Variant report

Variant	nsv558782
Chromosome Location	chr12:46254995-46286683
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr12:46273425-46273625	K562	blood:	n/a	n/a
2	BACH1	chr12:46258844-46258973	K562	blood:	n/a	n/a
3	CBX3	chr12:46279316-46279705	K562	blood:	n/a	n/a
4	CCNT2	chr12:46273023-46273460	K562	blood:	n/a	n/a
5	CEBPB	chr12:46263638-46263751	Hela-S3	cervix:	n/a	chr12:46263717-46263726 chr12:46263717-46263726 chr12:46263715-46263726 chr12:46263717-46263726 chr12:46263717-46263726
6	CEBPB	chr12:46257206-46257492	ECC-1	luminal epithelium:	n/a	chr12:46257320-46257331
7	CEBPB	chr12:46257193-46257471	MCF-7	breast:	n/a	chr12:46257320-46257331
8	CEBPB	chr12:46257167-46257440	A549	lung:	n/a	chr12:46257320-46257331
9	CEBPB	chr12:46257153-46257455	IMR90	lung:	n/a	chr12:46257320-46257331
10	CEBPB	chr12:46257186-46257456	H1-hESC	embryonic stem cell:	n/a	chr12:46257320-46257331
11	CEBPB	chr12:46257179-46257418	HepG2	liver:	n/a	chr12:46257320-46257331
12	CEBPB	chr12:46263611-46263831	A549	lung:	n/a	chr12:46263717-46263726 chr12:46263717-46263726 chr12:46263715-46263726 chr12:46263717-46263726 chr12:46263717-46263726
13	CEBPB	chr12:46257175-46257469	K562	blood:	n/a	chr12:46257320-46257331
14	CEBPB	chr12:46276989-46277291	Hela-S3	cervix:	n/a	chr12:46277141-46277152
15	CEBPB	chr12:46263591-46263767	K562	blood:	n/a	chr12:46263717-46263726 chr12:46263717-46263726 chr12:46263715-46263726 chr12:46263717-46263726 chr12:46263717-46263726
16	CEBPB	chr12:46263608-46263814	IMR90	lung:	n/a	chr12:46263717-46263726 chr12:46263717-46263726 chr12:46263715-46263726 chr12:46263717-46263726 chr12:46263717-46263726
17	CEBPB	chr12:46257169-46257450	K562	blood:	n/a	chr12:46257320-46257331
18	CEBPB	chr12:46257222-46257434	A549	lung:	n/a	chr12:46257320-46257331
19	CEBPB	chr12:46257226-46257414	Hela-S3	cervix:	n/a	chr12:46257320-46257331
20	CEBPB	chr12:46263549-46263783	HepG2	liver:	n/a	chr12:46263717-46263726 chr12:46263717-46263726 chr12:46263715-46263726 chr12:46263717-46263726 chr12:46263717-46263726
21	CHD2	chr12:46266332-46266484	K562	blood:	n/a	n/a
22	CTCF	chr12:46284229-46284319	GM12878	blood:	n/a	chr12:46284258-46284274 chr12:46284257-46284275
23	CTCF	chr12:46284180-46284330	HCFaa	heart:	n/a	chr12:46284258-46284274 chr12:46284257-46284275
24	CTCF	chr12:46284160-46284310	AG10803	skin:	n/a	chr12:46284258-46284274 chr12:46284257-46284275
25	CTCF	chr12:46284067-46284331	K562	blood:	n/a	chr12:46284258-46284274 chr12:46284257-46284275
26	CTCF	chr12:46284120-46284270	HPAF	blood vessel:	n/a	n/a
27	CTCF	chr12:46284080-46284230	NHDF-neo	bronchial:	n/a	n/a
28	CTCF	chr12:46284160-46284310	HMF	breast:	n/a	chr12:46284258-46284274 chr12:46284257-46284275
29	CTCF	chr12:46274920-46275070	HEK293	kidney:	n/a	n/a
30	CTCF	chr12:46284180-46284330	HCPEpiC	choroid plexus:	n/a	chr12:46284258-46284274 chr12:46284257-46284275
31	CTCF	chr12:46284263-46284302	GM10248	blood:	n/a	n/a
32	CTCF	chr12:46277916-46277949	LNCaP	prostate:	n/a	n/a
33	CTCF	chr12:46284187-46284353	LNCaP	prostate:	n/a	chr12:46284258-46284274 chr12:46284257-46284275
34	CTCF	chr12:46284204-46284351	HUVEC	blood vessel:	n/a	chr12:46284258-46284274 chr12:46284257-46284275
35	CTCF	chr12:46284220-46284370	HCPEpiC	choroid plexus:	n/a	chr12:46284258-46284274 chr12:46284257-46284275
36	CTCF	chr12:46274880-46275030	HepG2	liver:	n/a	n/a
37	CTCF	chr12:46274880-46275030	HEK293	kidney:	n/a	n/a
38	CTCF	chr12:46284140-46284290	HMEC	breast:	n/a	chr12:46284258-46284274 chr12:46284257-46284275
39	CTCF	chr12:46286400-46286550	AG10803	skin:	n/a	n/a
40	CTCF	chr12:46274680-46274830	HVMF	connective:	n/a	n/a
41	CTCF	chr12:46284247-46284323	Spleen_OC	spleen:	n/a	chr12:46284258-46284274 chr12:46284257-46284275
42	CTCF	chr12:46280340-46280490	K562	blood:	n/a	n/a
43	CTCF	chr12:46284326-46284331	Spleen_OC	spleen:	n/a	n/a
44	CTCF	chr12:46284220-46284370	HCM	heart:	n/a	chr12:46284258-46284274 chr12:46284257-46284275
45	CTCF	chr12:46274940-46275090	MCF-7	breast:	n/a	n/a
46	CTCF	chr12:46274940-46275090	Hela-S3	cervix:	n/a	n/a
47	CTCF	chr12:46284040-46284190	AG04450	lung:	n/a	n/a
48	CTCF	chr12:46274780-46274930	A549	lung:	n/a	n/a
49	CTCF	chr12:46274920-46275070	HCPEpiC	choroid plexus:	n/a	n/a
50	CTCF	chr12:46278140-46278192	GM13976	blood:	n/a	n/a

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr12:46273255-46273305	GM19239	blood:	n/a
2	chr12:46273255-46273305	HCF	heart:	n/a
3	chr12:46273255-46273305	HIPEpiC	eye:	n/a
4	chr12:46273255-46273305	SK-N-MC	brain:	n/a
5	chr12:46273255-46273305	HCPEpiC	choroid plexus:	n/a
6	chr12:46273255-46273305	HEK293	kidney:	embryo
7	chr12:46273255-46273305	IMR90	lung:	fetal
8	chr12:46273255-46273305	HCM	heart:	n/a
9	chr12:46273255-46273305	A549	lung:	n/a
10	chr12:46273255-46273305	Hepatocyte	liver:	n/a
11	chr12:46273255-46273305	ovcar-3	ovarian:	n/a
12	chr12:46273255-46273305	HepG2	liver:	n/a
13	chr12:46273255-46273305	AG10803	skin:	n/a
14	chr12:46273255-46273305	K562	blood:	n/a
15	chr12:46273255-46273305	ECC-1	luminal epithelium:	n/a
16	chr12:46273255-46273305	NH-A	brain:	n/a
17	chr12:46273255-46273305	AG09309	skin:	n/a
18	chr12:46273255-46273305	HUVEC	blood vessel:	n/a
19	chr12:46273255-46273305	GM12892	blood:	n/a
20	chr12:46273255-46273305	NHBE	bronchial:	n/a
21	chr12:46273255-46273305	MCF10A-Er-Src	breast:	n/a
22	chr12:46273255-46273305	HEEpiC	esophagus:	n/a
23	chr12:46273255-46273305	HMEC	breast:	n/a
24	chr12:46273255-46273305	AG09319	gingival:	n/a
25	chr12:46273255-46273305	SK-N-SH	brain:	n/a
26	chr12:46273255-46273305	RPTEC	kidney:	n/a
27	chr12:46273255-46273305	PrEC	prostate:	n/a
28	chr12:46273255-46273305	HRE	kidney:	n/a
29	chr12:46273255-46273305	AG04449	skin:	fetal
30	chr12:46273255-46273305	PANC-1	pancreas:	n/a
31	chr12:46273255-46273305	HAEpiC	amniotic membrane:	n/a
32	chr12:46273255-46273305	NHDF-neo	bronchial:	n/a
33	chr12:46273255-46273305	SK-N-SH_RA	brain:	n/a
34	chr12:46273255-46273305	PFSK-1	brain:	n/a
35	chr12:46273255-46273305	HL-60	blood:	n/a
36	chr12:46273255-46273305	SAEC	small airway:	n/a
37	chr12:46273255-46273305	BJ	skin:	n/a
38	chr12:46273255-46273305	CMK	blood:	n/a
39	chr12:46273255-46273305	GM06990	blood:	n/a
40	chr12:46273255-46273305	HCT-116	colon:	n/a
41	chr12:46273255-46273305	U87	brain:	n/a
42	chr12:46273255-46273305	ProgFib	skin:	n/a
43	chr12:46273255-46273305	H1-hESC	embryonic stem cell:	embryo
44	chr12:46273255-46273305	MCF-7	breast:	n/a
45	chr12:46273255-46273305	GM12878	blood:	n/a
46	chr12:46273255-46273305	HNPCEpiC	eye:	n/a
47	chr12:46273255-46273305	T-47D	breast:	n/a
48	chr12:46273255-46273305	Caco-2	colon:	n/a
49	chr12:46273255-46273305	Jurkat	blood:	n/a
50	chr12:46273255-46273305	GM12891	blood:	n/a

No.	Distal block	Cell Line	Cell type
1	chr12:46259012..46261878-chr12:46262508..46265462,3	MCF-7	breast:
2	chr12:46273812..46279067-chr12:46282105..46286818,5	K562	blood:
3	chr12:46123074..46125001-chr12:46284357..46286236,2	K562	blood:
4	chr12:46273812..46279067-chr12:46282105..46286818,5	K562	blood:
5	chr12:46244727..46246265-chr12:46253414..46255064,2	K562	blood:
6	chr12:46282601..46285658-chr12:46286027..46288801,3	K562	blood:
7	chr12:45883996..45884939-chr12:46283903..46284713,3	MCF-7	breast:
8	chr12:46271607..46274125-chr12:46289637..46291918,2	K562	blood:
9	chr12:46121836..46124334-chr12:46269395..46271952,3	K562	blood:
10	chr12:46121122..46123721-chr12:46273373..46275496,2	MCF-7	breast:
11	chr12:46283214..46284987-chr12:46286727..46288375,2	MCF-7	breast:
12	chr12:46121036..46122652-chr12:46277121..46278635,2	K562	blood:
13	chr12:46282601..46285658-chr12:46286027..46288801,3	K562	blood:
14	chr12:46274448..46276066-chr12:46279295..46280833,2	MCF-7	breast:
15	chr12:46120711..46122755-chr12:46271745..46274620,3	K562	blood:
16	chr12:46122283..46124840-chr12:46276050..46278678,3	MCF-7	breast:
17	chr12:46259012..46261878-chr12:46262508..46265462,3	MCF-7	breast:
18	chr12:46197632..46200157-chr12:46272814..46274582,2	MCF-7	breast:
19	chr12:46122767..46124375-chr12:46276230..46278383,2	K562	blood:
20	chr12:46272488..46274410-chr12:46275573..46277238,2	K562	blood:
21	chr12:46122710..46125113-chr12:46278918..46282983,3	MCF-7	breast:
22	chr12:46120556..46123055-chr12:46253853..46256822,2	MCF-7	breast:
23	chr12:46127112..46128788-chr12:46286109..46287851,2	K562	blood:
24	chr12:46276041..46277670-chr12:46279802..46282601,2	K562	blood:

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-SCAF11-5	chr12:46274733-46276049	NONHSAT027838
2	lnc-ANO6-5	chr12:46267812-46268111	NONHSAT027837

Variant related genes	Relation type
ARID2	TF binding region
KNOP1P2	TF binding region
RN7SL246P	TF binding region
ARID2	CpG island
KNOP1P2	CpG island
RN7SL246P	CpG island
ENSG00000189079	chromatin interactions
ENSG00000270429	chromatin interactions
ENSG00000273015	chromatin interactions

Extended variants
information (count: 1035 )
Associated
traits (count: 64 )

Variant overlapped rSNPs/rCNVs (count:1035 , 50 per page) page: 1 2 3 4 5 6 7 ... 21

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs7303119	chr12:46254995-46254996	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
2	rs568520724	chr12:46255036-46255037	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
3	rs535799482	chr12:46255047-46255048	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
4	rs549289645	chr12:46255079-46255080	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
5	rs188329448	chr12:46255112-46255113	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
6	rs528475016	chr12:46255257-46255258	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
7	rs116889588	chr12:46255337-46255338	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
8	rs12816785	chr12:46255362-46255363	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
9	rs142705578	chr12:46255363-46255364	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
10	rs538574124	chr12:46255364-46255365	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
11	rs11303020	chr12:46255384-46255385	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
12	rs75976064	chr12:46255386-46255387	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
13	rs553512991	chr12:46255398-46255399	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
14	rs571699222	chr12:46255429-46255430	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
15	rs539127415	chr12:46255508-46255509	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
16	rs181056581	chr12:46255533-46255534	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
17	rs575728369	chr12:46255647-46255648	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
18	rs142407057	chr12:46255673-46255674	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
19	rs529377486	chr12:46255744-46255745	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
20	rs546964811	chr12:46255752-46255753	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
21	rs186340424	chr12:46255754-46255755	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
22	rs565080653	chr12:46255828-46255829	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
23	rs532166072	chr12:46255850-46255851	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
24	rs146650540	chr12:46255896-46255897	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
25	rs562217591	chr12:46255940-46255941	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
26	rs189957760	chr12:46255944-46255945	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
27	rs150750117	chr12:46255951-46255952	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
28	rs181678914	chr12:46255953-46255954	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
29	rs567895225	chr12:46255981-46255982	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
30	rs528781435	chr12:46256040-46256041	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
31	rs546920658	chr12:46256163-46256164	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
32	rs12311899	chr12:46256218-46256219	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
33	rs569202639	chr12:46256251-46256252	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
34	rs540128002	chr12:46256302-46256303	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
35	rs552137945	chr12:46256320-46256321	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
36	rs571823656	chr12:46256338-46256339	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
37	rs539205233	chr12:46256383-46256384	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
38	rs557504208	chr12:46256403-46256404	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
39	rs569354856	chr12:46256424-46256425	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
40	rs536670237	chr12:46256433-46256434	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
41	rs554945754	chr12:46256437-46256438	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
42	rs573095985	chr12:46256536-46256537	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
43	rs5797953	chr12:46256675-46256676	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
44	rs398116404	chr12:46256685-46256686	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
45	rs540528733	chr12:46256704-46256705	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
46	rs558524789	chr12:46256720-46256721	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
47	rs576991777	chr12:46256738-46256739	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
48	rs543970551	chr12:46256780-46256781	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
49	rs562277755	chr12:46256809-46256810	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
50	rs529720320	chr12:46256846-46256847	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:64)

Disease	PMID	Source
Chronic lymphocytic leukemia	21546498	CNVD
Seminomas	18059402	CNVD
Wilms tumour	21544195	CNVD
Esophageal cancer	21851588	CNVD
Lung cancer	20668451	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Ewing''s sarcoma	21437220	CNVD
Testicular germ cell tumor	18059402	CNVD
Medulloblastoma	21979893	CNVD
Malaria	21533027	CNVD
Chronic lymphocytic leukemia	22228453	CNVD
Basal cell lymphoma	17053054	CNVD
Chronic lymphocytic leukemia	21670202	CNVD
Ewing''s sarcoma	17952124	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Autism	22495311	CNVD
Neurodevelopmental disorder	22521361	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Renal cell carcinoma	18194544	CNVD
Breast cancer	21949216	CNVD
Carcinoma ex pleomorphic adenoma	18828159	CNVD
Acute myeloid leukemia	16864856	CNVD
Cancer	21637783	CNVD
Glioblastoma multiforme	21080181	CNVD
Renal cell carcinoma	19461508	CNVD
Burkitt''s lymphoma	18698080	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	21264507	CNVD
Glioblastoma multiforme	19960244	CNVD
Gastrointestinal stromal cancer	20470368	CNVD
Adenoid cystic carcinoma	17372589	CNVD
Hirschsprung''s Disease	21712996	CNVD
Lissencephaly	21572526	CNVD
Lung cancer	18438408	CNVD
small cell lung cancer	20016488	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Adenoid cystic carcinoma	18698036	CNVD
Breast cancer	19602461	CNVD
Breast cancer	17899364	CNVD
Colorectal cancer	16272173	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
Adenoid cystic carcinoma	18332873	CNVD
Breast cancer	21364760	CNVD
Prostate cancer	18632612	CNVD
Gastric cancer	18160780	CNVD
Myelofibrosis	22110671	CNVD
Follicular lymphoma	20505157	CNVD
Hepatocellular carcinoma	16750200	CNVD
Melanoma	18172304	CNVD
Metanephric adenoma	20802469	CNVD
Glioblastoma multiforme	17387387	CNVD
liposarcomas	17372913	CNVD
Non-small cell lung cancer	24170126	CNVD
Cancer	16751803	CNVD
Hodgkin''s lymphoma	18641027	CNVD
Bladder cancer	21909424	CNVD
Acute lymphoblastic leukemia	21339820	CNVD

Chromatin state (count:1179 , 50 per page) page: 1 2 3 4 5 6 7 ... 24

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:46229800-46267800	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
2	chr12:46242200-46272000	Weak transcription	Stomach Mucosa	stomach
3	chr12:46245400-46272800	Weak transcription	NHDF-Ad	bronchial
4	chr12:46245400-46318600	Weak transcription	Small Intestine	intestine
5	chr12:46245600-46256200	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
6	chr12:46245600-46267600	Weak transcription	Aorta	Aorta
7	chr12:46245800-46255400	Weak transcription	Primary T helper naive cells from peripheral blood	blood
8	chr12:46245800-46271000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
9	chr12:46245800-46271600	Weak transcription	HUVEC	blood vessel
10	chr12:46245800-46272000	Weak transcription	iPS-15b Cell Line	embryonic stem cell
11	chr12:46246000-46256400	Weak transcription	Pancreatic Islets	Pancreatic Islet
12	chr12:46246000-46272600	Weak transcription	Fetal Heart	heart
13	chr12:46246000-46285400	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
14	chr12:46246200-46256200	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
15	chr12:46246200-46256200	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
16	chr12:46246200-46256600	Weak transcription	Colon Smooth Muscle	Colon
17	chr12:46246400-46255000	Weak transcription	K562	blood
18	chr12:46246400-46267600	Weak transcription	Brain Anterior Caudate	brain
19	chr12:46246400-46267600	Weak transcription	Fetal Brain Male	brain
20	chr12:46246400-46268600	Weak transcription	Colonic Mucosa	Colon
21	chr12:46246400-46268600	Weak transcription	Esophagus	oesophagus
22	chr12:46246600-46256200	Weak transcription	Brain Germinal Matrix	brain
23	chr12:46246600-46265800	Weak transcription	ES-I3 Cell Line	embryonic stem cell
24	chr12:46246600-46266000	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
25	chr12:46246600-46266400	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
26	chr12:46246600-46266600	Weak transcription	Primary T killer memory cells from peripheral blood	blood
27	chr12:46246600-46268600	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
28	chr12:46246600-46268600	Weak transcription	Placenta Amnion	Placenta Amnion
29	chr12:46246600-46268600	Weak transcription	Right Ventricle	heart
30	chr12:46246600-46274800	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
31	chr12:46246600-46285400	Weak transcription	NH-A	brain
32	chr12:46246600-46285600	Weak transcription	Skeletal Muscle Male	skeletal muscle
33	chr12:46246600-46286000	Weak transcription	HMEC	breast
34	chr12:46246800-46258600	Weak transcription	Brain Cingulate Gyrus	brain
35	chr12:46246800-46267600	Weak transcription	Brain Angular Gyrus	brain
36	chr12:46246800-46269000	Weak transcription	Osteobl	bone
37	chr12:46246800-46288000	Weak transcription	Muscle Satellite Cultured Cells	--
38	chr12:46247000-46255000	Weak transcription	Primary B cells from peripheral blood	blood
39	chr12:46247000-46261000	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
40	chr12:46247200-46257000	Weak transcription	Stomach Smooth Muscle	stomach
41	chr12:46247400-46266400	Weak transcription	Hela-S3	cervix
42	chr12:46247600-46255400	Weak transcription	Fetal Lung	lung
43	chr12:46247600-46258400	Weak transcription	Brain Inferior Temporal Lobe	brain
44	chr12:46247600-46262600	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
45	chr12:46247600-46267800	Weak transcription	Cortex derived primary cultured neurospheres	brain
46	chr12:46247800-46255200	Weak transcription	iPS-18 Cell Line	embryonic stem cell
47	chr12:46247800-46256200	Weak transcription	HSMMtube	muscle
48	chr12:46247800-46257600	Weak transcription	Adipose Nuclei	Adipose
49	chr12:46247800-46257600	Weak transcription	Ovary	ovary
50	chr12:46247800-46258600	Weak transcription	Brain Hippocampus Middle	brain

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links