Variant report

Variant nsv558582
Chromosome Location chr12:38919524-38989405
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:76 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:38919800-38922000 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
2 chr12:38921400-38921800 Enhancers HUES48 Cell Line embryonic stem cell
3 chr12:38936000-38936600 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
4 chr12:38936000-38938000 Enhancers iPS-20b Cell Line embryonic stem cell
5 chr12:38936000-38938400 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
6 chr12:38936200-38936400 Enhancers ES-UCSF4 Cell Line embryonic stem cell
7 chr12:38936200-38936800 Enhancers ES-WA7 Cell Line embryonic stem cell
8 chr12:38936200-38938400 Enhancers HUES48 Cell Line embryonic stem cell
9 chr12:38936400-38937200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
10 chr12:38936400-38937600 Enhancers H1 Cell Line embryonic stem cell
11 chr12:38936400-38938600 Enhancers ES-I3 Cell Line embryonic stem cell
12 chr12:38936400-38939000 Enhancers HUES6 Cell Line embryonic stem cell
13 chr12:38936400-38939000 Enhancers iPS-15b Cell Line embryonic stem cell
14 chr12:38936600-38937200 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
15 chr12:38936800-38937200 Active TSS ES-WA7 Cell Line embryonic stem cell
16 chr12:38936800-38937400 Enhancers Hela-S3 cervix
17 chr12:38936800-38939000 Enhancers HUES64 Cell Line embryonic stem cell
18 chr12:38936800-38939000 Enhancers iPS-18 Cell Line embryonic stem cell
19 chr12:38937200-38937400 Flanking Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
20 chr12:38937200-38938000 Enhancers Duodenum Smooth Muscle Duodenum
21 chr12:38937200-38938600 Enhancers H9 Cell Line embryonic stem cell
22 chr12:38937200-38938600 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
23 chr12:38937200-38939000 Enhancers ES-UCSF4 Cell Line embryonic stem cell
24 chr12:38937400-38939000 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
25 chr12:38937400-38941000 Weak transcription Hela-S3 cervix
26 chr12:38937600-38938200 Weak transcription H1 Cell Line embryonic stem cell
27 chr12:38937800-38939000 Enhancers Colon Smooth Muscle Colon
28 chr12:38938000-38938200 Flanking Active TSS iPS-20b Cell Line embryonic stem cell
29 chr12:38938000-38938400 Active TSS Duodenum Smooth Muscle Duodenum
30 chr12:38938200-38938400 Enhancers H1 Cell Line embryonic stem cell
31 chr12:38938200-38938600 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
32 chr12:38938200-38938600 Enhancers Rectal Smooth Muscle rectum
33 chr12:38938200-38938800 Active TSS iPS-20b Cell Line embryonic stem cell
34 chr12:38938400-38938600 Flanking Active TSS Duodenum Smooth Muscle Duodenum
35 chr12:38938400-38938800 Flanking Active TSS HUES48 Cell Line embryonic stem cell
36 chr12:38938800-38939000 Enhancers HUES48 Cell Line embryonic stem cell
37 chr12:38938800-38939200 Enhancers iPS-20b Cell Line embryonic stem cell
38 chr12:38941000-38941800 Enhancers Hela-S3 cervix
39 chr12:38941200-38942000 Enhancers HMEC breast
40 chr12:38941200-38942600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
41 chr12:38949600-38949800 Enhancers ES-I3 Cell Line embryonic stem cell
42 chr12:38949600-38950400 Enhancers ES-UCSF4 Cell Line embryonic stem cell
43 chr12:38949600-38950400 Enhancers Rectal Smooth Muscle rectum
44 chr12:38949600-38950600 Enhancers Hela-S3 cervix
45 chr12:38949600-38951000 Enhancers Colon Smooth Muscle Colon
46 chr12:38949800-38950000 Active TSS Monocytes-CD14+_RO01746 blood
47 chr12:38949800-38950200 Flanking Active TSS ES-I3 Cell Line embryonic stem cell
48 chr12:38950000-38950400 Enhancers iPS-15b Cell Line embryonic stem cell
49 chr12:38950000-38950400 Flanking Active TSS Monocytes-CD14+_RO01746 blood
50 chr12:38950000-38950800 Enhancers HUES6 Cell Line embryonic stem cell

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