Variant report

Variant nsv557704
Chromosome Location chr12:20842041-20893980
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:136 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:20834200-20842200 Weak transcription Ovary ovary
2 chr12:20834200-20846600 Weak transcription Fetal Stomach stomach
3 chr12:20838800-20849800 Weak transcription Hela-S3 cervix
4 chr12:20846600-20847200 Enhancers iPS-15b Cell Line embryonic stem cell
5 chr12:20846600-20847400 Enhancers Fetal Stomach stomach
6 chr12:20846800-20847000 Enhancers ES-UCSF4 Cell Line embryonic stem cell
7 chr12:20846800-20848000 Enhancers Cortex derived primary cultured neurospheres brain
8 chr12:20846800-20848200 Enhancers Adipose Nuclei Adipose
9 chr12:20847000-20848200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
10 chr12:20847000-20848400 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
11 chr12:20847000-20849400 Enhancers iPS-18 Cell Line embryonic stem cell
12 chr12:20847200-20847600 Weak transcription iPS-15b Cell Line embryonic stem cell
13 chr12:20847200-20848800 Enhancers HUES48 Cell Line embryonic stem cell
14 chr12:20847400-20848400 Weak transcription Fetal Stomach stomach
15 chr12:20847600-20849400 Enhancers iPS-15b Cell Line embryonic stem cell
16 chr12:20847800-20848000 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
17 chr12:20847800-20848400 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
18 chr12:20847800-20849400 Enhancers HUES64 Cell Line embryonic stem cell
19 chr12:20847800-20849800 Enhancers HUES6 Cell Line embryonic stem cell
20 chr12:20847800-20850000 Active TSS Brain Anterior Caudate brain
21 chr12:20848000-20848200 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
22 chr12:20848000-20848200 Flanking Active TSS Cortex derived primary cultured neurospheres brain
23 chr12:20848000-20848200 Active TSS Fetal Lung lung
24 chr12:20848000-20848400 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
25 chr12:20848000-20848600 Enhancers H9 Cell Line embryonic stem cell
26 chr12:20848000-20848600 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
27 chr12:20848000-20848600 Active TSS Right Atrium heart
28 chr12:20848000-20848800 Flanking Active TSS H9 Derived Neuron Cultured Cells ES cell derived
29 chr12:20848000-20849000 Enhancers iPS-20b Cell Line embryonic stem cell
30 chr12:20848000-20849200 Active TSS Ganglion Eminence derived primary cultured neurospheres brain
31 chr12:20848000-20849800 Active TSS Brain Hippocampus Middle brain
32 chr12:20848200-20848400 Enhancers Cortex derived primary cultured neurospheres brain
33 chr12:20848200-20848400 Flanking Active TSS Fetal Lung lung
34 chr12:20848200-20848600 Flanking Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
35 chr12:20848200-20848600 Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
36 chr12:20848200-20848600 Flanking Active TSS Adipose Nuclei Adipose
37 chr12:20848200-20848800 Enhancers H1 Cell Line embryonic stem cell
38 chr12:20848200-20848800 Enhancers NHDF-Ad bronchial
39 chr12:20848200-20849600 Enhancers ES-UCSF4 Cell Line embryonic stem cell
40 chr12:20848400-20848600 Flanking Active TSS Cortex derived primary cultured neurospheres brain
41 chr12:20848400-20848800 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
42 chr12:20848400-20848800 Active TSS Brain Cingulate Gyrus brain
43 chr12:20848400-20848800 Flanking Active TSS Fetal Stomach stomach
44 chr12:20848400-20849000 Active TSS Brain Inferior Temporal Lobe brain
45 chr12:20848400-20849400 Active TSS Brain Substantia Nigra brain
46 chr12:20848400-20849400 Weak transcription Duodenum Smooth Muscle Duodenum
47 chr12:20848400-20849400 Weak transcription Fetal Lung lung
48 chr12:20848400-20849800 Active TSS Brain Dorsolateral Prefrontal Cortex brain
49 chr12:20848400-20849800 Enhancers Fetal Muscle Leg muscle
50 chr12:20848400-20851800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived

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