Variant report

Variant	nsv556476
Chromosome Location	chr11:120446830-120551100
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:1490)
CpG islands
(count:915)
Chromatin interactive
region (count:38)
LncRNA
region (count:1)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:1490 , 50 per page) page: 1 2 3 4 5 6 7 ... 30

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr11:120483774-120483787	HepG2	liver:	n/a	n/a
2	ARID3A	chr11:120545197-120545662	HepG2	liver:	n/a	n/a
3	ATF1	chr11:120469325-120469669	K562	blood:	n/a	n/a
4	ATF2	chr11:120516317-120516996	H1-hESC	embryonic stem cell:	n/a	n/a
5	ATF2	chr11:120483095-120484173	GM12878	blood:	n/a	n/a
6	ATF2	chr11:120516300-120516812	H1-hESC	embryonic stem cell:	n/a	n/a
7	ATF2	chr11:120450324-120450621	GM12878	blood:	n/a	n/a
8	ATF2	chr11:120528346-120529268	GM12878	blood:	n/a	n/a
9	ATF2	chr11:120528389-120528819	GM12878	blood:	n/a	n/a
10	ATF2	chr11:120483108-120484136	GM12878	blood:	n/a	n/a
11	ATF3	chr11:120530854-120531092	H1-hESC	embryonic stem cell:	n/a	n/a
12	BACH1	chr11:120530888-120531078	H1-hESC	embryonic stem cell:	n/a	n/a
13	BACH1	chr11:120461281-120461499	K562	blood:	n/a	chr11:120461396-120461410
14	BACH1	chr11:120523721-120523961	H1-hESC	embryonic stem cell:	n/a	n/a
15	BACH1	chr11:120461162-120461623	H1-hESC	embryonic stem cell:	n/a	chr11:120461396-120461410
16	BATF	chr11:120483175-120484427	GM12878	blood:	n/a	chr11:120483814-120483825
17	BATF	chr11:120484421-120484814	GM12878	blood:	n/a	chr11:120484655-120484666
18	BATF	chr11:120484448-120484836	GM12878	blood:	n/a	chr11:120484655-120484666
19	BATF	chr11:120528388-120528818	GM12878	blood:	n/a	n/a
20	BATF	chr11:120483651-120484022	GM12878	blood:	n/a	chr11:120483814-120483825
21	BCL11A	chr11:120483203-120484107	GM12878	blood:	n/a	n/a
22	BCL11A	chr11:120516449-120516762	H1-hESC	embryonic stem cell:	n/a	n/a
23	BCL11A	chr11:120516443-120516746	H1-hESC	embryonic stem cell:	n/a	n/a
24	BCL11A	chr11:120528874-120529217	GM12878	blood:	n/a	n/a
25	BCL11A	chr11:120483675-120483960	GM12878	blood:	n/a	n/a
26	BCL3	chr11:120551075-120551458	GM12878	blood:	n/a	chr11:120551310-120551319 chr11:120551311-120551320
27	BHLHE40	chr11:120529795-120530001	GM12878	blood:	n/a	chr11:120529889-120529898 chr11:120529888-120529897 chr11:120529889-120529898
28	BHLHE40	chr11:120528412-120529146	GM12878	blood:	n/a	n/a
29	BHLHE40	chr11:120530740-120531062	HepG2	liver:	n/a	chr11:120530949-120530958 chr11:120530948-120530957 chr11:120530942-120530963 chr11:120530948-120530957
30	BHLHE40	chr11:120500832-120501306	GM12878	blood:	n/a	n/a
31	BHLHE40	chr11:120530856-120531096	HepG2	liver:	n/a	chr11:120530949-120530958 chr11:120530948-120530957 chr11:120530942-120530963 chr11:120530948-120530957
32	BHLHE40	chr11:120530759-120531174	HepG2	liver:	n/a	chr11:120530949-120530958 chr11:120530948-120530957 chr11:120530942-120530963 chr11:120530948-120530957
33	BHLHE40	chr11:120530721-120531228	K562	blood:	n/a	chr11:120530949-120530958 chr11:120530948-120530957 chr11:120530942-120530963 chr11:120530948-120530957
34	BHLHE40	chr11:120530743-120531201	GM12878	blood:	n/a	chr11:120530949-120530958 chr11:120530948-120530957 chr11:120530942-120530963 chr11:120530948-120530957
35	BHLHE40	chr11:120450423-120450709	GM12878	blood:	n/a	n/a
36	BHLHE40	chr11:120530801-120531123	A549	lung:	n/a	chr11:120530949-120530958 chr11:120530948-120530957 chr11:120530942-120530963 chr11:120530948-120530957
37	BHLHE40	chr11:120504099-120504200	K562	blood:	n/a	n/a
38	BHLHE40	chr11:120483167-120484025	GM12878	blood:	n/a	n/a
39	BHLHE40	chr11:120545165-120545568	HepG2	liver:	n/a	n/a
40	BHLHE40	chr11:120469357-120469550	K562	blood:	n/a	n/a
41	BRCA1	chr11:120484240-120484304	GM12878	blood:	n/a	n/a
42	BRCA1	chr11:120530936-120531031	H1-hESC	embryonic stem cell:	n/a	n/a
43	CBX3	chr11:120523658-120524003	K562	blood:	n/a	n/a
44	CBX3	chr11:120523749-120524005	K562	blood:	n/a	n/a
45	CBX3	chr11:120530812-120531089	K562	blood:	n/a	n/a
46	CEBPB	chr11:120483078-120484231	GM12878	blood:	n/a	n/a
47	CEBPB	chr11:120522729-120522806	HepG2	liver:	n/a	n/a
48	CEBPB	chr11:120528541-120529351	GM12878	blood:	n/a	n/a
49	CEBPB	chr11:120463998-120464190	K562	blood:	n/a	n/a
50	CEBPB	chr11:120479567-120479981	ECC-1	luminal epithelium:	n/a	chr11:120479742-120479755 chr11:120479744-120479753 chr11:120479742-120479753 chr11:120479744-120479753 chr11:120479744-120479755 chr11:120479744-120479753 chr11:120479744-120479753

(count:915 , 50 per page) page: 1 2 3 4 5 6 7 ... 19

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr11:120461641-120461691	HRE	kidney:	n/a
2	chr11:120461210-120461260	GM12878	blood:	n/a
3	chr11:120530818-120530868	HUVEC	blood vessel:	n/a
4	chr11:120478401-120478451	PANC-1	pancreas:	n/a
5	chr11:120473325-120473375	GM19239	blood:	n/a
6	chr11:120461210-120461260	GM19239	blood:	n/a
7	chr11:120531034-120531084	NT2-D1	testis:	n/a
8	chr11:120516366-120516416	HRE	kidney:	n/a
9	chr11:120530355-120530405	RPTEC	kidney:	n/a
10	chr11:120530774-120530824	CMK	blood:	n/a
11	chr11:120461210-120461260	A549	lung:	n/a
12	chr11:120483833-120483883	H1-hESC	embryonic stem cell:	embryo
13	chr11:120478401-120478451	HIPEpiC	eye:	n/a
14	chr11:120531034-120531084	AoSMC	blood vessel:	n/a
15	chr11:120530774-120530824	NT2-D1	testis:	n/a
16	chr11:120473325-120473375	PrEC	prostate:	n/a
17	chr11:120530355-120530405	ProgFib	skin:	n/a
18	chr11:120478401-120478451	H1-hESC	embryonic stem cell:	embryo
19	chr11:120530818-120530868	NH-A	brain:	n/a
20	chr11:120530860-120530910	PANC-1	pancreas:	n/a
21	chr11:120461210-120461260	HL-60	blood:	n/a
22	chr11:120473325-120473375	HL-60	blood:	n/a
23	chr11:120516366-120516416	HIPEpiC	eye:	n/a
24	chr11:120470179-120470229	HRPEpiC	eye:	n/a
25	chr11:120473325-120473375	MCF-7	breast:	n/a
26	chr11:120530952-120531002	GM19239	blood:	n/a
27	chr11:120530973-120531023	ProgFib	skin:	n/a
28	chr11:120483833-120483883	AG04450	lung:	fetal
29	chr11:120470179-120470229	SK-N-MC	brain:	n/a
30	chr11:120478401-120478451	HRE	kidney:	n/a
31	chr11:120483833-120483883	HUVEC	blood vessel:	n/a
32	chr11:120545098-120545148	GM06990	blood:	n/a
33	chr11:120531034-120531084	HL-60	blood:	n/a
34	chr11:120530774-120530824	RPTEC	kidney:	n/a
35	chr11:120461210-120461260	HepG2	liver:	n/a
36	chr11:120530355-120530405	HEK293	kidney:	embryo
37	chr11:120473325-120473375	ProgFib	skin:	n/a
38	chr11:120530818-120530868	HIPEpiC	eye:	n/a
39	chr11:120530818-120530868	SAEC	small airway:	n/a
40	chr11:120461641-120461691	HEK293	kidney:	embryo
41	chr11:120530355-120530405	NT2-D1	testis:	n/a
42	chr11:120516366-120516416	MCF10A-Er-Src	breast:	n/a
43	chr11:120530355-120530405	GM12891	blood:	n/a
44	chr11:120516366-120516416	HEK293	kidney:	embryo
45	chr11:120530973-120531023	AG04449	skin:	fetal
46	chr11:120470179-120470229	AoSMC	blood vessel:	n/a
47	chr11:120483833-120483883	A549	lung:	n/a
48	chr11:120530774-120530824	GM12891	blood:	n/a
49	chr11:120531034-120531084	HPAEpiC	pulmonary alveolar:	n/a
50	chr11:120530774-120530824	PrEC	prostate:	n/a

(count:38 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr11:120517542..120520120-chr11:120522420..120525040,2	K562	blood:
2	chr11:120501095..120503196-chr11:120504558..120506204,2	K562	blood:
3	chr11:120504875..120507218-chr11:120535749..120537975,2	MCF-7	breast:
4	chr11:120388398..120391160-chr11:120466104..120467993,2	K562	blood:
5	chr11:120467473..120469063-chr11:120472319..120475182,2	K562	blood:
6	chr11:120107869..120109638-chr11:120477863..120480013,2	K562	blood:
7	chr11:120530509..120531385-chr11:121065365..121066021,2	K562	blood:
8	chr11:120517542..120520120-chr11:120522420..120525040,2	K562	blood:
9	chr11:120381891..120382435-chr11:120460879..120461658,2	K562	blood:
10	chr11:120505655..120508473-chr11:120521510..120523158,2	K562	blood:
11	chr11:120532271..120534183-chr11:120534962..120537445,2	K562	blood:
12	chr11:120507605..120508428-chr11:120669958..120670702,2	MCF-7	breast:
13	chr11:120532271..120534183-chr11:120534962..120537445,2	K562	blood:
14	chr11:120505655..120508473-chr11:120521510..120523158,2	K562	blood:
15	chr11:120471375..120475436-chr11:120476870..120481241,3	K562	blood:
16	chr11:120507989..120508501-chr11:120533904..120534456,2	MCF-7	breast:
17	chr11:120528370..120530123-chr11:120535416..120538098,2	MCF-7	breast:
18	chr11:120513720..120515462-chr11:120518340..120520224,2	K562	blood:
19	chr11:120507989..120508501-chr11:120533904..120534456,2	MCF-7	breast:
20	chr11:120513720..120515462-chr11:120518340..120520224,2	K562	blood:
21	chr11:120501095..120503196-chr11:120504558..120506204,2	K562	blood:
22	chr11:120508324..120510552-chr11:120512132..120514185,2	K562	blood:
23	chr11:120486491..120489401-chr11:120490672..120493068,2	K562	blood:
24	chr11:120471375..120475436-chr11:120476870..120481241,3	K562	blood:
25	chr11:120433772..120435610-chr11:120482758..120484609,2	K562	blood:
26	chr11:120508324..120510552-chr11:120512132..120514185,2	K562	blood:
27	chr11:120504875..120507218-chr11:120535749..120537975,2	MCF-7	breast:
28	chr11:120505005..120507153-chr11:120507628..120509568,2	K562	blood:
29	chr11:120505005..120507153-chr11:120507628..120509568,2	K562	blood:
30	chr11:120515523..120518309-chr2:64241158..64243356,2	K562	blood:
31	chr11:120530878..120531550-chr11:120672607..120673213,3	K562	blood:
32	chr11:120544382..120546404-chr11:120729409..120732174,2	K562	blood:
33	chr11:120444035..120445726-chr11:120447574..120449245,2	K562	blood:
34	chr11:120528370..120530123-chr11:120535416..120538098,2	MCF-7	breast:
35	chr11:120492939..120493692-chr11:120823234..120824125,2	MCF-7	breast:
36	chr11:120547489..120549157-chr11:120552655..120555191,2	K562	blood:
37	chr11:120467473..120469063-chr11:120472319..120475182,2	K562	blood:
38	chr11:120536730..120537365-chr11:120823323..120824097,2	K562	blood:

(count:1 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-TRIM29-5	chr11:120490643-120490976	NONHSAT024731

No data

Variant related genes	Relation type
TCEB1P22	TF binding region
TCEB1P22	CpG island
ENSG00000255006	chromatin interactions
ENSG00000149403	chromatin interactions

Extended variants
information (count: 4251 )
Associated
traits (count: 112 )

Variant overlapped rSNPs/rCNVs (count:4251 , 50 per page) page: 1 2 3 4 5 6 7 ... 86

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs12796185	chr11:120446830-120446831	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
2	rs35489084	chr11:120446850-120446851	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
3	rs118074629	chr11:120446919-120446920	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
4	rs34941044	chr11:120446927-120446928	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
5	rs12223239	chr11:120446953-120446954	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
6	rs543583881	chr11:120446964-120446965	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
7	rs7932669	chr11:120447026-120447027	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
8	rs186862039	chr11:120447031-120447032	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
9	rs11602840	chr11:120447068-120447069	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
10	rs150188498	chr11:120447101-120447102	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
11	rs138844847	chr11:120447102-120447103	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
12	rs192165348	chr11:120447119-120447120	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
13	rs184242735	chr11:120447120-120447121	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
14	rs563029037	chr11:120447125-120447126	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
15	rs532161858	chr11:120447132-120447133	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
16	rs551063088	chr11:120447133-120447134	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
17	rs4938817	chr11:120447136-120447137	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
18	rs549550535	chr11:120447145-120447146	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
19	rs567903461	chr11:120447213-120447214	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
20	rs528742233	chr11:120447234-120447235	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
21	rs190163572	chr11:120447235-120447236	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
22	rs201069371	chr11:120447254-120447255	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
23	rs193137004	chr11:120447258-120447259	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
24	rs539148047	chr11:120447270-120447271	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
25	rs185659280	chr11:120447338-120447339	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
26	rs569334960	chr11:120447367-120447368	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
27	rs142035005	chr11:120447430-120447431	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
28	rs34724750	chr11:120447453-120447454	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
29	rs555499502	chr11:120447469-120447470	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
30	rs548210864	chr11:120447487-120447488	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
31	rs573857823	chr11:120447540-120447541	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
32	rs537602903	chr11:120447543-120447544	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
33	rs146368436	chr11:120447544-120447545	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
34	rs549590446	chr11:120447545-120447546	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
35	rs117948513	chr11:120447554-120447555	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
36	rs577253942	chr11:120447589-120447590	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
37	rs75089928	chr11:120447609-120447610	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
38	rs138389974	chr11:120447623-120447624	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
39	rs374016319	chr11:120447629-120447630	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
40	rs563285097	chr11:120447649-120447650	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
41	rs534528923	chr11:120447653-120447654	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
42	rs111752240	chr11:120447671-120447672	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
43	rs539454366	chr11:120447710-120447711	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
44	rs542861232	chr11:120447758-120447759	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
45	rs552547804	chr11:120447804-120447805	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
46	rs528814596	chr11:120447877-120447878	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
47	rs143086547	chr11:120447894-120447895	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
48	rs374692730	chr11:120447911-120447912	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
49	rs368387282	chr11:120447936-120447937	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
50	rs571952842	chr11:120447952-120447953	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:112)

Disease	PMID	Source
Medulloblastoma	21979893	CNVD
Gastric cancer	17908304	CNVD
Multiple myeloma	20724749	CNVD
Wilms tumour	21544195	CNVD
Intellectual disability	22102821	CNVD
Autism	22495311	CNVD
Acute myeloid leukemia	20729466	CNVD
Cancer	21637783	CNVD
Acute myeloid leukemia	16864856	CNVD
Chronic lymphocytic leukemia	21795749	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Neuroblastoma	21484798	CNVD
Ewing''s sarcoma	21437220	CNVD
Oral cancer	21386901	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	20837533	CNVD
Breast cancer	21264507	CNVD
Cervical cancer	21063398	CNVD
Glioblastoma multiforme	19960244	CNVD
Liposarcoma	21253554	CNVD
Neuroblastoma	18923524	CNVD
Neuroblastoma	18664255	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Multiple myeloma	17077331	CNVD
Neuroblastoma	17533364	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Glioblastoma multiforme	21080181	CNVD
Cancer	16751803	CNVD
Seminomas	18059402	CNVD
Cervical cancer	21062161	CNVD
Esophageal squamous carcinoma	18350619	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
lymphocytic leukemia	21291569	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Neuroblastoma	18923191	CNVD
Cancer	22429812	CNVD
Breast cancer	16608533	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
T-cell lymphomas	19863542	CNVD
Melanoma	18172304	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Basal cell lymphoma	17053054	CNVD
Hepatocellular carcinoma	16785998	CNVD
Breast cancer	21858162	CNVD
Breast cancer	21785460	CNVD
Acute myeloid leukemia	21251322	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Breast cancer	21958427	CNVD
Lung cancer	18438408	CNVD
Ewing''s sarcoma	17952124	CNVD
Breast cancer	17133270	CNVD
Acute lymphoblastic leukemia	21098271	CNVD
small cell lung cancer	20016488	CNVD
Breast cancer	17603634	CNVD
Breast cancer	21364760	CNVD
Mental retardation	19966786	CNVD
Non-small cell lung cancer	21829676	CNVD
Invasive pancreatic ductal carcinoma	16982739	CNVD
Ovarian cancer	21720365	CNVD
Chronic lymphocytic leukemia	18922857	CNVD
Neuroblastoma	17327916	CNVD
Malignant melanoma	17260012	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Prostate cancer	16573809	CNVD
Prostate cancer	18632612	CNVD
Renal cell carcinoma	21668985	CNVD
Developmental delay	21147756	CNVD
Emanuel syndrome	21549014	CNVD
Emanuel syndrome	18184694	CNVD
Non-syndromic sensorineural hearing loss	18184694	CNVD
Acute lymphoblastic leukemia	22581003	CNVD
Ovarian neoplasms	16753589	CNVD
Chronic lymphocytic leukemia	21049055	CNVD
Cancer	21183584	CNVD
Retinoblastoma	22278416	CNVD
Myxofibrosarcoma	16751306	CNVD
Non-syndromic sensorineural hearing loss	16829213	CNVD
Non-syndromic sensorineural hearing loss	16760666	CNVD
Squamous cell cancer	20885788	CNVD
Renal cell carcinoma	18765545	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Neurocytoma	17123091	CNVD
Primary mediastinal b-cell lymphoma	17728785	CNVD
Central neurocytomas	17123091	CNVD
Congenital diaphragmatic hernia	21525063	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Multiple myeloma	16616336	CNVD
Myelofibrosis	22110671	CNVD
Hepatocellular carcinoma	16750200	CNVD
Multiple myeloma	17550852	CNVD
Ovine squamous-cell carcinoma	17599052	CNVD
Acute myeloid leukemia	19651601	CNVD
Adenoid cystic carcinoma	18698036	CNVD
Breast cancer	20409316	CNVD
Salivary gland adenoid cystic carcinoma	17545515	CNVD
Primary central nervous system lymphoma	21088137	CNVD
Non-small cell lung cancer	21385341	CNVD
Acute lymphoblastic leukemia	17443227	CNVD
Heart disease	20551144	CNVD
Malignant fibrous histiocytomas	21085701	CNVD
Non-syndromic sensorineural hearing loss	18496225	CNVD
Autism	22543975	CNVD
Breast cancer	21509527	CNVD
Barrett''s syndrome	19417022	CNVD
Pancreatic cancer	17952125	CNVD
Breast cancer	22522925	CNVD
early-passage human iPS cells	21368824	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD

Chromatin state (count:905 , 50 per page) page: 1 2 3 4 5 6 7 ... 19

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:120437200-120449200	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
2	chr11:120437200-120468000	Weak transcription	Right Atrium	heart
3	chr11:120444600-120450200	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
4	chr11:120446400-120448200	Weak transcription	HUES6 Cell Line	embryonic stem cell
5	chr11:120446600-120448400	Weak transcription	H9 Cell Line	embryonic stem cell
6	chr11:120446800-120450000	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
7	chr11:120447800-120448200	Enhancers	Pancreas	Pancrea
8	chr11:120448000-120448400	Enhancers	ES-I3 Cell Line	embryonic stem cell
9	chr11:120448200-120448800	Enhancers	HUES6 Cell Line	embryonic stem cell
10	chr11:120448400-120452600	Enhancers	GM12878-XiMat	blood
11	chr11:120448400-120454200	Weak transcription	ES-I3 Cell Line	embryonic stem cell
12	chr11:120448600-120448800	Enhancers	H9 Cell Line	embryonic stem cell
13	chr11:120449200-120449400	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
14	chr11:120449200-120449400	Bivalent Enhancer	HSMMtube	muscle
15	chr11:120449200-120449800	Enhancers	Fetal Lung	lung
16	chr11:120449400-120449800	Bivalent Enhancer	Fetal Muscle Trunk	muscle
17	chr11:120449600-120449800	Bivalent Enhancer	Fetal Stomach	stomach
18	chr11:120449800-120450000	Bivalent/Poised TSS	H1 Derived Mesenchymal Stem Cells	ES cell derived
19	chr11:120450200-120450400	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
20	chr11:120450200-120458400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
21	chr11:120450600-120450800	Enhancers	Fetal Brain Male	brain
22	chr11:120451600-120452400	Enhancers	Fetal Lung	lung
23	chr11:120452000-120452400	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
24	chr11:120452200-120452400	Enhancers	Primary monocytes fromperipheralblood	blood
25	chr11:120452200-120452400	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
26	chr11:120452400-120462600	Weak transcription	Fetal Lung	lung
27	chr11:120456600-120457200	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
28	chr11:120457000-120457400	Enhancers	GM12878-XiMat	blood
29	chr11:120458400-120458600	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
30	chr11:120458400-120458600	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
31	chr11:120458400-120458600	Enhancers	Fetal Brain Female	brain
32	chr11:120458400-120458800	Enhancers	Brain Germinal Matrix	brain
33	chr11:120458600-120459800	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
34	chr11:120458600-120459800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
35	chr11:120458600-120462400	Weak transcription	Fetal Brain Female	brain
36	chr11:120458800-120462000	Weak transcription	Brain Germinal Matrix	brain
37	chr11:120459800-120460000	Enhancers	Brain Substantia Nigra	brain
38	chr11:120459800-120460200	Enhancers	iPS-15b Cell Line	embryonic stem cell
39	chr11:120459800-120461800	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
40	chr11:120459800-120462800	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
41	chr11:120459800-120463200	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
42	chr11:120460200-120460400	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
43	chr11:120460200-120462000	Enhancers	Ovary	ovary
44	chr11:120460200-120462400	Weak transcription	iPS-15b Cell Line	embryonic stem cell
45	chr11:120460400-120460800	Bivalent Enhancer	H1 Derived Mesenchymal Stem Cells	ES cell derived
46	chr11:120460400-120461400	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
47	chr11:120460400-120461600	Enhancers	Fetal Adrenal Gland	Adrenal Gland
48	chr11:120460600-120460800	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
49	chr11:120460600-120460800	Enhancers	Brain Substantia Nigra	brain
50	chr11:120460600-120460800	Enhancers	Fetal Brain Male	brain

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links