Variant report

Variant nsv557717
Chromosome Location chr12:21124371-21404832
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:157 , 50 per page) page: 1 2 3 4
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:21125200-21125600 ZNF genes & repeats iPS DF 19.11 Cell Line embryonic stem cell
2 chr12:21138000-21139200 Enhancers Dnd41 blood
3 chr12:21138200-21145200 Weak transcription Liver Liver
4 chr12:21142800-21143000 ZNF genes & repeats Gastric stomach
5 chr12:21145200-21146400 ZNF genes & repeats Liver Liver
6 chr12:21146400-21154400 Weak transcription Liver Liver
7 chr12:21154400-21155000 ZNF genes & repeats Liver Liver
8 chr12:21154800-21155000 Enhancers Gastric stomach
9 chr12:21155000-21156800 Weak transcription Liver Liver
10 chr12:21171000-21172800 Weak transcription Liver Liver
11 chr12:21172800-21173600 Strong transcription Liver Liver
12 chr12:21173600-21176000 Weak transcription Liver Liver
13 chr12:21176000-21178200 Strong transcription Liver Liver
14 chr12:21178200-21178400 Enhancers Sigmoid Colon Sigmoid Colon
15 chr12:21178200-21179800 Weak transcription Liver Liver
16 chr12:21179400-21179600 Enhancers A549 lung
17 chr12:21179800-21180000 Strong transcription Liver Liver
18 chr12:21180000-21180200 ZNF genes & repeats Liver Liver
19 chr12:21180200-21180600 Weak transcription Liver Liver
20 chr12:21187400-21187800 Active TSS Psoas Muscle Psoas
21 chr12:21207800-21226600 Weak transcription Liver Liver
22 chr12:21226000-21226600 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
23 chr12:21226200-21227000 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
24 chr12:21226200-21227200 Enhancers ES-I3 Cell Line embryonic stem cell
25 chr12:21226200-21227600 Enhancers HUES6 Cell Line embryonic stem cell
26 chr12:21226200-21227800 Enhancers NH-A brain
27 chr12:21226600-21227000 Enhancers ES-UCSF4 Cell Line embryonic stem cell
28 chr12:21226600-21227200 Strong transcription Liver Liver
29 chr12:21227000-21231000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
30 chr12:21227200-21227400 Flanking Active TSS ES-I3 Cell Line embryonic stem cell
31 chr12:21227200-21241600 Weak transcription Liver Liver
32 chr12:21227400-21227600 Enhancers ES-I3 Cell Line embryonic stem cell
33 chr12:21227600-21227800 Active TSS ES-I3 Cell Line embryonic stem cell
34 chr12:21257400-21258200 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
35 chr12:21258000-21258600 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
36 chr12:21262600-21262800 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
37 chr12:21262600-21263000 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
38 chr12:21263400-21263600 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
39 chr12:21264400-21264600 Active TSS Liver Liver
40 chr12:21264600-21264800 Flanking Active TSS Liver Liver
41 chr12:21264800-21265000 Enhancers Liver Liver
42 chr12:21271000-21271600 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
43 chr12:21271400-21272000 Active TSS A549 lung
44 chr12:21271600-21272600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
45 chr12:21272000-21272600 Enhancers A549 lung
46 chr12:21272200-21272600 Enhancers HUES64 Cell Line embryonic stem cell
47 chr12:21272400-21272800 Enhancers H1 Cell Line embryonic stem cell
48 chr12:21272400-21272800 Enhancers HUES48 Cell Line embryonic stem cell
49 chr12:21272600-21272800 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
50 chr12:21275400-21276200 Active TSS H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived

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