Variant report

Variant	nsv569058
Chromosome Location	chr15:34729951-34982384
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:3486)
CpG islands
(count:2568)
Chromatin interactive
region (count:120)
LncRNA
region (count:24)
Mature miRNA
region (count: 2)
miRNA target
sites (count:2)

(count:3486 , 50 per page) page: 1 2 3 4 5 6 7 ... 70

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr15:34953056-34953951	K562	blood:	n/a	n/a
2	ARID3A	chr15:34949658-34950365	K562	blood:	n/a	n/a
3	ARID3A	chr15:34915270-34915290	K562	blood:	n/a	n/a
4	ARID3A	chr15:34731584-34731600	K562	blood:	n/a	n/a
5	ARID3A	chr15:34902659-34902943	K562	blood:	n/a	n/a
6	ARID3A	chr15:34905532-34905838	K562	blood:	n/a	n/a
7	ARID3A	chr15:34952157-34952158	K562	blood:	n/a	n/a
8	ARID3A	chr15:34954510-34955719	K562	blood:	n/a	n/a
9	ARID3A	chr15:34886706-34886742	K562	blood:	n/a	n/a
10	ARID3A	chr15:34944080-34945342	K562	blood:	n/a	n/a
11	ARID3A	chr15:34939172-34940883	K562	blood:	n/a	n/a
12	ARID3A	chr15:34781246-34781587	K562	blood:	n/a	n/a
13	ARID3A	chr15:34929245-34929276	K562	blood:	n/a	n/a
14	ARID3A	chr15:34908827-34909205	K562	blood:	n/a	n/a
15	ARID3A	chr15:34880209-34880840	HepG2	liver:	n/a	n/a
16	ARID3A	chr15:34913827-34914853	K562	blood:	n/a	chr15:34914367-34914383 chr15:34914368-34914384
17	ARID3A	chr15:34946314-34948129	K562	blood:	n/a	n/a
18	ARID3A	chr15:34916436-34916602	K562	blood:	n/a	n/a
19	ARID3A	chr15:34880295-34880915	K562	blood:	n/a	n/a
20	ARID3A	chr15:34948740-34948973	K562	blood:	n/a	n/a
21	ARID3A	chr15:34869965-34870045	HepG2	liver:	n/a	n/a
22	ARID3A	chr15:34875226-34875237	K562	blood:	n/a	n/a
23	ATF1	chr15:34947575-34947975	K562	blood:	n/a	n/a
24	ATF1	chr15:34880295-34880819	K562	blood:	n/a	n/a
25	ATF1	chr15:34944877-34945255	K562	blood:	n/a	n/a
26	ATF1	chr15:34936394-34936711	K562	blood:	n/a	n/a
27	ATF1	chr15:34908847-34909148	K562	blood:	n/a	n/a
28	ATF1	chr15:34808283-34808324	K562	blood:	n/a	n/a
29	ATF1	chr15:34905714-34905797	K562	blood:	n/a	n/a
30	ATF1	chr15:34896856-34896884	K562	blood:	n/a	n/a
31	ATF1	chr15:34946741-34947211	K562	blood:	n/a	n/a
32	ATF1	chr15:34913992-34914213	K562	blood:	n/a	n/a
33	ATF1	chr15:34940100-34940799	K562	blood:	n/a	n/a
34	ATF1	chr15:34761374-34761389	K562	blood:	n/a	n/a
35	ATF1	chr15:34949656-34950320	K562	blood:	n/a	n/a
36	ATF1	chr15:34807442-34807640	K562	blood:	n/a	n/a
37	ATF1	chr15:34870112-34870339	K562	blood:	n/a	n/a
38	ATF2	chr15:34880089-34880894	GM12878	blood:	n/a	n/a
39	ATF2	chr15:34942304-34942739	GM12878	blood:	n/a	n/a
40	ATF2	chr15:34880257-34880906	GM12878	blood:	n/a	n/a
41	ATF2	chr15:34942319-34942566	GM12878	blood:	n/a	n/a
42	ATF2	chr15:34880485-34880875	H1-hESC	embryonic stem cell:	n/a	n/a
43	ATF3	chr15:34781262-34781502	K562	blood:	n/a	n/a
44	ATF3	chr15:34908811-34909131	K562	blood:	n/a	n/a
45	BACH1	chr15:34949732-34950003	K562	blood:	n/a	n/a
46	BACH1	chr15:34806578-34807213	H1-hESC	embryonic stem cell:	n/a	n/a
47	BACH1	chr15:34876822-34876846	K562	blood:	n/a	n/a
48	BACH1	chr15:34944497-34944500	K562	blood:	n/a	n/a
49	BATF	chr15:34842337-34842744	GM12878	blood:	n/a	n/a
50	BATF	chr15:34762243-34762455	GM12878	blood:	n/a	n/a

(count:2568 , 50 per page) page: 1 2 3 4 5 6 7 ... 52

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr15:34875945-34875995	Jurkat	blood:	n/a
2	chr15:34781969-34782019	H1-hESC	embryonic stem cell:	embryo
3	chr15:34781705-34781755	IMR90	lung:	fetal
4	chr15:34807221-34807271	NH-A	brain:	n/a
5	chr15:34786594-34786644	H1-hESC	embryonic stem cell:	embryo
6	chr15:34875825-34875875	HRPEpiC	eye:	n/a
7	chr15:34875945-34875995	Jurkat	blood:	n/a
8	chr15:34781969-34782019	H1-hESC	embryonic stem cell:	embryo
9	chr15:34781705-34781755	IMR90	lung:	fetal
10	chr15:34807221-34807271	NH-A	brain:	n/a
11	chr15:34786594-34786644	H1-hESC	embryonic stem cell:	embryo
12	chr15:34875825-34875875	HRPEpiC	eye:	n/a
13	chr15:34781969-34782019	PrEC	prostate:	n/a
14	chr15:34877407-34877457	HPAEpiC	pulmonary alveolar:	n/a
15	chr15:34876396-34876446	HEK293	kidney:	embryo
16	chr15:34876396-34876446	MCF-7	breast:	n/a
17	chr15:34782167-34782217	Caco-2	colon:	n/a
18	chr15:34880284-34880334	SK-N-MC	brain:	n/a
19	chr15:34730071-34730121	NHDF-neo	bronchial:	n/a
20	chr15:34876396-34876446	PANC-1	pancreas:	n/a
21	chr15:34806592-34806642	HCF	heart:	n/a
22	chr15:34807050-34807100	NT2-D1	testis:	n/a
23	chr15:34875250-34875300	HIPEpiC	eye:	n/a
24	chr15:34876283-34876333	BJ	skin:	n/a
25	chr15:34875117-34875167	H1-hESC	embryonic stem cell:	embryo
26	chr15:34806349-34806399	MCF-7	breast:	n/a
27	chr15:34807143-34807193	Jurkat	blood:	n/a
28	chr15:34806349-34806399	H1-hESC	embryonic stem cell:	embryo
29	chr15:34875325-34875375	HepG2	liver:	n/a
30	chr15:34874862-34874912	IMR90	lung:	fetal
31	chr15:34880284-34880334	H1-hESC	embryonic stem cell:	embryo
32	chr15:34787420-34787470	PrEC	prostate:	n/a
33	chr15:34876471-34876521	AG10803	skin:	n/a
34	chr15:34785380-34785430	GM06990	blood:	n/a
35	chr15:34791564-34791614	CMK	blood:	n/a
36	chr15:34876295-34876345	AG09309	skin:	n/a
37	chr15:34876283-34876333	MCF10A-Er-Src	breast:	n/a
38	chr15:34730071-34730121	ECC-1	luminal epithelium:	n/a
39	chr15:34807050-34807100	HUVEC	blood vessel:	n/a
40	chr15:34817982-34818032	ProgFib	skin:	n/a
41	chr15:34787400-34787450	CMK	blood:	n/a
42	chr15:34876295-34876345	PrEC	prostate:	n/a
43	chr15:34875930-34875980	MCF-7	breast:	n/a
44	chr15:34807050-34807100	AG09309	skin:	n/a
45	chr15:34786594-34786644	AG04449	skin:	fetal
46	chr15:34807221-34807271	GM12892	blood:	n/a
47	chr15:34781891-34781941	GM12892	blood:	n/a
48	chr15:34807050-34807100	MCF-7	breast:	n/a
49	chr15:34812400-34812450	HRE	kidney:	n/a
50	chr15:34807679-34807729	AG04450	lung:	fetal

(count:120 , 50 per page) page: 1 2 3

No.	Distal block	Cell Line	Cell type
1	chr15:34351759..34355755-chr15:34876768..34880095,3	K562	blood:
2	chr15:34727885..34731466-chr15:34878887..34881950,4	K562	blood:
3	chr15:34908586..34909269-chr15:35212549..35213068,2	MCF-7	breast:
4	chr15:34912716..34916752-chr15:34917196..34920581,4	K562	blood:
5	chr15:34659441..34662117-chr15:34875107..34877933,3	K562	blood:
6	chr15:34633931..34636680-chr15:34728775..34730381,2	K562	blood:
7	chr15:34728587..34731061-chr15:34780506..34783189,3	K562	blood:
8	chr15:34790342..34793794-chr15:34793900..34797346,3	K562	blood:
9	chr15:34898803..34900649-chr15:34905656..34908079,2	K562	blood:
10	chr15:34965205..34967093-chr15:34977923..34979811,2	K562	blood:
11	chr15:34786054..34786721-chr7:5632299..5632821,2	HCT-116	colon:
12	chr15:34870217..34872096-chr15:35279333..35281998,2	K562	blood:
13	chr15:34875152..34877762-chr15:34886558..34889393,2	MCF-7	breast:
14	chr15:34962423..34964134-chr15:34966956..34969710,3	K562	blood:
15	chr15:34912716..34916752-chr15:34917196..34920581,4	K562	blood:
16	chr15:34875762..34878300-chr15:34879087..34881803,6	K562	blood:
17	chr15:34941344..34943269-chr15:34977002..34979213,2	K562	blood:
18	chr15:34786049..34786720-chr7:5632277..5632906,2	NB4	blood:
19	chr15:34953489..34955951-chr15:35181219..35183157,2	K562	blood:
20	chr15:34759701..34761289-chr15:34761464..34762969,2	K562	blood:
21	chr15:34761476..34764376-chr15:34768521..34770931,2	K562	blood:
22	chr15:34892499..34894333-chr15:34896967..34899231,2	K562	blood:
23	chr15:34867657..34871070-chr15:34876144..34878325,3	K562	blood:
24	chr15:34769198..34772919-chr15:34774454..34777192,3	K562	blood:
25	chr15:34867657..34871070-chr15:34876144..34878325,3	K562	blood:
26	chr15:34934770..34937620-chr15:34950647..34953239,2	K562	blood:
27	chr15:34728587..34731061-chr15:34780506..34783189,2	K562	blood:
28	chr15:34949750..34952665-chr15:35241317..35244101,2	K562	blood:
29	chr15:34960754..34962321-chr15:34966390..34968165,2	K562	blood:
30	chr15:34908560..34909558-chr15:35212164..35213076,4	K562	blood:
31	chr15:34774551..34776237-chr15:34779411..34782082,2	K562	blood:
32	chr15:34628679..34631455-chr15:34874185..34875808,2	K562	blood:
33	chr15:34965468..34967744-chr15:34968524..34970610,2	K562	blood:
34	chr15:34728531..34731203-chr15:34733693..34737649,5	K562	blood:
35	chr15:34907702..34910411-chr15:34952455..34954523,2	K562	blood:
36	chr15:34727885..34731466-chr15:34878887..34881950,4	K562	blood:
37	chr15:34868472..34871070-chr15:34876144..34878325,2	K562	blood:
38	chr15:34960285..34962774-chr15:34963252..34966258,4	K562	blood:
39	chr15:34728066..34730668-chr15:34791069..34792682,2	K562	blood:
40	chr15:34913307..34914991-chr15:34929235..34931577,2	K562	blood:
41	chr15:34790196..34793794-chr15:34794467..34797662,3	K562	blood:
42	chr15:34658082..34661057-chr15:34874863..34877414,3	MCF-7	breast:
43	chr15:34931128..34933994-chr15:34934903..34936649,2	K562	blood:
44	chr15:34769198..34772919-chr15:34774454..34777192,3	K562	blood:
45	chr15:34946410..34947955-chr15:34948303..34950980,2	K562	blood:
46	chr15:34965468..34967744-chr15:34968524..34970610,2	K562	blood:
47	chr15:34953069..34954628-chr15:34955083..34957176,2	K562	blood:
48	chr15:34931128..34933994-chr15:34934903..34936649,2	K562	blood:
49	chr15:34898803..34900649-chr15:34905656..34908079,2	K562	blood:
50	chr15:34940940..34942564-chr15:34999108..35001019,2	K562	blood:

(count:24 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-GJD2-2	chr15:34972962-34973170	uc_385_-
2	lnc-GOLGA8A-1	chr15:34962302-34962370	XLOC_011421
3	lnc-GJD2-3	chr15:34858091-34858674	NONHSAT041597
4	lnc-GJD2-4	chr15:34875717-34875835	NONHSAT041596
5	lnc-GJD2-4	chr15:34845174-34845292	NONHSAT041596
6	lnc-GOLGA8B-1	chr15:34752685-34752950	uc_384_-
7	lnc-GOLGA8A-1	chr15:34947820-34947965	ENSG00000261304.1
8	lnc-GJD2-3	chr15:34874951-34875061	NONHSAT041597
9	lnc-GOLGA8A-1	chr15:34943885-34943977	ENSG00000261304.1
10	lnc-GJD2-1	chr15:34967556-34967834	XLOC_011422
11	lnc-GJD2-4	chr15:34845946-34846157	NONHSAT041596
12	lnc-GOLGA8A-1	chr15:34946499-34946618	ENSG00000261304.1
13	lnc-GOLGA8A-1	chr15:34948237-34948332	ucscGeneNc_uc001zji_1
14	lnc-GOLGA8A-1	chr15:34947820-34947978	XLOC_011421
15	lnc-GOLGA8A-1	chr15:34943336-34943463	ENSG00000261304.1
16	lnc-GOLGA8A-1	chr15:34943936-34946139	ucscGeneNc_uc001zji_1
17	lnc-AC114546.1-13	chr15:34972962-34973170	uc_385_+
18	lnc-GJD2-4	chr15:34845096-34845292	NONHSAT140232
19	lnc-GJD2-4	chr15:34843392-34843477	NONHSAT140232
20	lnc-C15orf55-4	chr15:34752685-34752950	uc_384_+
21	lnc-GJD2-4	chr15:34845946-34846157	NONHSAT140232
22	lnc-GJD2-4	chr15:34867026-34867115	NONHSAT041596
23	lnc-GJD2-4	chr15:34873667-34873700	NONHSAT140232
24	lnc-AC114546.1-12	chr15:34982173-34982277	NONHSAT041602

miRNA name	Chromosome Location	mirBase accession
hsa-miR-1233-5p	chr15:34820548-34820569	MIMAT0022943_1
hsa-miR-1233-3p	chr15:34820491-34820510	MIMAT0005588_1

(count:2 , 50 per page) page: 1

No.	miRNA target gene	miRNA name	Chromosome Location	mirBase accession
1	GOLGA8B	hsa-miR-15a-5p	chr15:34817527-34817548
2	GOLGA8B	hsa-miR-32-5p	chr15:34818291-34818311

Variant related genes	Relation type
ENSG00000261304	TF binding region
MIR1233-2	TF binding region
ENSG00000259892	TF binding region
GOLGA8A	TF binding region
ENSG00000252425	TF binding region
ENSG00000261559	TF binding region
HNRNPLP2	TF binding region
GOLGA8B	TF binding region
ENSG00000261304	CpG island
MIR1233-2	CpG island
ENSG00000259892	CpG island
GOLGA8A	CpG island
ENSG00000252425	CpG island
ENSG00000261559	CpG island
HNRNPLP2	CpG island
GOLGA8B	CpG island
ENSG00000266205	chromatin interactions
ENSG00000184507	chromatin interactions
ENSG00000259904	chromatin interactions
ENSG00000261304	chromatin interactions
ENSG00000128463	chromatin interactions
ENSG00000075618	chromatin interactions
ENSG00000176454	chromatin interactions
ENSG00000171421	chromatin interactions
ENSG00000169857	chromatin interactions
ENSG00000215252	chromatin interactions
ENSG00000198146	chromatin interactions
ENSG00000175265	chromatin interactions
ENSG00000259917	chromatin interactions
ENSG00000140199	chromatin interactions
ENSG00000182117	chromatin interactions
NEK9	miRNA target sites
NEK7	miRNA target sites

Extended variants
information (count: 7009 )
Associated
traits (count: 71 )

Variant overlapped rSNPs/rCNVs (count:7009 , 50 per page) page: 1 2 3 4 5 6 7 ... 141

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs112954048	chr15:34729951-34729952	Bivalent/Poised TSS Active TSS Enhancers Weak transcription	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	mRNA abundance
2	rs545546410	chr15:34729957-34729958	Bivalent/Poised TSS Active TSS Enhancers Weak transcription	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
3	rs563743418	chr15:34729979-34729980	Bivalent/Poised TSS Active TSS Enhancers Weak transcription	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
4	rs575863633	chr15:34729981-34729982	Bivalent/Poised TSS Active TSS Enhancers Weak transcription	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
5	rs73378023	chr15:34729987-34729988	Bivalent/Poised TSS Active TSS Enhancers Weak transcription	TF binding region Chromatin interactive region	6 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
6	rs561061636	chr15:34729996-34729997	Bivalent/Poised TSS Active TSS Enhancers Weak transcription	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
7	rs560929250	chr15:34730006-34730007	Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
8	rs528506616	chr15:34730008-34730009	Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
9	rs137874997	chr15:34730019-34730020	Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	mRNA abundance
10	rs113706238	chr15:34730020-34730021	Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
11	rs143090928	chr15:34730023-34730024	Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
12	rs146160016	chr15:34730024-34730025	Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	mRNA abundance
13	rs551525972	chr15:34730034-34730035	Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
14	rs113286744	chr15:34730047-34730048	Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
15	rs386782907	chr15:34730077-34730078	Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Enhancers	TF binding region CpG island Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
16	rs201672297	chr15:34730078-34730079	Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Enhancers	TF binding region CpG island Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
17	rs113808675	chr15:34730098-34730099	Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Enhancers	TF binding region CpG island Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
18	rs190904513	chr15:34730138-34730139	Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
19	rs138004505	chr15:34730142-34730143	Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
20	rs200539657	chr15:34730145-34730146	Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
21	rs143546468	chr15:34730146-34730147	Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
22	rs370438637	chr15:34730147-34730148	Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
23	rs534552710	chr15:34730154-34730155	Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
24	rs183446497	chr15:34730167-34730168	Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
25	rs79655199	chr15:34730171-34730172	Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	mRNA abundance
26	rs112549534	chr15:34730175-34730176	Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
27	rs538374275	chr15:34730237-34730238	Active TSS Flanking Active TSS Bivalent/Poised TSS Enhancers Bivalent Enhancer	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
28	rs77743589	chr15:34730265-34730266	Active TSS Flanking Active TSS Bivalent/Poised TSS Enhancers Bivalent Enhancer	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	mRNA abundance
29	rs551009693	chr15:34730274-34730275	Active TSS Flanking Active TSS Bivalent/Poised TSS Enhancers Bivalent Enhancer	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
30	rs79435826	chr15:34730282-34730283	Active TSS Flanking Active TSS Bivalent/Poised TSS Enhancers Bivalent Enhancer	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
31	rs554889090	chr15:34730283-34730284	Active TSS Flanking Active TSS Bivalent/Poised TSS Enhancers Bivalent Enhancer	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
32	rs573204359	chr15:34730385-34730386	Active TSS Flanking Active TSS Bivalent/Poised TSS Enhancers Bivalent Enhancer	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
33	rs540193861	chr15:34730399-34730400	Active TSS Flanking Active TSS Bivalent/Poised TSS Enhancers Bivalent Enhancer	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
34	rs187736376	chr15:34730412-34730413	Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS Enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
35	rs193191558	chr15:34730444-34730445	Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS Enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
36	rs570164493	chr15:34730446-34730447	Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS Enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
37	rs183344860	chr15:34730461-34730462	Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS Enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
38	rs188317451	chr15:34730491-34730492	Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS Enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
39	rs563490218	chr15:34730495-34730496	Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS Enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
40	rs530665447	chr15:34730572-34730573	Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS Enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
41	rs373234357	chr15:34730586-34730587	Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS Enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
42	rs141527196	chr15:34730631-34730632	Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
43	rs192551776	chr15:34730646-34730647	Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
44	rs528413760	chr15:34730651-34730652	Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
45	rs563535056	chr15:34730669-34730670	Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
46	rs12439426	chr15:34730758-34730759	Active TSS	TF binding region Chromatin interactive region	3 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
47	rs12443452	chr15:34730889-34730890	Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
48	rs538710339	chr15:34730890-34730891	Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
49	rs183776795	chr15:34730900-34730901	Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
50	rs556818533	chr15:34730939-34730940	Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:71)

Disease	PMID	Source
HDAC8	0	CNVD
NIPBL	0	CNVD
RAD21	0	CNVD
SMC1A	0	CNVD
SMC3	0	CNVD
Ewing''s sarcoma	21437220	CNVD
Schizophrenia	19415332	CNVD
Breast cancer	22522925	CNVD
Autism	22495311	CNVD
Wilms tumour	21544195	CNVD
Angelman syndrome	16183798	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Testicular germ cell tumor	18059402	CNVD
cataract	16735990	CNVD
Cancer	21637783	CNVD
Colorectal cancer	20709793	CNVD
Medulloblastoma	21979893	CNVD
spastic paraplegia with thinning of corpus callosum	19105190	CNVD
Schizophrenia	21324950	CNVD
Astrocytoma	17387387	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Disease	21824424	CNVD
Hodgkin''s lymphoma	18641027	CNVD
Melanoma	18172304	CNVD
Colorectal cancer	16774939	CNVD
Gastric cancer	17167181	CNVD
Neuroblastoma	19435921	CNVD
Colorectal cancer	19359472	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Multiple myeloma	17077331	CNVD
Colorectal cancer	16272173	CNVD
Gastrointestinal stromal cancer	20470368	CNVD
Multiple myeloma	17550852	CNVD
Intellectual disability	22102821	CNVD
Hodgkin''s lymphoma	17606441	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute myeloid leukemia	20729466	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Breast cancer	17133270	CNVD
Prostate cancer	16573809	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Multiple myeloma	20724749	CNVD
Lung cancer	18438408	CNVD
Breast cancer	21858162	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Breast cancer	21785460	CNVD
Abnormal corpus callosum	21572526	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Autism	19204725	CNVD
Schizophrenia	19204725	CNVD
Schizophrenia	19149910	CNVD
Ovarian cancer	22174824	CNVD
Prostate cancer	18632612	CNVD
small cell lung cancer	20016488	CNVD
Legius syndrome	19443465	CNVD
Holoprosencephaly	21359414	CNVD
Myelofibrosis	22110671	CNVD
Glioblastoma multiforme	22286061	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Prader-willi syndrome	21504564	CNVD
Cancer	17440070	CNVD
Basal cell lymphoma	17053054	CNVD
Pancreatic ductal adenocarcinoma	19077451	CNVD
Acute lymphoblastic leukemia	18458336	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD
lymphocytic leukemia	21291569	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Pancreatic cancer	17952125	CNVD

Chromatin state (count:2038 , 50 per page) page: 1 2 3 4 5 6 7 ... 41

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr15:34727800-34730200	Active TSS	HSMM	muscle
2	chr15:34728200-34730200	Active TSS	GM12878-XiMat	blood
3	chr15:34728200-34730200	Active TSS	Hela-S3	cervix
4	chr15:34728200-34730400	Active TSS	Fetal Brain Female	brain
5	chr15:34728400-34730200	Active TSS	IMR90 fetal lung fibroblasts Cell Line	lung
6	chr15:34728400-34730200	Active TSS	Foreskin Fibroblast Primary Cells skin01	Skin
7	chr15:34728400-34730400	Bivalent/Poised TSS	iPS-20b Cell Line	embryonic stem cell
8	chr15:34728400-34730400	Active TSS	Breast Myoepithelial Primary Cells	Breast
9	chr15:34728400-34730400	Active TSS	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
10	chr15:34728400-34730400	Active TSS	Rectal Mucosa Donor 29	rectum
11	chr15:34728400-34730400	Active TSS	Right Atrium	heart
12	chr15:34728400-34730400	Active TSS	NHDF-Ad	bronchial
13	chr15:34728400-34730600	Active TSS	Primary T helper cells PMA-I stimulated	--
14	chr15:34728600-34730000	Active TSS	K562	blood
15	chr15:34728600-34730000	Active TSS	NHEK	skin
16	chr15:34728600-34730200	Active TSS	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
17	chr15:34728600-34730200	Active TSS	H9 Cell Line	embryonic stem cell
18	chr15:34728600-34730200	Bivalent/Poised TSS	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
19	chr15:34728600-34730200	Active TSS	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
20	chr15:34728600-34730200	Bivalent/Poised TSS	HUES64 Cell Line	embryonic stem cell
21	chr15:34728600-34730200	Active TSS	iPS DF 19.11 Cell Line	embryonic stem cell
22	chr15:34728600-34730200	Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
23	chr15:34728600-34730200	Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
24	chr15:34728600-34730200	Active TSS	Primary T helper naive cells from peripheral blood	blood
25	chr15:34728600-34730200	Active TSS	Primary T helper naive cells fromperipheralblood	blood
26	chr15:34728600-34730200	Active TSS	Foreskin Melanocyte Primary Cells skin01	Skin
27	chr15:34728600-34730200	Active TSS	Colonic Mucosa	Colon
28	chr15:34728600-34730200	Active TSS	Duodenum Mucosa	Duodenum
29	chr15:34728600-34730200	Active TSS	Pancreatic Islets	Pancreatic Islet
30	chr15:34728600-34730200	Active TSS	Gastric	stomach
31	chr15:34728600-34730200	Active TSS	Left Ventricle	heart
32	chr15:34728600-34730200	Active TSS	Psoas Muscle	Psoas
33	chr15:34728600-34730400	Bivalent/Poised TSS	iPS-18 Cell Line	embryonic stem cell
34	chr15:34728600-34730400	Active TSS	Aorta	Aorta
35	chr15:34728600-34730400	Active TSS	Brain Angular Gyrus	brain
36	chr15:34728600-34730400	Active TSS	Brain Dorsolateral Prefrontal Cortex	brain
37	chr15:34728600-34730400	Active TSS	NH-A	brain
38	chr15:34728600-34730600	Active TSS	Ovary	ovary
39	chr15:34728800-34730000	Active TSS	Colon Smooth Muscle	Colon
40	chr15:34728800-34730000	Active TSS	Osteobl	bone
41	chr15:34728800-34730200	Bivalent/Poised TSS	ES-UCSF4 Cell Line	embryonic stem cell
42	chr15:34728800-34730200	Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
43	chr15:34728800-34730200	Active TSS	Muscle Satellite Cultured Cells	--
44	chr15:34728800-34730200	Active TSS	Brain Inferior Temporal Lobe	brain
45	chr15:34728800-34730200	Active TSS	Lung	lung
46	chr15:34728800-34730200	Active TSS	HSMMtube	muscle
47	chr15:34728800-34730400	Active TSS	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
48	chr15:34728800-34730400	Bivalent/Poised TSS	HUES6 Cell Line	embryonic stem cell
49	chr15:34728800-34730400	Active TSS	Primary T cells effector/memory enriched fromperipheralblood	blood
50	chr15:34728800-34730400	Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain

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