Variant report

Variant nsv559206
Chromosome Location chr12:66854354-66950289
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:375 , 50 per page) page: 1 2 3 4 5 6 7 8
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:66823200-66859000 Weak transcription Brain Germinal Matrix brain
2 chr12:66836200-66856600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
3 chr12:66836400-66855200 Weak transcription Placenta Placenta
4 chr12:66838800-66858400 Weak transcription Fetal Brain Female brain
5 chr12:66843800-66857200 Weak transcription HMEC breast
6 chr12:66844000-66861600 Weak transcription Primary T cells from cord blood blood
7 chr12:66846800-66860200 Weak transcription Colon Smooth Muscle Colon
8 chr12:66849400-66866400 Weak transcription Pancreas Pancrea
9 chr12:66849600-66860000 Weak transcription Esophagus oesophagus
10 chr12:66851600-66857600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
11 chr12:66853000-66876200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
12 chr12:66855200-66855400 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
13 chr12:66855200-66856200 Strong transcription Placenta Placenta
14 chr12:66855400-66857600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
15 chr12:66856200-66857800 Weak transcription Placenta Placenta
16 chr12:66856600-66856800 ZNF genes & repeats H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
17 chr12:66856800-66859600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
18 chr12:66856800-66868400 Weak transcription Pancreatic Islets Pancreatic Islet
19 chr12:66857600-66858000 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
20 chr12:66858000-66860000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
21 chr12:66860000-66860200 Enhancers Esophagus oesophagus
22 chr12:66860200-66868400 Weak transcription Esophagus oesophagus
23 chr12:66860400-66861200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
24 chr12:66866400-66866600 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
25 chr12:66866400-66866600 Enhancers Gastric stomach
26 chr12:66866400-66867200 ZNF genes & repeats Pancreas Pancrea
27 chr12:66866600-66868400 Weak transcription Gastric stomach
28 chr12:66867000-66867200 Enhancers iPS-15b Cell Line embryonic stem cell
29 chr12:66867000-66868400 Weak transcription Right Atrium heart
30 chr12:66867200-66868400 Weak transcription iPS-15b Cell Line embryonic stem cell
31 chr12:66867200-66868400 Weak transcription Pancreas Pancrea
32 chr12:66867800-66868200 Weak transcription Fetal Adrenal Gland Adrenal Gland
33 chr12:66868400-66868600 ZNF genes & repeats H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
34 chr12:66868400-66868600 ZNF genes & repeats H9 Cell Line embryonic stem cell
35 chr12:66868400-66868600 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
36 chr12:66868400-66868600 ZNF genes & repeats iPS-15b Cell Line embryonic stem cell
37 chr12:66868400-66868600 ZNF genes & repeats iPS-18 Cell Line embryonic stem cell
38 chr12:66868400-66868600 ZNF genes & repeats iPS-20b Cell Line embryonic stem cell
39 chr12:66868400-66868600 ZNF genes & repeats Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
40 chr12:66868400-66868600 ZNF genes & repeats Primary hematopoietic stem cells short term culture blood
41 chr12:66868400-66868600 ZNF genes & repeats Primary T helper naive cells fromperipheralblood blood
42 chr12:66868400-66868600 Flanking Bivalent TSS/Enh Primary T helper 17 cells PMA-I stimulated --
43 chr12:66868400-66868600 ZNF genes & repeats Primary T helper cells fromperipheralblood blood
44 chr12:66868400-66868600 Bivalent Enhancer Primary T regulatory cells fromperipheralblood blood
45 chr12:66868400-66868600 Bivalent Enhancer Primary T cells effector/memory enriched fromperipheralblood blood
46 chr12:66868400-66868600 Flanking Bivalent TSS/Enh Primary hematopoietic stem cells G-CSF-mobilized Female --
47 chr12:66868400-66868600 ZNF genes & repeats Adipose Nuclei Adipose
48 chr12:66868400-66868600 Flanking Bivalent TSS/Enh Liver Liver
49 chr12:66868400-66868600 Flanking Bivalent TSS/Enh Brain Cingulate Gyrus brain
50 chr12:66868400-66868600 ZNF genes & repeats Brain Hippocampus Middle brain

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