Variant report

Variant	nsv559052
Chromosome Location	chr12:59532203-59809256
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr12:59543814-59544172	HepG2	liver:	n/a	n/a
2	ARID3A	chr12:59558954-59559259	HepG2	liver:	n/a	n/a
3	ARID3A	chr12:59797100-59797444	HepG2	liver:	n/a	chr12:59797314-59797330
4	ATF2	chr12:59712703-59713078	H1-hESC	embryonic stem cell:	n/a	n/a
5	ATF2	chr12:59715232-59716577	H1-hESC	embryonic stem cell:	n/a	n/a
6	ATF2	chr12:59711326-59712140	H1-hESC	embryonic stem cell:	n/a	n/a
7	BACH1	chr12:59584739-59584963	H1-hESC	embryonic stem cell:	n/a	chr12:59584811-59584825
8	BACH1	chr12:59580337-59580620	H1-hESC	embryonic stem cell:	n/a	n/a
9	BACH1	chr12:59596104-59596133	H1-hESC	embryonic stem cell:	n/a	n/a
10	BACH1	chr12:59676806-59677328	H1-hESC	embryonic stem cell:	n/a	n/a
11	BCLAF1	chr12:59797005-59797347	GM12878	blood:	n/a	n/a
12	BHLHE40	chr12:59801689-59801776	GM12878	blood:	n/a	chr12:59801704-59801713
13	BRCA1	chr12:59776889-59777702	Hela-S3	cervix:	n/a	n/a
14	BRCA1	chr12:59688446-59688498	Hela-S3	cervix:	n/a	n/a
15	BRCA1	chr12:59543816-59544153	Hela-S3	cervix:	n/a	n/a
16	BRCA1	chr12:59769331-59769379	GM12878	blood:	n/a	n/a
17	BRCA1	chr12:59543796-59544135	H1-hESC	embryonic stem cell:	n/a	n/a
18	BRCA1	chr12:59771063-59771145	H1-hESC	embryonic stem cell:	n/a	n/a
19	CBX3	chr12:59543727-59544292	HCT-116	colon:	n/a	n/a
20	CEBPB	chr12:59769415-59769842	ECC-1	luminal epithelium:	n/a	chr12:59769607-59769618
21	CEBPB	chr12:59797055-59797619	H1-hESC	embryonic stem cell:	n/a	chr12:59797254-59797265 chr12:59797159-59797172 chr12:59797254-59797267 chr12:59797159-59797172
22	CEBPB	chr12:59805257-59805515	A549	lung:	n/a	chr12:59805398-59805411 chr12:59805398-59805411 chr12:59805398-59805409 chr12:59805398-59805409
23	CEBPB	chr12:59769435-59769763	K562	blood:	n/a	chr12:59769607-59769618
24	CEBPB	chr12:59715120-59715444	H1-hESC	embryonic stem cell:	n/a	chr12:59715258-59715269 chr12:59715259-59715270
25	CEBPB	chr12:59769465-59769755	A549	lung:	n/a	chr12:59769607-59769618
26	CEBPB	chr12:59795805-59796116	IMR90	lung:	n/a	chr12:59795959-59795970 chr12:59795961-59795972 chr12:59795961-59795970
27	CEBPB	chr12:59630081-59630280	K562	blood:	n/a	chr12:59630176-59630187
28	CEBPB	chr12:59798038-59798403	Hela-S3	cervix:	n/a	chr12:59798181-59798194 chr12:59798163-59798174 chr12:59798046-59798059 chr12:59798161-59798172
29	CEBPB	chr12:59711472-59711762	H1-hESC	embryonic stem cell:	n/a	n/a
30	CEBPB	chr12:59769532-59769728	MCF-7	breast:	n/a	chr12:59769607-59769618
31	CEBPB	chr12:59795810-59796129	HepG2	liver:	n/a	chr12:59795959-59795970 chr12:59795961-59795972 chr12:59795961-59795970
32	CEBPB	chr12:59590775-59591118	MCF-7	breast:	n/a	n/a
33	CEBPB	chr12:59769408-59769782	ECC-1	luminal epithelium:	n/a	chr12:59769607-59769618
34	CEBPB	chr12:59549372-59549509	A549	lung:	n/a	chr12:59549411-59549422 chr12:59549409-59549422
35	CEBPB	chr12:59798031-59798283	K562	blood:	n/a	chr12:59798181-59798194 chr12:59798163-59798174 chr12:59798046-59798059 chr12:59798161-59798172
36	CEBPB	chr12:59777033-59777542	IMR90	lung:	n/a	chr12:59777322-59777335 chr12:59777324-59777333 chr12:59777324-59777333 chr12:59777322-59777333 chr12:59777340-59777353 chr12:59777322-59777335 chr12:59777324-59777333 chr12:59777324-59777333 chr12:59777341-59777352 chr12:59777323-59777334
37	CEBPB	chr12:59556826-59557109	IMR90	lung:	n/a	n/a
38	CEBPB	chr12:59601766-59602100	HepG2	liver:	n/a	chr12:59601915-59601926 chr12:59601947-59601958
39	CEBPB	chr12:59588614-59588899	H1-hESC	embryonic stem cell:	n/a	n/a
40	CEBPB	chr12:59551959-59552180	H1-hESC	embryonic stem cell:	n/a	n/a
41	CEBPB	chr12:59715106-59715383	HepG2	liver:	n/a	chr12:59715258-59715269 chr12:59715259-59715270
42	CEBPB	chr12:59626604-59626900	A549	lung:	n/a	chr12:59626734-59626745
43	CEBPB	chr12:59676742-59677102	Hela-S3	cervix:	n/a	n/a
44	CEBPB	chr12:59797047-59797555	HepG2	liver:	n/a	chr12:59797254-59797265 chr12:59797159-59797172 chr12:59797254-59797267 chr12:59797159-59797172
45	CEBPB	chr12:59777209-59777438	H1-hESC	embryonic stem cell:	n/a	chr12:59777322-59777335 chr12:59777324-59777333 chr12:59777324-59777333 chr12:59777322-59777333 chr12:59777340-59777353 chr12:59777322-59777335 chr12:59777324-59777333 chr12:59777324-59777333 chr12:59777341-59777352 chr12:59777323-59777334
46	CEBPB	chr12:59630066-59630325	IMR90	lung:	n/a	chr12:59630176-59630187
47	CEBPB	chr12:59795829-59796135	A549	lung:	n/a	chr12:59795959-59795970 chr12:59795961-59795972 chr12:59795961-59795970
48	CEBPB	chr12:59556889-59557091	A549	lung:	n/a	n/a
49	CEBPB	chr12:59601870-59602048	K562	blood:	n/a	chr12:59601915-59601926 chr12:59601947-59601958
50	CEBPB	chr12:59626627-59626941	HepG2	liver:	n/a	chr12:59626734-59626745

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr12:59730539-59730589	NB4	blood:	n/a
2	chr12:59730539-59730589	NB4	blood:	n/a
3	chr12:59676888-59676938	NHDF-neo	bronchial:	n/a
4	chr12:59721694-59721744	Jurkat	blood:	n/a
5	chr12:59797287-59797337	HPAEpiC	pulmonary alveolar:	n/a
6	chr12:59676888-59676938	AG09309	skin:	n/a
7	chr12:59721694-59721744	GM12892	blood:	n/a
8	chr12:59721694-59721744	HRE	kidney:	n/a
9	chr12:59797287-59797337	GM12878	blood:	n/a
10	chr12:59721694-59721744	HNPCEpiC	eye:	n/a
11	chr12:59715992-59716042	U87	brain:	n/a
12	chr12:59730539-59730589	HNPCEpiC	eye:	n/a
13	chr12:59730539-59730589	GM12878	blood:	n/a
14	chr12:59715992-59716042	CMK	blood:	n/a
15	chr12:59715992-59716042	LNCaP	prostate:	n/a
16	chr12:59730539-59730589	AG10803	skin:	n/a
17	chr12:59715992-59716042	RPTEC	kidney:	n/a
18	chr12:59721694-59721744	HMEC	breast:	n/a
19	chr12:59797287-59797337	NT2-D1	testis:	n/a
20	chr12:59730539-59730589	HRCEpiC	kidney:	n/a
21	chr12:59797287-59797337	PrEC	prostate:	n/a
22	chr12:59730539-59730589	ovcar-3	ovarian:	n/a
23	chr12:59797287-59797337	GM12891	blood:	n/a
24	chr12:59730539-59730589	AG09319	gingival:	n/a
25	chr12:59721694-59721744	Hepatocyte	liver:	n/a
26	chr12:59730539-59730589	HEEpiC	esophagus:	n/a
27	chr12:59797287-59797337	HNPCEpiC	eye:	n/a
28	chr12:59797287-59797337	NB4	blood:	n/a
29	chr12:59715992-59716042	BJ	skin:	n/a
30	chr12:59676888-59676938	HCM	heart:	n/a
31	chr12:59721694-59721744	AG04450	lung:	fetal
32	chr12:59730539-59730589	HCT-116	colon:	n/a
33	chr12:59730539-59730589	IMR90	lung:	fetal
34	chr12:59721694-59721744	GM06990	blood:	n/a
35	chr12:59715992-59716042	AG10803	skin:	n/a
36	chr12:59676888-59676938	HMEC	breast:	n/a
37	chr12:59730539-59730589	U87	brain:	n/a
38	chr12:59676888-59676938	AG09319	gingival:	n/a
39	chr12:59715992-59716042	AoSMC	blood vessel:	n/a
40	chr12:59676888-59676938	SKMC	muscle:	n/a
41	chr12:59676888-59676938	BJ	skin:	n/a
42	chr12:59676888-59676938	SK-N-SH_RA	brain:	n/a
43	chr12:59797287-59797337	HL-60	blood:	n/a
44	chr12:59721694-59721744	HRPEpiC	eye:	n/a
45	chr12:59721694-59721744	ovcar-3	ovarian:	n/a
46	chr12:59715992-59716042	NHBE	bronchial:	n/a
47	chr12:59797287-59797337	T-47D	breast:	n/a
48	chr12:59676888-59676938	HCPEpiC	choroid plexus:	n/a
49	chr12:59797287-59797337	PFSK-1	brain:	n/a
50	chr12:59676888-59676938	RPTEC	kidney:	n/a

No.	Distal block	Cell Line	Cell type
1	chr12:59586597..59588701-chr12:59589774..59591287,2	MCF-7	breast:
2	chr12:59507234..59507853-chr12:59766386..59767199,2	MCF-7	breast:
3	chr12:59506527..59507272-chr12:59543925..59544447,2	MCF-7	breast:
4	chr12:59655684..59657205-chr12:59659679..59661187,2	MCF-7	breast:
5	chr12:59673431..59675592-chr12:59677210..59679968,2	MCF-7	breast:
6	chr12:59692138..59694777-chr12:59713415..59715358,2	MCF-7	breast:
7	chr12:59507585..59508107-chr12:59766521..59767200,2	MCF-7	breast:
8	chr12:58809849..58810654-chr12:59543572..59544140,2	MCF-7	breast:
9	chr12:58739967..58740565-chr12:59543543..59544432,2	K562	blood:
10	chr12:59653805..59656189-chr12:59672943..59675327,2	MCF-7	breast:
11	chr12:59764978..59768337-chr12:59768399..59771459,3	MCF-7	breast:
12	chr12:59653805..59656189-chr12:59672943..59675327,2	MCF-7	breast:
13	chr12:59586597..59588701-chr12:59589774..59591287,2	MCF-7	breast:
14	chr12:59692138..59694777-chr12:59713415..59715358,2	MCF-7	breast:
15	chr12:59537940..59539473-chr12:59543587..59545089,2	MCF-7	breast:
16	chr12:59673431..59675592-chr12:59677210..59679968,2	MCF-7	breast:
17	chr12:59507468..59508144-chr12:59801341..59801884,3	MCF-7	breast:
18	chr12:59567506..59568224-chr12:59739584..59740478,2	MCF-7	breast:
19	chr12:59655684..59657205-chr12:59659679..59661187,2	MCF-7	breast:
20	chr12:58934010..58934928-chr12:59543596..59544503,6	MCF-7	breast:
21	chr12:59507135..59508358-chr12:59543262..59544671,18	MCF-7	breast:
22	chr12:59543592..59544432-chr12:59558545..59559537,3	MCF-7	breast:
23	chr12:59227394..59228307-chr12:59543616..59544500,4	MCF-7	breast:
24	chr12:58739581..58740441-chr12:59543579..59544208,2	MCF-7	breast:
25	chr12:59543700..59544432-chr20:52816306..52816814,2	MCF-7	breast:
26	chr12:59774582..59777442-chr12:59779741..59781913,2	K562	blood:
27	chr12:59567188..59568180-chr12:59766489..59767406,3	MCF-7	breast:
28	chr12:59507415..59508147-chr12:59543545..59544473,6	MCF-7	breast:
29	chr12:59577181..59579768-chr12:59589219..59591001,2	MCF-7	breast:
30	chr12:59796807..59797458-chr12:60228606..60229339,3	MCF-7	breast:
31	chr12:59802183..59802836-chr20:52395505..52396391,2	MCF-7	breast:
32	chr12:59764978..59768337-chr12:59768399..59771459,3	MCF-7	breast:
33	chr12:59543592..59544432-chr12:59558545..59559537,3	MCF-7	breast:
34	chr12:59567188..59568180-chr12:59766489..59767406,3	MCF-7	breast:
35	chr12:59537940..59539473-chr12:59543587..59545089,2	MCF-7	breast:
36	chr12:59567506..59568224-chr12:59739584..59740478,2	MCF-7	breast:
37	chr12:59577181..59579768-chr12:59589219..59591001,2	MCF-7	breast:
38	chr12:59774582..59777442-chr12:59779741..59781913,2	K562	blood:
39	chr12:58934331..58934849-chr12:59544859..59545828,2	MCF-7	breast:

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-RP11-272B17.2.1-1	chr12:59796972-59797091	ENSG00000258214
2	lnc-RP11-272B17.2.1-1	chr12:59804912-59804952	ENSG00000258214
3	lnc-SLC16A7-4	chr12:59712962-59714552	NONHSAT029042
4	lnc-RP11-272B17.2.1-1	chr12:59796410-59796544	ENSG00000258214
5	lnc-SLC16A7-4	chr12:59714688-59717255	NONHSAT029042
6	lnc-RP11-272B17.2.1-1	chr12:59759999-59760050	ENSG00000258214

Variant related genes	Relation type
RNU6-279P	TF binding region
ENSG00000258214	TF binding region
RNU6-279P	CpG island
ENSG00000258214	CpG island

Extended variants
information (count: 6321 )
Associated
traits (count: 86 )

Variant overlapped rSNPs/rCNVs (count:6321 , 50 per page) page: 1 2 3 4 5 6 7 ... 127

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs370781766	chr12:59534436-59534437	Enhancers	n/a	n/a	Overlapped CNVs	n/a
2	rs545170493	chr12:59534493-59534494	Enhancers	n/a	n/a	Overlapped CNVs	n/a
3	rs541399382	chr12:59534497-59534498	Enhancers	n/a	n/a	Overlapped CNVs	n/a
4	rs7309217	chr12:59534554-59534555	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
5	rs554587140	chr12:59534581-59534582	Enhancers	n/a	n/a	Overlapped CNVs	n/a
6	rs562843929	chr12:59534809-59534810	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs113731363	chr12:59534835-59534836	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs564957539	chr12:59534857-59534858	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs184523220	chr12:59534981-59534982	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs111385399	chr12:59535002-59535003	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs545209821	chr12:59535052-59535053	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs142349931	chr12:59535053-59535054	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs560182740	chr12:59535078-59535079	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs7296716	chr12:59535089-59535090	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs572358325	chr12:59535110-59535111	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs561373328	chr12:59535138-59535139	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs531503393	chr12:59535315-59535316	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs138995269	chr12:59535319-59535320	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs189235156	chr12:59535356-59535357	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs17553430	chr12:59535418-59535419	Enhancers Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
21	rs547640940	chr12:59535423-59535424	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs75982756	chr12:59535455-59535456	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs369169105	chr12:59535488-59535489	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs374737480	chr12:59535495-59535496	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs116571324	chr12:59535501-59535502	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs554267453	chr12:59535524-59535525	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs575948567	chr12:59535530-59535531	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs1515905	chr12:59535555-59535556	Enhancers Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
29	rs556402361	chr12:59535574-59535575	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs141531286	chr12:59535616-59535617	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs17629213	chr12:59535618-59535619	Enhancers Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
32	rs1515904	chr12:59535636-59535637	Enhancers Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
33	rs567422592	chr12:59535642-59535643	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs111999766	chr12:59535669-59535670	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs529928996	chr12:59535730-59535731	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs550032946	chr12:59535762-59535763	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs369297223	chr12:59535849-59535850	Enhancers	n/a	n/a	Overlapped CNVs	n/a
38	rs543540427	chr12:59535850-59535851	Enhancers	n/a	n/a	Overlapped CNVs	n/a
39	rs111460976	chr12:59535871-59535872	Enhancers	n/a	n/a	Overlapped CNVs	n/a
40	rs561236638	chr12:59535883-59535884	Enhancers	n/a	n/a	Overlapped CNVs	n/a
41	rs75641741	chr12:59535960-59535961	Enhancers	n/a	n/a	Overlapped CNVs	n/a
42	rs543861315	chr12:59535983-59535984	Enhancers	n/a	n/a	Overlapped CNVs	n/a
43	rs185384845	chr12:59536053-59536054	Enhancers	n/a	n/a	Overlapped CNVs	n/a
44	rs532486244	chr12:59536063-59536064	Enhancers	n/a	n/a	Overlapped CNVs	n/a
45	rs547606795	chr12:59536087-59536088	Enhancers	n/a	n/a	Overlapped CNVs	n/a
46	rs190693051	chr12:59536088-59536089	Enhancers	n/a	n/a	Overlapped CNVs	n/a
47	rs559953042	chr12:59536204-59536205	Enhancers	n/a	n/a	Overlapped CNVs	n/a
48	rs529854396	chr12:59536227-59536228	Enhancers	n/a	n/a	Overlapped CNVs	n/a
49	rs548224971	chr12:59536241-59536242	Enhancers	n/a	n/a	Overlapped CNVs	n/a
50	rs530637953	chr12:59536259-59536260	Enhancers	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:86)

Disease	PMID	Source
Wilms tumour	21544195	CNVD
Esophageal cancer	21851588	CNVD
Lung cancer	20668451	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Ewing''s sarcoma	21437220	CNVD
Testicular germ cell tumor	18059402	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Medulloblastoma	21979893	CNVD
Malaria	21533027	CNVD
Chronic lymphocytic leukemia	22228453	CNVD
Basal cell lymphoma	17053054	CNVD
Chronic lymphocytic leukemia	21670202	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Autism	22495311	CNVD
Neurodevelopmental disorder	22521361	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Renal cell carcinoma	18194544	CNVD
Breast cancer	21949216	CNVD
Carcinoma ex pleomorphic adenoma	18828159	CNVD
Acute myeloid leukemia	16864856	CNVD
Cancer	21637783	CNVD
Glioblastoma multiforme	21080181	CNVD
Renal cell carcinoma	19461508	CNVD
Burkitt''s lymphoma	18698080	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	21264507	CNVD
Glioblastoma multiforme	19960244	CNVD
Gastrointestinal stromal cancer	20470368	CNVD
Adenoid cystic carcinoma	17372589	CNVD
Lissencephaly	21572526	CNVD
Lung cancer	18438408	CNVD
Breast cancer	19602461	CNVD
Breast cancer	17899364	CNVD
Colorectal cancer	16272173	CNVD
Prostate cancer	18632612	CNVD
Metanephric adenoma	20802469	CNVD
Glioblastoma multiforme	17387387	CNVD
liposarcomas	17372913	CNVD
Non-small cell lung cancer	24170126	CNVD
Cancer	16751803	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Breast cancer	21785460	CNVD
small cell lung cancer	20016488	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
Hodgkin''s lymphoma	18179710	CNVD
Urothelial cell carcinoma	18451213	CNVD
Melanoma	18172304	CNVD
Glioblastoma multiforme	21390271	CNVD
Cancer	20164919	CNVD
Leukemia	18628472	CNVD
Glioblastoma multiforme	22291905	CNVD
Glioblastoma multiforme	19435819	CNVD
Myelofibrosis	22110671	CNVD
Phyllodes tumor	17334353	CNVD
Glaucoma	21310917	CNVD
Breast cancer	16272173	CNVD
Mental retardation	19951919	CNVD
Glaucoma	21447600	CNVD
Non-syndromic sensorineural hearing loss	15273396	CNVD
Developmental delay	21267005	CNVD
12q14 microdeletion syndrome	21267005	CNVD
Developmental delay	19277063	CNVD
Dwarfism	19277063	CNVD
Fibroblasts	20926602	CNVD
Follicular lymphoma	18703704	CNVD
Acute myeloid leukemia	21251322	CNVD
Glioblastoma multiforme	20080666	CNVD
Medulloblastoma	19270706	CNVD
Breast cancer	17133270	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Gastrointestinal stromal cancer	20877625	CNVD
Glioblastoma	17090523	CNVD
Multiple myeloma	16616336	CNVD
Lung cancer	16773561	CNVD
Primary mediastinal b-cell lymphoma	17728785	CNVD
Breast cancer	21364760	CNVD
Chronic lymphocytic leukemia	21215367	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD
Osteosarcoma	21215367	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD

Chromatin state (count:664 , 50 per page) page: 1 2 3 4 5 6 7 ... 14

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:59534400-59534600	Enhancers	Fetal Lung	lung
2	chr12:59534800-59535800	Weak transcription	Fetal Lung	lung
3	chr12:59535400-59536600	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
4	chr12:59535800-59536600	Enhancers	Fetal Lung	lung
5	chr12:59536000-59537200	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
6	chr12:59536000-59537600	Enhancers	NHDF-Ad	bronchial
7	chr12:59536200-59536600	Enhancers	Cortex derived primary cultured neurospheres	brain
8	chr12:59536200-59536600	Enhancers	Brain Anterior Caudate	brain
9	chr12:59536200-59536600	Enhancers	Brain Substantia Nigra	brain
10	chr12:59536200-59536600	Enhancers	Pancreas	Pancrea
11	chr12:59536200-59536800	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
12	chr12:59536400-59536600	Enhancers	Left Ventricle	heart
13	chr12:59538000-59538600	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
14	chr12:59538000-59543200	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
15	chr12:59538600-59538800	Flanking Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
16	chr12:59543200-59543400	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
17	chr12:59543800-59544600	Enhancers	NHDF-Ad	bronchial
18	chr12:59544200-59545600	Enhancers	NHLF	lung
19	chr12:59544200-59545800	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
20	chr12:59544400-59544800	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
21	chr12:59544400-59546000	Enhancers	HSMM	muscle
22	chr12:59544600-59545400	Weak transcription	NHDF-Ad	bronchial
23	chr12:59544800-59545800	Enhancers	Osteobl	bone
24	chr12:59545000-59545400	Enhancers	Muscle Satellite Cultured Cells	--
25	chr12:59545200-59545800	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
26	chr12:59545400-59545600	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
27	chr12:59545400-59545600	Enhancers	NHDF-Ad	bronchial
28	chr12:59545400-59546000	Enhancers	Aorta	Aorta
29	chr12:59546600-59548000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
30	chr12:59546800-59551200	ZNF genes & repeats	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
31	chr12:59548000-59548400	ZNF genes & repeats	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
32	chr12:59548400-59549000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
33	chr12:59549200-59549400	ZNF genes & repeats	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
34	chr12:59550400-59551200	Weak transcription	H1 Cell Line	embryonic stem cell
35	chr12:59550800-59551000	ZNF genes & repeats	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
36	chr12:59551000-59557600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
37	chr12:59552000-59552600	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
38	chr12:59552400-59552600	Enhancers	H1 Cell Line	embryonic stem cell
39	chr12:59557400-59559000	Enhancers	NH-A	brain
40	chr12:59557600-59559000	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
41	chr12:59558200-59558600	Enhancers	Placenta Amnion	Placenta Amnion
42	chr12:59558600-59558800	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
43	chr12:59558600-59559000	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
44	chr12:59558600-59559000	Enhancers	Osteobl	bone
45	chr12:59558800-59559000	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
46	chr12:59558800-59559000	Flanking Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
47	chr12:59559000-59560600	Weak transcription	NH-A	brain
48	chr12:59559200-59561200	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
49	chr12:59559600-59562000	Enhancers	Fetal Intestine Small	intestine
50	chr12:59559600-59562800	Enhancers	Fetal Intestine Large	intestine

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