Variant report

Variant nsv558247
Chromosome Location chr12:33481504-34245756
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:1397 , 50 per page) page: 1 2 3 4 5 6 7 ... 28
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:33483400-33484200 Enhancers Breast Myoepithelial Primary Cells Breast
2 chr12:33484000-33485200 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
3 chr12:33484600-33485000 Enhancers iPS-18 Cell Line embryonic stem cell
4 chr12:33484800-33485200 Enhancers HUES64 Cell Line embryonic stem cell
5 chr12:33484800-33485200 Active TSS iPS-15b Cell Line embryonic stem cell
6 chr12:33484800-33485200 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
7 chr12:33485000-33485200 Enhancers HUES6 Cell Line embryonic stem cell
8 chr12:33493800-33494600 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
9 chr12:33495800-33496600 Enhancers Fetal Intestine Large intestine
10 chr12:33510400-33510600 Enhancers iPS-20b Cell Line embryonic stem cell
11 chr12:33510600-33511600 Weak transcription iPS-20b Cell Line embryonic stem cell
12 chr12:33511600-33512000 Enhancers iPS-20b Cell Line embryonic stem cell
13 chr12:33511800-33512200 Enhancers ES-I3 Cell Line embryonic stem cell
14 chr12:33511800-33512200 Enhancers iPS-15b Cell Line embryonic stem cell
15 chr12:33525600-33534600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
16 chr12:33534600-33535400 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
17 chr12:33535400-33536600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
18 chr12:33536600-33536800 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
19 chr12:33536800-33537200 Enhancers Brain Cingulate Gyrus brain
20 chr12:33536800-33537600 Enhancers Brain Germinal Matrix brain
21 chr12:33537800-33540000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
22 chr12:33542600-33543000 Enhancers Fetal Adrenal Gland Adrenal Gland
23 chr12:33543000-33544400 Weak transcription Fetal Adrenal Gland Adrenal Gland
24 chr12:33544400-33545400 Enhancers Fetal Adrenal Gland Adrenal Gland
25 chr12:33566400-33575400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
26 chr12:33570400-33575800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
27 chr12:33574000-33576200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
28 chr12:33575400-33577600 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
29 chr12:33575800-33578200 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
30 chr12:33576200-33577400 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
31 chr12:33577400-33580400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
32 chr12:33577600-33578400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
33 chr12:33578200-33588400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
34 chr12:33578400-33579200 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
35 chr12:33579200-33590600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
36 chr12:33586800-33589800 Weak transcription K562 blood
37 chr12:33588200-33588400 Enhancers HUES64 Cell Line embryonic stem cell
38 chr12:33588400-33590000 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
39 chr12:33589800-33595600 Active TSS K562 blood
40 chr12:33590000-33590600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
41 chr12:33590200-33591200 Bivalent/Poised TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
42 chr12:33590400-33590600 Bivalent Enhancer iPS-15b Cell Line embryonic stem cell
43 chr12:33590400-33590600 Active TSS ES-UCSF4 Cell Line embryonic stem cell
44 chr12:33590600-33590800 Bivalent Enhancer iPS-18 Cell Line embryonic stem cell
45 chr12:33590600-33591000 Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
46 chr12:33590600-33591200 Transcr. at gene 5' and 3' H9 Derived Neuron Cultured Cells ES cell derived
47 chr12:33590600-33591200 Flanking Bivalent TSS/Enh iPS-15b Cell Line embryonic stem cell
48 chr12:33590600-33592000 Bivalent/Poised TSS ES-UCSF4 Cell Line embryonic stem cell
49 chr12:33590600-33593200 Active TSS Brain Anterior Caudate brain
50 chr12:33590600-33593400 Bivalent/Poised TSS iPS-20b Cell Line embryonic stem cell

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