Variant report

Variant nsv557533
Chromosome Location chr12:11494021-11575570
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:53 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:11493000-11494200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
2 chr12:11494200-11496400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
3 chr12:11496600-11496800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
4 chr12:11496800-11499400 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
5 chr12:11497200-11497800 Enhancers HepG2 liver
6 chr12:11497800-11498600 Enhancers Fetal Intestine Small intestine
7 chr12:11498200-11498600 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
8 chr12:11504000-11505000 Enhancers HUVEC blood vessel
9 chr12:11505000-11510400 Weak transcription HUVEC blood vessel
10 chr12:11506600-11507000 Enhancers Primary hematopoietic stem cells short term culture blood
11 chr12:11510000-11511000 Enhancers Primary neutrophils fromperipheralblood blood
12 chr12:11510000-11511200 Enhancers Fetal Adrenal Gland Adrenal Gland
13 chr12:11510400-11511000 Enhancers HUVEC blood vessel
14 chr12:11511000-11512400 Weak transcription HUVEC blood vessel
15 chr12:11511200-11519600 Weak transcription Fetal Adrenal Gland Adrenal Gland
16 chr12:11512400-11514000 Enhancers HUVEC blood vessel
17 chr12:11513000-11513800 Enhancers HMEC breast
18 chr12:11513000-11514000 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
19 chr12:11513000-11514000 Enhancers NHEK skin
20 chr12:11513400-11513600 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
21 chr12:11513600-11514200 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
22 chr12:11513600-11521200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
23 chr12:11516600-11517000 Enhancers HepG2 liver
24 chr12:11519600-11520200 Enhancers Fetal Adrenal Gland Adrenal Gland
25 chr12:11520000-11520600 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
26 chr12:11520200-11521200 Weak transcription Fetal Adrenal Gland Adrenal Gland
27 chr12:11521200-11521800 Enhancers Fetal Adrenal Gland Adrenal Gland
28 chr12:11521400-11521600 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
29 chr12:11529600-11529800 Weak transcription Primary hematopoietic stem cells blood
30 chr12:11530200-11531200 ZNF genes & repeats ES-UCSF4 Cell Line embryonic stem cell
31 chr12:11539200-11539400 Flanking Active TSS ES-UCSF4 Cell Line embryonic stem cell
32 chr12:11539400-11539800 Enhancers H9 Cell Line embryonic stem cell
33 chr12:11544000-11544800 Enhancers Fetal Adrenal Gland Adrenal Gland
34 chr12:11544000-11544800 Enhancers HUVEC blood vessel
35 chr12:11544800-11550000 Weak transcription HUVEC blood vessel
36 chr12:11544800-11550200 Weak transcription Fetal Adrenal Gland Adrenal Gland
37 chr12:11550000-11550600 Enhancers HUVEC blood vessel
38 chr12:11550000-11550800 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
39 chr12:11550000-11551000 Enhancers Primary neutrophils fromperipheralblood blood
40 chr12:11550200-11550800 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
41 chr12:11550200-11550800 Enhancers Fetal Adrenal Gland Adrenal Gland
42 chr12:11550200-11551000 Enhancers Primary monocytes fromperipheralblood blood
43 chr12:11550800-11551600 Weak transcription Fetal Adrenal Gland Adrenal Gland
44 chr12:11550800-11568400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
45 chr12:11551600-11551800 Enhancers Fetal Adrenal Gland Adrenal Gland
46 chr12:11560600-11561800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
47 chr12:11561000-11561600 Enhancers HMEC breast
48 chr12:11561000-11561800 Enhancers NHEK skin
49 chr12:11561800-11563000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
50 chr12:11568800-11569200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell

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