Variant report

Variant	nsv564416
Chromosome Location	chr14:39140536-39440106
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:1319)
CpG islands
(count:183)
Chromatin interactive
region (count:48)
LncRNA
region (count:18)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:1319 , 50 per page) page: 1 2 3 4 5 6 7 ... 27

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr14:39324637-39325034	HepG2	liver:	n/a	n/a
2	ARID3A	chr14:39352251-39352701	HepG2	liver:	n/a	chr14:39352333-39352349
3	ARID3A	chr14:39433888-39434438	HepG2	liver:	n/a	n/a
4	ARID3A	chr14:39350421-39350651	HepG2	liver:	n/a	n/a
5	ARID3A	chr14:39191075-39191411	HepG2	liver:	n/a	n/a
6	ARID3A	chr14:39353442-39353584	HepG2	liver:	n/a	n/a
7	ARID3A	chr14:39337705-39338397	HepG2	liver:	n/a	n/a
8	ARID3A	chr14:39336756-39337350	HepG2	liver:	n/a	n/a
9	BACH1	chr14:39193066-39193072	H1-hESC	embryonic stem cell:	n/a	n/a
10	BACH1	chr14:39401603-39401789	H1-hESC	embryonic stem cell:	n/a	n/a
11	BACH1	chr14:39378402-39378716	H1-hESC	embryonic stem cell:	n/a	n/a
12	BCL3	chr14:39377237-39377526	GM12878	blood:	n/a	n/a
13	BHLHE40	chr14:39324868-39325068	HepG2	liver:	n/a	n/a
14	BRCA1	chr14:39247661-39247666	GM12878	blood:	n/a	n/a
15	BRCA1	chr14:39308735-39309404	Hela-S3	cervix:	n/a	n/a
16	BRCA1	chr14:39336676-39337062	Hela-S3	cervix:	n/a	n/a
17	BRCA1	chr14:39321919-39321965	GM12878	blood:	n/a	n/a
18	CEBPB	chr14:39171495-39171734	HepG2	liver:	n/a	n/a
19	CEBPB	chr14:39310365-39310688	HepG2	liver:	n/a	n/a
20	CEBPB	chr14:39257566-39257629	HepG2	liver:	n/a	n/a
21	CEBPB	chr14:39258148-39258411	K562	blood:	n/a	chr14:39258283-39258294
22	CEBPB	chr14:39258149-39258462	HepG2	liver:	n/a	chr14:39258283-39258294
23	CEBPB	chr14:39261058-39261258	HepG2	liver:	n/a	chr14:39261104-39261117 chr14:39261105-39261116
24	CEBPB	chr14:39347368-39347566	A549	lung:	n/a	n/a
25	CEBPB	chr14:39376341-39376661	HepG2	liver:	n/a	chr14:39376550-39376563 chr14:39376467-39376476 chr14:39376467-39376478 chr14:39376467-39376478 chr14:39376488-39376499 chr14:39376465-39376476 chr14:39376467-39376476 chr14:39376465-39376478 chr14:39376487-39376504 chr14:39376467-39376476 chr14:39376467-39376476
26	CEBPB	chr14:39324839-39325134	HepG2	liver:	n/a	chr14:39324998-39325009
27	CEBPB	chr14:39260262-39260316	A549	lung:	n/a	n/a
28	CEBPB	chr14:39324868-39325090	HepG2	liver:	n/a	chr14:39324998-39325009
29	CEBPB	chr14:39176051-39176254	HepG2	liver:	n/a	chr14:39176157-39176168 chr14:39176157-39176170
30	CEBPB	chr14:39310368-39310591	A549	lung:	n/a	n/a
31	CEBPB	chr14:39310341-39310683	Hela-S3	cervix:	n/a	n/a
32	CEBPB	chr14:39309022-39309361	MCF-7	breast:	n/a	chr14:39309136-39309147
33	CEBPB	chr14:39350450-39350598	HepG2	liver:	n/a	n/a
34	CEBPB	chr14:39228767-39228863	HepG2	liver:	n/a	n/a
35	CEBPB	chr14:39397351-39397676	HepG2	liver:	n/a	chr14:39397513-39397524
36	CEBPB	chr14:39347306-39347486	HepG2	liver:	n/a	n/a
37	CEBPB	chr14:39259898-39259942	HepG2	liver:	n/a	chr14:39259913-39259926
38	CEBPB	chr14:39258136-39258446	IMR90	lung:	n/a	chr14:39258283-39258294
39	CEBPB	chr14:39397346-39397680	K562	blood:	n/a	chr14:39397513-39397524
40	CEBPB	chr14:39376355-39376611	A549	lung:	n/a	chr14:39376550-39376563 chr14:39376467-39376476 chr14:39376467-39376478 chr14:39376467-39376478 chr14:39376488-39376499 chr14:39376465-39376476 chr14:39376467-39376476 chr14:39376465-39376478 chr14:39376487-39376504 chr14:39376467-39376476 chr14:39376467-39376476
41	CEBPB	chr14:39147106-39147430	HepG2	liver:	n/a	chr14:39147254-39147265 chr14:39147253-39147266 chr14:39147255-39147264 chr14:39147253-39147264
42	CEBPB	chr14:39308777-39310096	Hela-S3	cervix:	n/a	chr14:39309136-39309147
43	CEBPB	chr14:39309002-39309208	A549	lung:	n/a	chr14:39309136-39309147
44	CEBPB	chr14:39412428-39412479	HepG2	liver:	n/a	n/a
45	CEBPB	chr14:39397314-39397701	MCF-7	breast:	n/a	chr14:39397513-39397524
46	CEBPB	chr14:39260985-39261342	H1-hESC	embryonic stem cell:	n/a	chr14:39261104-39261117 chr14:39261105-39261116
47	CEBPB	chr14:39308980-39309305	HepG2	liver:	n/a	chr14:39309136-39309147
48	CEBPB	chr14:39309020-39309318	ECC-1	luminal epithelium:	n/a	chr14:39309136-39309147
49	CEBPB	chr14:39361291-39361420	HepG2	liver:	n/a	n/a
50	CEBPB	chr14:39309520-39309747	HepG2	liver:	n/a	n/a

(count:183 , 50 per page) page: 1 2 3 4

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr14:39307962-39308012	HUVEC	blood vessel:	n/a
2	chr14:39307962-39308012	HCF	heart:	n/a
3	chr14:39307962-39308012	AoSMC	blood vessel:	n/a
4	chr14:39308881-39308931	HPAEpiC	pulmonary alveolar:	n/a
5	chr14:39308079-39308129	T-47D	breast:	n/a
6	chr14:39308881-39308931	NB4	blood:	n/a
7	chr14:39308079-39308129	Hela-S3	cervix:	n/a
8	chr14:39308079-39308129	Jurkat	blood:	n/a
9	chr14:39308079-39308129	GM12892	blood:	n/a
10	chr14:39307962-39308012	H1-hESC	embryonic stem cell:	embryo
11	chr14:39308079-39308129	Hepatocyte	liver:	n/a
12	chr14:39308881-39308931	HCM	heart:	n/a
13	chr14:39307962-39308012	HAEpiC	amniotic membrane:	n/a
14	chr14:39308079-39308129	PrEC	prostate:	n/a
15	chr14:39308881-39308931	HUVEC	blood vessel:	n/a
16	chr14:39307962-39308012	HIPEpiC	eye:	n/a
17	chr14:39308079-39308129	IMR90	lung:	fetal
18	chr14:39308881-39308931	ovcar-3	ovarian:	n/a
19	chr14:39308079-39308129	HepG2	liver:	n/a
20	chr14:39307962-39308012	K562	blood:	n/a
21	chr14:39307962-39308012	PFSK-1	brain:	n/a
22	chr14:39308079-39308129	HUVEC	blood vessel:	n/a
23	chr14:39307962-39308012	T-47D	breast:	n/a
24	chr14:39308881-39308931	HMEC	breast:	n/a
25	chr14:39308881-39308931	ProgFib	skin:	n/a
26	chr14:39308079-39308129	NHBE	bronchial:	n/a
27	chr14:39308881-39308931	HRPEpiC	eye:	n/a
28	chr14:39308881-39308931	HRCEpiC	kidney:	n/a
29	chr14:39308079-39308129	HEK293	kidney:	embryo
30	chr14:39308881-39308931	NH-A	brain:	n/a
31	chr14:39308881-39308931	PANC-1	pancreas:	n/a
32	chr14:39308881-39308931	MCF10A-Er-Src	breast:	n/a
33	chr14:39308079-39308129	Caco-2	colon:	n/a
34	chr14:39307962-39308012	AG04450	lung:	fetal
35	chr14:39308079-39308129	NB4	blood:	n/a
36	chr14:39308079-39308129	NT2-D1	testis:	n/a
37	chr14:39308881-39308931	HCPEpiC	choroid plexus:	n/a
38	chr14:39307962-39308012	HNPCEpiC	eye:	n/a
39	chr14:39308881-39308931	Jurkat	blood:	n/a
40	chr14:39307962-39308012	Hela-S3	cervix:	n/a
41	chr14:39308881-39308931	Hepatocyte	liver:	n/a
42	chr14:39307962-39308012	NH-A	brain:	n/a
43	chr14:39308079-39308129	HMEC	breast:	n/a
44	chr14:39307962-39308012	HRCEpiC	kidney:	n/a
45	chr14:39307962-39308012	GM12891	blood:	n/a
46	chr14:39307962-39308012	HEK293	kidney:	embryo
47	chr14:39307962-39308012	GM19239	blood:	n/a
48	chr14:39308079-39308129	AG09309	skin:	n/a
49	chr14:39308079-39308129	ovcar-3	ovarian:	n/a
50	chr14:39307962-39308012	HPAEpiC	pulmonary alveolar:	n/a

(count:48 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr14:39074220..39075249-chr14:39336439..39337107,3	MCF-7	breast:
2	chr14:39412833..39415383-chr14:39419578..39422326,3	MCF-7	breast:
3	chr14:39244076..39244917-chr2:3391368..3392121,2	MCF-7	breast:
4	chr14:39301612..39303299-chr14:39311657..39313476,2	MCF-7	breast:
5	chr14:39190717..39191738-chr14:39484001..39485313,7	MCF-7	breast:
6	chr14:39341664..39344220-chr14:39347442..39349909,2	MCF-7	breast:
7	chr14:39284637..39287612-chr14:39288269..39291004,2	K562	blood:
8	chr14:39333342..39335144-chr14:39336605..39338510,2	K562	blood:
9	chr14:39324002..39326709-chr14:39331497..39334526,3	K562	blood:
10	chr14:39324002..39326709-chr14:39331497..39334526,3	K562	blood:
11	chr14:39299647..39301167-chr17:41400823..41402637,2	MCF-7	breast:
12	chr14:39269261..39271872-chr14:39273107..39275037,2	K562	blood:
13	chr14:39345165..39347327-chr14:39348361..39351300,3	MCF-7	breast:
14	chr14:39190760..39191270-chr14:39336463..39337395,3	K562	blood:
15	chr14:39412833..39415383-chr14:39419578..39422326,3	MCF-7	breast:
16	chr14:39299667..39302667-chr17:41399639..41402216,3	K562	blood:
17	chr14:39214251..39216737-chr14:39221189..39223720,2	MCF-7	breast:
18	chr14:39409994..39412907-chr14:39426330..39428595,2	MCF-7	breast:
19	chr14:39191195..39191809-chr14:39336434..39337274,3	MCF-7	breast:
20	chr14:39269261..39271872-chr14:39273107..39275037,2	K562	blood:
21	chr14:39301612..39303299-chr14:39311657..39313476,2	MCF-7	breast:
22	chr14:39214251..39216737-chr14:39221189..39223720,2	MCF-7	breast:
23	chr14:39301167..39302667-chr17:41380615..41383519,2	K562	blood:
24	chr14:39410789..39411608-chr14:39483894..39485313,6	MCF-7	breast:
25	chr14:39190836..39192002-chr14:39336266..39337492,9	MCF-7	breast:
26	chr14:39190760..39191270-chr14:39336463..39337395,3	K562	blood:
27	chr14:38372704..38373564-chr14:39336508..39337178,3	K562	blood:
28	chr14:39284637..39287612-chr14:39288269..39291004,2	K562	blood:
29	chr14:39333342..39335144-chr14:39336605..39338510,2	K562	blood:
30	chr14:39345165..39347327-chr14:39348361..39351300,3	MCF-7	breast:
31	chr14:21571639..21574238-chr14:39269844..39272001,2	MCF-7	breast:
32	chr14:39288692..39291150-chr14:39292998..39295978,2	K562	blood:
33	chr14:39190836..39192002-chr14:39336266..39337492,9	MCF-7	breast:
34	chr14:39344148..39344668-chr2:36899113..36899743,2	MCF-7	breast:
35	chr14:39191195..39191809-chr14:39336434..39337274,3	MCF-7	breast:
36	chr14:39223383..39224246-chr6:89075754..89076656,2	MCF-7	breast:
37	chr14:39380747..39381570-chr14:39484361..39485038,2	K562	blood:
38	chr14:39190797..39191604-chr14:39484170..39485007,2	MCF-7	breast:
39	chr14:39288692..39291150-chr14:39292998..39295978,2	K562	blood:
40	chr14:39341664..39344220-chr14:39347442..39349909,2	MCF-7	breast:
41	chr14:39409994..39412907-chr14:39426330..39428595,2	MCF-7	breast:
42	chr14:39301147..39302647-chr17:41466196..41467820,2	MCF-7	breast:
43	chr14:39116309..39118781-chr14:39205092..39207512,2	MCF-7	breast:
44	chr14:39366197..39366930-chr7:100486909..100487549,2	MCF-7	breast:
45	chr14:39336463..39337323-chr14:39484303..39484820,2	MCF-7	breast:
46	chr14:39190911..39191748-chr14:39503600..39504605,4	MCF-7	breast:
47	chr14:39074390..39075072-chr14:39192252..39192857,2	MCF-7	breast:
48	chr14:39299667..39301167-chr17:41380346..41382223,2	K562	blood:

(count:18 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-GEMIN2-2	chr14:39434292-39434404	XLOC_010810
2	lnc-GEMIN2-2	chr14:39377287-39377321	XLOC_010810
3	lnc-GEMIN2-2	chr14:39434291-39434404	NONHSAT036504
4	lnc-GEMIN2-9	chr14:39304593-39304992	NONHSAT036499
5	lnc-SEC23A-1	chr14:39417382-39417441	ENSG00000259070.1
6	lnc-SEC23A-1	chr14:39410558-39410577	ENSG00000259070.1
7	lnc-SEC23A-1	chr14:39308093-39308408	ENSG00000259070.1
8	lnc-GEMIN2-2	chr14:39425420-39425537	XLOC_010810
9	lnc-GEMIN2-2	chr14:39434292-39434491	XLOC_010810
10	lnc-SEC23A-1	chr14:39308050-39308408	ENSG00000259070.1
11	lnc-GEMIN2-2	chr14:39420873-39420994	XLOC_010810
12	lnc-GEMIN2-2	chr14:39420872-39420994	NONHSAT036504
13	lnc-SEC23A-1	chr14:39410724-39410899	ENSG00000259070.1
14	lnc-GEMIN2-2	chr14:39420873-39420994	XLOC_010810
15	lnc-GEMIN2-2	chr14:39425420-39425537	XLOC_010810
16	lnc-SEC23A-1	chr14:39417382-39417410	ENSG00000259070.1
17	lnc-GEMIN2-2	chr14:39425419-39425537	NONHSAT036504
18	lnc-SEC23A-1	chr14:39410724-39410899	ENSG00000259070.1

No data

Variant related genes	Relation type
LINC00639	TF binding region
KRT8P1	TF binding region
ENSG00000258680	TF binding region
LINC00639	CpG island
KRT8P1	CpG island
ENSG00000258680	CpG island
ENSG00000271468	chromatin interactions
ENSG00000176125	chromatin interactions
ENSG00000171853	chromatin interactions
ENSG00000165804	chromatin interactions
ENSG00000188825	chromatin interactions
ENSG00000236383	chromatin interactions
TCTA	miRNA target sites
CROT	miRNA target sites
HUWE1	miRNA target sites
EIF2C1	miRNA target sites
TDG	miRNA target sites

Extended variants
information (count: 8099 )
Associated
traits (count: 61 )

Variant overlapped rSNPs/rCNVs (count:8099 , 50 per page) page: 1 2 3 4 5 6 7 ... 162

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs541429860	chr14:39162201-39162202	Enhancers	n/a	n/a	Overlapped CNVs	n/a
2	rs570952033	chr14:39162212-39162213	Enhancers	n/a	n/a	Overlapped CNVs	n/a
3	rs34886648	chr14:39162215-39162216	Enhancers	n/a	n/a	Overlapped CNVs	n/a
4	rs185609130	chr14:39162233-39162234	Enhancers	n/a	n/a	Overlapped CNVs	n/a
5	rs189385300	chr14:39162269-39162270	Enhancers	n/a	n/a	Overlapped CNVs	n/a
6	rs552776356	chr14:39162277-39162278	Enhancers	n/a	n/a	Overlapped CNVs	n/a
7	rs1375733	chr14:39162323-39162324	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
8	rs12586916	chr14:39162326-39162327	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
9	rs555701903	chr14:39162333-39162334	Enhancers	n/a	n/a	Overlapped CNVs	n/a
10	rs377518110	chr14:39162349-39162350	Enhancers	n/a	n/a	Overlapped CNVs	n/a
11	rs1375734	chr14:39162358-39162359	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
12	rs532798931	chr14:39162378-39162379	Enhancers	n/a	n/a	Overlapped CNVs	n/a
13	rs537746817	chr14:39162388-39162389	Enhancers	n/a	n/a	Overlapped CNVs	n/a
14	rs1375735	chr14:39162402-39162403	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
15	rs577748229	chr14:39162409-39162410	Enhancers	n/a	n/a	Overlapped CNVs	n/a
16	rs138524197	chr14:39162459-39162460	Enhancers	n/a	n/a	Overlapped CNVs	n/a
17	rs559394380	chr14:39162506-39162507	Enhancers	n/a	n/a	Overlapped CNVs	n/a
18	rs572908110	chr14:39162531-39162532	Enhancers	n/a	n/a	Overlapped CNVs	n/a
19	rs192518092	chr14:39162548-39162549	Enhancers	n/a	n/a	Overlapped CNVs	n/a
20	rs148833617	chr14:39162599-39162600	Enhancers	n/a	n/a	Overlapped CNVs	n/a
21	rs143486570	chr14:39162600-39162601	Enhancers	n/a	n/a	Overlapped CNVs	n/a
22	rs534543333	chr14:39163505-39163506	Enhancers	n/a	n/a	Overlapped CNVs	n/a
23	rs8016039	chr14:39163506-39163507	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
24	rs544232042	chr14:39163515-39163516	Enhancers	n/a	n/a	Overlapped CNVs	n/a
25	rs558436339	chr14:39163518-39163519	Enhancers	n/a	n/a	Overlapped CNVs	n/a
26	rs578221638	chr14:39163564-39163565	Enhancers	n/a	n/a	Overlapped CNVs	n/a
27	rs139852922	chr14:39163565-39163566	Enhancers	n/a	n/a	Overlapped CNVs	n/a
28	rs59248060	chr14:39163649-39163650	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
29	rs373653861	chr14:39163685-39163686	Enhancers	n/a	n/a	Overlapped CNVs	n/a
30	rs535542252	chr14:39163700-39163701	Enhancers	n/a	n/a	Overlapped CNVs	n/a
31	rs367737738	chr14:39163711-39163712	Enhancers	n/a	n/a	Overlapped CNVs	n/a
32	rs529476827	chr14:39163748-39163749	Enhancers	n/a	n/a	Overlapped CNVs	n/a
33	rs181295469	chr14:39163750-39163751	Enhancers	n/a	n/a	Overlapped CNVs	n/a
34	rs563957388	chr14:39163795-39163796	Enhancers	n/a	n/a	Overlapped CNVs	n/a
35	rs74668040	chr14:39163798-39163799	Enhancers	n/a	n/a	Overlapped CNVs	n/a
36	rs531348965	chr14:39163809-39163810	Enhancers	n/a	n/a	Overlapped CNVs	n/a
37	rs551133126	chr14:39163825-39163826	Enhancers	n/a	n/a	Overlapped CNVs	n/a
38	rs550592242	chr14:39163867-39163868	Enhancers	n/a	n/a	Overlapped CNVs	n/a
39	rs61999044	chr14:39163889-39163890	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
40	rs35119725	chr14:39163900-39163901	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
41	rs547272698	chr14:39163912-39163913	Enhancers	n/a	n/a	Overlapped CNVs	n/a
42	rs567138763	chr14:39163914-39163915	Enhancers	n/a	n/a	Overlapped CNVs	n/a
43	rs536008991	chr14:39163926-39163927	Enhancers	n/a	n/a	Overlapped CNVs	n/a
44	rs532996089	chr14:39163939-39163940	Enhancers	n/a	n/a	Overlapped CNVs	n/a
45	rs185986129	chr14:39163947-39163948	Enhancers	n/a	n/a	Overlapped CNVs	n/a
46	rs541232375	chr14:39164209-39164210	Enhancers	n/a	n/a	Overlapped CNVs	n/a
47	rs34440784	chr14:39164213-39164214	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
48	rs527257023	chr14:39164302-39164303	Enhancers	n/a	n/a	Overlapped CNVs	n/a
49	rs80309289	chr14:39164306-39164307	Enhancers	n/a	n/a	Overlapped CNVs	n/a
50	rs374785839	chr14:39164318-39164319	Enhancers	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:61)

Disease	PMID	Source
Esophageal cancer	21851588	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Retinoblastoma	21504564	CNVD
High-proliferative meningiomas	17937814	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Autism	22495311	CNVD
Non-small cell lung cancer	21044232	CNVD
Renal cell carcinoma	19461508	CNVD
Cancer	21637783	CNVD
Colorectal cancer	20709793	CNVD
Melanoma	18172304	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Medulloblastoma	21979893	CNVD
Oral cancer	21386901	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Hepatocellular carcinoma	22174799	CNVD
Colorectal cancer	16774939	CNVD
Neuroblastoma	19435921	CNVD
Colorectal cancer	19359472	CNVD
Breast cancer	17899364	CNVD
Gastrointestinal stromal cancer	19259404	CNVD
Gastrointestinal stromal cancer	17535989	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Paraganglioma	17535989	CNVD
Pulmonary chondroma	17535989	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Gastrointestinal stromal cancer	20818650	CNVD
Renal cell carcinoma	21668985	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Chronic myeloid leukemia	20724749	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Wilms tumour	21544195	CNVD
Invasive pancreatic ductal carcinoma	16982739	CNVD
Burkitt''s lymphoma	19759907	CNVD
Lung cancer	18438408	CNVD
Urothelial carcinoma	21177765	CNVD
Multiple myeloma	17550852	CNVD
Breast cancer	21785460	CNVD
Acute lymphoblastic leukemia	21098271	CNVD
Colorectal cancer	16272173	CNVD
Prostate cancer	18632612	CNVD
small cell lung cancer	20016488	CNVD
abnormal development	18461090	CNVD
Prostate cancer	21298110	CNVD
Metanephric adenoma	20802469	CNVD
Breast cancer	21364760	CNVD
Breast cancer	21858162	CNVD
Myelofibrosis	22110671	CNVD
Intellectual disability	22045946	CNVD
Hirschsprung''s Disease	21712996	CNVD
Cancer	21183584	CNVD
Thyroid cancer	19470727	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Cancer	20164919	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD

Chromatin state (count:816 , 50 per page) page: 1 2 3 4 5 6 7 ... 17

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:39162200-39162600	Enhancers	H9 Cell Line	embryonic stem cell
2	chr14:39163400-39164000	Enhancers	Spleen	Spleen
3	chr14:39164200-39164600	Enhancers	Brain Substantia Nigra	brain
4	chr14:39164400-39164600	Enhancers	Brain Inferior Temporal Lobe	brain
5	chr14:39173000-39173400	Active TSS	Pancreatic Islets	Pancreatic Islet
6	chr14:39173400-39173600	Flanking Active TSS	Pancreatic Islets	Pancreatic Islet
7	chr14:39173600-39175800	Enhancers	Pancreatic Islets	Pancreatic Islet
8	chr14:39175800-39181400	Weak transcription	Pancreatic Islets	Pancreatic Islet
9	chr14:39179800-39180400	Enhancers	Primary monocytes fromperipheralblood	blood
10	chr14:39179800-39180800	Enhancers	Primary neutrophils fromperipheralblood	blood
11	chr14:39181400-39181800	Enhancers	Pancreatic Islets	Pancreatic Islet
12	chr14:39181800-39185800	Weak transcription	Pancreatic Islets	Pancreatic Islet
13	chr14:39184800-39186200	Weak transcription	Brain Substantia Nigra	brain
14	chr14:39185800-39186200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
15	chr14:39185800-39186800	Enhancers	Brain Hippocampus Middle	brain
16	chr14:39185800-39186800	Enhancers	Pancreatic Islets	Pancreatic Islet
17	chr14:39185800-39186800	Enhancers	Hela-S3	cervix
18	chr14:39185800-39187600	Enhancers	Brain Inferior Temporal Lobe	brain
19	chr14:39185800-39188400	Enhancers	Brain Cingulate Gyrus	brain
20	chr14:39186000-39186400	Enhancers	Primary B cells from peripheral blood	blood
21	chr14:39186000-39186400	Enhancers	HSMMtube	muscle
22	chr14:39186000-39186800	Enhancers	Primary B cells from cord blood	blood
23	chr14:39186000-39186800	Enhancers	Brain Angular Gyrus	brain
24	chr14:39186200-39186800	Enhancers	Brain Substantia Nigra	brain
25	chr14:39186400-39186600	Enhancers	Brain Anterior Caudate	brain
26	chr14:39186600-39197000	Weak transcription	Brain Anterior Caudate	brain
27	chr14:39186800-39187800	Weak transcription	Brain Substantia Nigra	brain
28	chr14:39186800-39188000	Weak transcription	Brain Hippocampus Middle	brain
29	chr14:39186800-39191000	Weak transcription	Pancreatic Islets	Pancreatic Islet
30	chr14:39186800-39197400	Weak transcription	Brain Angular Gyrus	brain
31	chr14:39187600-39197000	Weak transcription	Brain Inferior Temporal Lobe	brain
32	chr14:39187800-39188200	Enhancers	Adipose Nuclei	Adipose
33	chr14:39187800-39188200	Enhancers	Brain Substantia Nigra	brain
34	chr14:39187800-39188600	Enhancers	Primary neutrophils fromperipheralblood	blood
35	chr14:39188000-39188400	Enhancers	Breast Myoepithelial Primary Cells	Breast
36	chr14:39188000-39188400	Enhancers	Brain Hippocampus Middle	brain
37	chr14:39188200-39197000	Weak transcription	Brain Substantia Nigra	brain
38	chr14:39188400-39196200	Weak transcription	Brain Cingulate Gyrus	brain
39	chr14:39188400-39197000	Weak transcription	Brain Hippocampus Middle	brain
40	chr14:39188600-39190800	Weak transcription	Primary neutrophils fromperipheralblood	blood
41	chr14:39189400-39189600	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
42	chr14:39190800-39191200	Enhancers	HUVEC	blood vessel
43	chr14:39190800-39191800	Enhancers	Primary neutrophils fromperipheralblood	blood
44	chr14:39191000-39192000	Enhancers	Pancreatic Islets	Pancreatic Islet
45	chr14:39192000-39193000	Weak transcription	Pancreatic Islets	Pancreatic Islet
46	chr14:39193000-39193200	Enhancers	Pancreatic Islets	Pancreatic Islet
47	chr14:39193000-39193400	Enhancers	HUES48 Cell Line	embryonic stem cell
48	chr14:39193400-39194000	Enhancers	Fetal Kidney	kidney
49	chr14:39194000-39201400	Weak transcription	Fetal Kidney	kidney
50	chr14:39196200-39196400	Enhancers	Brain Cingulate Gyrus	brain

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links