Variant report
Variant | nsv559048 |
---|---|
Chromosome Location | chr12:59336737-59440659 |
allele | n/a |
Outlinks | Ensembl   UCSC |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr12:59328600-59337000 | Weak transcription | Gastric | stomach |
2 | chr12:59335200-59337400 | Enhancers | Fetal Intestine Small | intestine |
3 | chr12:59335400-59337400 | Enhancers | Rectal Mucosa Donor 31 | rectum |
4 | chr12:59335800-59337000 | Enhancers | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
5 | chr12:59336000-59337000 | Enhancers | HUVEC | blood vessel |
6 | chr12:59336400-59337400 | Enhancers | Stomach Mucosa | stomach |
7 | chr12:59336800-59337400 | Enhancers | Fetal Intestine Large | intestine |
8 | chr12:59337000-59337600 | Enhancers | Gastric | stomach |
9 | chr12:59340400-59342800 | ZNF genes & repeats | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
10 | chr12:59341000-59341200 | Enhancers | Sigmoid Colon | Sigmoid Colon |
11 | chr12:59341200-59345800 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
12 | chr12:59342400-59342600 | Enhancers | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
13 | chr12:59342400-59342800 | ZNF genes & repeats | HUES6 Cell Line | embryonic stem cell |
14 | chr12:59342600-59342800 | ZNF genes & repeats | ES-I3 Cell Line | embryonic stem cell |
15 | chr12:59342600-59344200 | Weak transcription | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
16 | chr12:59342800-59343000 | Weak transcription | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
17 | chr12:59342800-59343600 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
18 | chr12:59342800-59343600 | Weak transcription | HUES6 Cell Line | embryonic stem cell |
19 | chr12:59343000-59343600 | Active TSS | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
20 | chr12:59343400-59345000 | Active TSS | Rectal Mucosa Donor 29 | rectum |
21 | chr12:59343400-59345400 | Enhancers | Fetal Intestine Large | intestine |
22 | chr12:59343600-59343800 | Enhancers | HUES6 Cell Line | embryonic stem cell |
23 | chr12:59343600-59343800 | Enhancers | Duodenum Mucosa | Duodenum |
24 | chr12:59343600-59343800 | Enhancers | Rectal Mucosa Donor 31 | rectum |
25 | chr12:59343600-59344000 | Flanking Active TSS | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
26 | chr12:59343600-59344200 | Enhancers | iPS-20b Cell Line | embryonic stem cell |
27 | chr12:59343600-59345000 | Enhancers | ES-I3 Cell Line | embryonic stem cell |
28 | chr12:59343800-59344200 | Flanking Active TSS | HUES6 Cell Line | embryonic stem cell |
29 | chr12:59343800-59344200 | Enhancers | Esophagus | oesophagus |
30 | chr12:59343800-59344200 | Flanking Active TSS | Rectal Mucosa Donor 31 | rectum |
31 | chr12:59343800-59344400 | Enhancers | H1 Cell Line | embryonic stem cell |
32 | chr12:59343800-59344400 | Enhancers | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
33 | chr12:59343800-59345000 | Active TSS | Duodenum Mucosa | Duodenum |
34 | chr12:59344000-59344400 | Enhancers | iPS DF 19.11 Cell Line | embryonic stem cell |
35 | chr12:59344000-59344600 | Active TSS | ES-WA7 Cell Line | embryonic stem cell |
36 | chr12:59344000-59344600 | Enhancers | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
37 | chr12:59344000-59344600 | Enhancers | iPS-15b Cell Line | embryonic stem cell |
38 | chr12:59344000-59344600 | Enhancers | Placenta | Placenta |
39 | chr12:59344000-59344600 | Active TSS | HepG2 | liver |
40 | chr12:59344000-59345000 | Enhancers | ES-UCSF4 Cell Line | embryonic stem cell |
41 | chr12:59344200-59344800 | Enhancers | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
42 | chr12:59344200-59344800 | Active TSS | Rectal Mucosa Donor 31 | rectum |
43 | chr12:59344200-59345000 | Enhancers | HUES6 Cell Line | embryonic stem cell |
44 | chr12:59344400-59344600 | Active TSS | Fetal Intestine Small | intestine |
45 | chr12:59344400-59347200 | Weak transcription | H1 Cell Line | embryonic stem cell |
46 | chr12:59344600-59344800 | Active TSS | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
47 | chr12:59344600-59344800 | Flanking Active TSS | Fetal Intestine Small | intestine |
48 | chr12:59344600-59345000 | Enhancers | HUES48 Cell Line | embryonic stem cell |
49 | chr12:59344600-59355000 | Weak transcription | iPS-15b Cell Line | embryonic stem cell |
50 | chr12:59344800-59345000 | Flanking Active TSS | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |