Variant report
Variant | nsv559206 |
---|---|
Chromosome Location | chr12:66854354-66950289 |
allele | n/a |
Outlinks | Ensembl   UCSC |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr12:66823200-66859000 | Weak transcription | Brain Germinal Matrix | brain |
2 | chr12:66836200-66856600 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
3 | chr12:66836400-66855200 | Weak transcription | Placenta | Placenta |
4 | chr12:66838800-66858400 | Weak transcription | Fetal Brain Female | brain |
5 | chr12:66843800-66857200 | Weak transcription | HMEC | breast |
6 | chr12:66844000-66861600 | Weak transcription | Primary T cells from cord blood | blood |
7 | chr12:66846800-66860200 | Weak transcription | Colon Smooth Muscle | Colon |
8 | chr12:66849400-66866400 | Weak transcription | Pancreas | Pancrea |
9 | chr12:66849600-66860000 | Weak transcription | Esophagus | oesophagus |
10 | chr12:66851600-66857600 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
11 | chr12:66853000-66876200 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
12 | chr12:66855200-66855400 | Enhancers | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
13 | chr12:66855200-66856200 | Strong transcription | Placenta | Placenta |
14 | chr12:66855400-66857600 | Weak transcription | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
15 | chr12:66856200-66857800 | Weak transcription | Placenta | Placenta |
16 | chr12:66856600-66856800 | ZNF genes & repeats | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
17 | chr12:66856800-66859600 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
18 | chr12:66856800-66868400 | Weak transcription | Pancreatic Islets | Pancreatic Islet |
19 | chr12:66857600-66858000 | Enhancers | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
20 | chr12:66858000-66860000 | Weak transcription | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
21 | chr12:66860000-66860200 | Enhancers | Esophagus | oesophagus |
22 | chr12:66860200-66868400 | Weak transcription | Esophagus | oesophagus |
23 | chr12:66860400-66861200 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
24 | chr12:66866400-66866600 | Enhancers | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
25 | chr12:66866400-66866600 | Enhancers | Gastric | stomach |
26 | chr12:66866400-66867200 | ZNF genes & repeats | Pancreas | Pancrea |
27 | chr12:66866600-66868400 | Weak transcription | Gastric | stomach |
28 | chr12:66867000-66867200 | Enhancers | iPS-15b Cell Line | embryonic stem cell |
29 | chr12:66867000-66868400 | Weak transcription | Right Atrium | heart |
30 | chr12:66867200-66868400 | Weak transcription | iPS-15b Cell Line | embryonic stem cell |
31 | chr12:66867200-66868400 | Weak transcription | Pancreas | Pancrea |
32 | chr12:66867800-66868200 | Weak transcription | Fetal Adrenal Gland | Adrenal Gland |
33 | chr12:66868400-66868600 | ZNF genes & repeats | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
34 | chr12:66868400-66868600 | ZNF genes & repeats | H9 Cell Line | embryonic stem cell |
35 | chr12:66868400-66868600 | Enhancers | H9 Derived Neuron Cultured Cells | ES cell derived |
36 | chr12:66868400-66868600 | ZNF genes & repeats | iPS-15b Cell Line | embryonic stem cell |
37 | chr12:66868400-66868600 | ZNF genes & repeats | iPS-18 Cell Line | embryonic stem cell |
38 | chr12:66868400-66868600 | ZNF genes & repeats | iPS-20b Cell Line | embryonic stem cell |
39 | chr12:66868400-66868600 | ZNF genes & repeats | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
40 | chr12:66868400-66868600 | ZNF genes & repeats | Primary hematopoietic stem cells short term culture | blood |
41 | chr12:66868400-66868600 | ZNF genes & repeats | Primary T helper naive cells fromperipheralblood | blood |
42 | chr12:66868400-66868600 | Flanking Bivalent TSS/Enh | Primary T helper 17 cells PMA-I stimulated | -- |
43 | chr12:66868400-66868600 | ZNF genes & repeats | Primary T helper cells fromperipheralblood | blood |
44 | chr12:66868400-66868600 | Bivalent Enhancer | Primary T regulatory cells fromperipheralblood | blood |
45 | chr12:66868400-66868600 | Bivalent Enhancer | Primary T cells effector/memory enriched fromperipheralblood | blood |
46 | chr12:66868400-66868600 | Flanking Bivalent TSS/Enh | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
47 | chr12:66868400-66868600 | ZNF genes & repeats | Adipose Nuclei | Adipose |
48 | chr12:66868400-66868600 | Flanking Bivalent TSS/Enh | Liver | Liver |
49 | chr12:66868400-66868600 | Flanking Bivalent TSS/Enh | Brain Cingulate Gyrus | brain |
50 | chr12:66868400-66868600 | ZNF genes & repeats | Brain Hippocampus Middle | brain |