Variant report

Variant nsv559021
Chromosome Location chr12:57338716-57381259
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:238 , 50 per page) page: 1 2 3 4 5
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:57335600-57349200 Weak transcription Stomach Smooth Muscle stomach
2 chr12:57336000-57341800 Weak transcription Ovary ovary
3 chr12:57336000-57347400 Weak transcription Skeletal Muscle Female skeletal muscle
4 chr12:57336000-57348400 Weak transcription Brain Angular Gyrus brain
5 chr12:57336200-57345600 Weak transcription Skeletal Muscle Male skeletal muscle
6 chr12:57336200-57347600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
7 chr12:57336400-57341800 Weak transcription Esophagus oesophagus
8 chr12:57336400-57351000 Weak transcription Breast Myoepithelial Primary Cells Breast
9 chr12:57337200-57342800 Weak transcription Liver Liver
10 chr12:57340600-57347000 Weak transcription Left Ventricle heart
11 chr12:57340800-57345400 Weak transcription Spleen Spleen
12 chr12:57341400-57342400 Enhancers HepG2 liver
13 chr12:57341400-57348400 Weak transcription Brain Hippocampus Middle brain
14 chr12:57341600-57342200 Enhancers K562 blood
15 chr12:57341800-57342000 ZNF genes & repeats Ovary ovary
16 chr12:57341800-57342200 Enhancers Esophagus oesophagus
17 chr12:57342000-57342400 Strong transcription Ovary ovary
18 chr12:57342200-57344000 Weak transcription Esophagus oesophagus
19 chr12:57342400-57343000 Weak transcription Ovary ovary
20 chr12:57342800-57343200 ZNF genes & repeats H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
21 chr12:57342800-57346400 Strong transcription Liver Liver
22 chr12:57343000-57343200 Strong transcription Ovary ovary
23 chr12:57343200-57344600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
24 chr12:57343200-57345400 Weak transcription Ovary ovary
25 chr12:57343400-57344200 Weak transcription Aorta Aorta
26 chr12:57344000-57344600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
27 chr12:57344200-57346600 Strong transcription Aorta Aorta
28 chr12:57344600-57349200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
29 chr12:57344800-57345000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
30 chr12:57345400-57345800 Strong transcription Ovary ovary
31 chr12:57345400-57346000 Strong transcription Spleen Spleen
32 chr12:57345600-57346000 Strong transcription Skeletal Muscle Male skeletal muscle
33 chr12:57345800-57350400 Weak transcription Ovary ovary
34 chr12:57346000-57346200 Weak transcription Spleen Spleen
35 chr12:57346000-57347800 Weak transcription Esophagus oesophagus
36 chr12:57346000-57354200 Weak transcription Skeletal Muscle Male skeletal muscle
37 chr12:57346200-57346600 Genic enhancers Spleen Spleen
38 chr12:57346400-57346600 ZNF genes & repeats H1 Cell Line embryonic stem cell
39 chr12:57346400-57347000 Genic enhancers Liver Liver
40 chr12:57346600-57347200 Weak transcription Spleen Spleen
41 chr12:57346600-57350400 Weak transcription Aorta Aorta
42 chr12:57347000-57349400 Transcr. at gene 5' and 3' Liver Liver
43 chr12:57347200-57347600 Enhancers Spleen Spleen
44 chr12:57347600-57348600 Weak transcription Spleen Spleen
45 chr12:57347800-57348200 Enhancers Esophagus oesophagus
46 chr12:57348200-57349400 Weak transcription Esophagus oesophagus
47 chr12:57348400-57350000 Enhancers Primary neutrophils fromperipheralblood blood
48 chr12:57348600-57350000 Enhancers Spleen Spleen
49 chr12:57349000-57349200 Bivalent/Poised TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
50 chr12:57349000-57349400 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived

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