Variant report

Variant nsv559049
Chromosome Location chr12:59359937-59436179
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:332 , 50 per page) page: 1 2 3 4 5 6 7
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:59356000-59364000 Weak transcription ES-I3 Cell Line embryonic stem cell
2 chr12:59356600-59360600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
3 chr12:59360600-59361000 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
4 chr12:59360600-59361000 Enhancers A549 lung
5 chr12:59360600-59361000 Enhancers HSMMtube muscle
6 chr12:59360600-59361200 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
7 chr12:59360600-59361600 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
8 chr12:59360600-59361800 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
9 chr12:59360600-59361800 Enhancers NHDF-Ad bronchial
10 chr12:59360800-59361000 Enhancers Fetal Adrenal Gland Adrenal Gland
11 chr12:59360800-59361200 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
12 chr12:59360800-59361800 Enhancers Muscle Satellite Cultured Cells --
13 chr12:59361200-59361400 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
14 chr12:59361200-59361600 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
15 chr12:59361200-59361600 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
16 chr12:59361200-59361600 Enhancers Fetal Brain Male brain
17 chr12:59361200-59361800 Enhancers Fetal Brain Female brain
18 chr12:59361200-59361800 Enhancers NHEK skin
19 chr12:59361400-59361600 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
20 chr12:59361400-59362000 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
21 chr12:59361600-59362000 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
22 chr12:59361600-59362600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
23 chr12:59361800-59362800 Weak transcription NHDF-Ad bronchial
24 chr12:59362600-59363400 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
25 chr12:59362800-59363000 Enhancers NHDF-Ad bronchial
26 chr12:59362800-59363800 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
27 chr12:59363400-59364200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
28 chr12:59364000-59364800 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
29 chr12:59364200-59365400 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
30 chr12:59369600-59370200 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
31 chr12:59369800-59370200 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
32 chr12:59369800-59370200 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
33 chr12:59370200-59373400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
34 chr12:59373400-59373600 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
35 chr12:59375800-59377800 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
36 chr12:59377600-59378200 Enhancers Brain Germinal Matrix brain
37 chr12:59377800-59381200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
38 chr12:59378000-59378400 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
39 chr12:59379400-59379600 Active TSS Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
40 chr12:59379600-59381400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
41 chr12:59381200-59382200 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
42 chr12:59381400-59382600 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
43 chr12:59382200-59383200 Enhancers HUVEC blood vessel
44 chr12:59382600-59391000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
45 chr12:59396400-59396600 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
46 chr12:59397800-59398000 Enhancers NHDF-Ad bronchial
47 chr12:59398000-59398200 Flanking Active TSS NHDF-Ad bronchial
48 chr12:59398000-59398600 Active TSS Pancreatic Islets Pancreatic Islet
49 chr12:59398200-59398400 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
50 chr12:59398200-59398400 Active TSS Foreskin Fibroblast Primary Cells skin01 Skin

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