNVD
Multiple myeloma	20724749	CNVD
Wilms tumour	21544195	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Non-small cell lung cancer	21385341	CNVD
Intellectual disability	22102821	CNVD
Autism	22495311	CNVD
Acute myeloid leukemia	20729466	CNVD
Cancer	21637783	CNVD
Acute myeloid leukemia	16864856	CNVD
Chronic lymphocytic leukemia	21795749	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Neuroblastoma	21484798	CNVD
Ewing''s sarcoma	21437220	CNVD
Oral cancer	21386901	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	20837533	CNVD
Breast cancer	21264507	CNVD
Cervical cancer	21063398	CNVD
Glioblastoma multiforme	19960244	CNVD
Liposarcoma	21253554	CNVD
Neuroblastoma	18923524	CNVD
Neuroblastoma	18664255	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Multiple myeloma	17077331	CNVD
Neuroblastoma	17533364	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Multiple myeloma	16461302	CNVD
Glioblastoma multiforme	21080181	CNVD
Cancer	16751803	CNVD
Seminomas	18059402	CNVD
Cervical cancer	21062161	CNVD
Prostate cancer	18632612	CNVD
Breast cancer	17899364	CNVD
Breast cancer	17157792	CNVD
Esophageal squamous carcinoma	18350619	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
lymphocytic leukemia	21291569	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Neuroblastoma	18923191	CNVD
Multiple myeloma	16616336	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Cancer	22429812	CNVD
Breast cancer	21364760	CNVD
Ovarian neoplasms	16753589	CNVD
Breast cancer	16608533	CNVD
Myelofibrosis	22110671	CNVD
Acute lymphoblastic leukemia	17443227	CNVD
T-cell lymphomas	19863542	CNVD
Melanoma	18172304	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Colorectal cancer	16912164	CNVD
Mental retardation	17847001	CNVD
Melanoma	19509136	CNVD
Sudden cardiac death	19188705	CNVD
Prostate cancer	16573809	CNVD
Basal cell lymphoma	17053054	CNVD
Hepatocellular carcinoma	16785998	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Acute myeloid leukemia	21251322	CNVD
Breast cancer	21858162	CNVD
Breast cancer	21785460	CNVD
Cancer	22183965	CNVD
Melanoma	22183965	CNVD
Developmental delay	21147756	CNVD
Acute lymphoblastic leukemia	18458336	CNVD
Ductal carcinoma	22052326	CNVD
Obesity	20622171	CNVD
small cell lung cancer	20016488	CNVD
T-cell acute lymphoblastic leukemia	19406988	CNVD
Attention deficit hyperactivity disorder	22241247	CNVD
Breast cancer	21958427	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Lung cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Cancer	20164919	CNVD
Pancreatic cancer	17952125	CNVD
Breast cancer	22522925	CNVD
Lung cancer	18438408	CNVD
Cancer	17440070	CNVD

Chromatin state (count:1398 , 50 per page) page: 1 2 3 4 5 6 7 ... 28

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:85397200-85438600	Weak transcription	Colonic Mucosa	Colon
2	chr11:85412000-85436800	Weak transcription	Primary T killer memory cells from peripheral blood	blood
3	chr11:85412000-85438000	Weak transcription	Primary T helper cells fromperipheralblood	blood
4	chr11:85417600-85453000	Weak transcription	Gastric	stomach
5	chr11:85418400-85436400	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
6	chr11:85422600-85448600	Weak transcription	Fetal Intestine Large	intestine
7	chr11:85422800-85448200	Weak transcription	Primary T helper naive cells from peripheral blood	blood
8	chr11:85424000-85448600	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
9	chr11:85430200-85437800	Weak transcription	Duodenum Mucosa	Duodenum
10	chr11:85430400-85436600	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
11	chr11:85430400-85437400	Weak transcription	Stomach Mucosa	stomach
12	chr11:85430400-85459000	Weak transcription	H9 Cell Line	embryonic stem cell
13	chr11:85430400-85480400	Weak transcription	Aorta	Aorta
14	chr11:85430600-85437200	Weak transcription	Fetal Kidney	kidney
15	chr11:85430600-85447000	Weak transcription	Ovary	ovary
16	chr11:85430800-85445000	Weak transcription	Brain Inferior Temporal Lobe	brain
17	chr11:85430800-85447200	Weak transcription	Fetal Stomach	stomach
18	chr11:85430800-85448800	Weak transcription	Skeletal Muscle Female	skeletal muscle
19	chr11:85430800-85459000	Weak transcription	Fetal Muscle Trunk	muscle
20	chr11:85431000-85436400	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
21	chr11:85431000-85445200	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
22	chr11:85431200-85436600	Weak transcription	Osteobl	bone
23	chr11:85431400-85436400	Weak transcription	A549	lung
24	chr11:85431400-85436600	Weak transcription	Muscle Satellite Cultured Cells	--
25	chr11:85431400-85451600	Weak transcription	HSMMtube	muscle
26	chr11:85431600-85436600	Weak transcription	HSMM	muscle
27	chr11:85431800-85436600	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
28	chr11:85431800-85437600	Weak transcription	Sigmoid Colon	Sigmoid Colon
29	chr11:85431800-85466600	Weak transcription	Brain Substantia Nigra	brain
30	chr11:85432000-85436600	Weak transcription	ES-I3 Cell Line	embryonic stem cell
31	chr11:85432000-85436800	Weak transcription	HUES64 Cell Line	embryonic stem cell
32	chr11:85432000-85460800	Weak transcription	Fetal Muscle Leg	muscle
33	chr11:85432200-85448400	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
34	chr11:85433800-85448600	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
35	chr11:85434000-85439400	Strong transcription	Primary Natural Killer cells fromperipheralblood	blood
36	chr11:85434200-85439800	Strong transcription	Primary T cells from cord blood	blood
37	chr11:85434600-85436400	Weak transcription	HMEC	breast
38	chr11:85434600-85436600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
39	chr11:85434600-85437000	Weak transcription	Rectal Mucosa Donor 29	rectum
40	chr11:85434600-85445000	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
41	chr11:85434800-85448200	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
42	chr11:85435000-85436400	Weak transcription	Small Intestine	intestine
43	chr11:85435200-85437400	Weak transcription	Primary T cells fromperipheralblood	blood
44	chr11:85435200-85439000	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
45	chr11:85435400-85436400	Enhancers	HUVEC	blood vessel
46	chr11:85435400-85437800	Enhancers	NHLF	lung
47	chr11:85435400-85438000	Enhancers	NHDF-Ad	bronchial
48	chr11:85435400-85439000	Strong transcription	Rectal Mucosa Donor 31	rectum
49	chr11:85435400-85448600	Weak transcription	Primary hematopoietic stem cells short term culture	blood
50	chr11:85435600-85436400	Enhancers	Primary monocytes fromperipheralblood	blood

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