Variant report

Variant	nsv569410
Chromosome Location	chr15:52257874-52273132
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:697)
CpG islands
(count:916)
Chromatin interactive
region (count:58)
LncRNA
region (count:1)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:697 , 50 per page) page: 1 2 3 4 5 6 7 ... 14

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr15:52263763-52264015	K562	blood:	n/a	n/a
2	ARID3A	chr15:52263834-52264340	HepG2	liver:	n/a	n/a
3	ARID3A	chr15:52262314-52262958	HepG2	liver:	n/a	n/a
4	ATF1	chr15:52263791-52264194	K562	blood:	n/a	n/a
5	ATF2	chr15:52263714-52264280	GM12878	blood:	n/a	n/a
6	ATF2	chr15:52263616-52264275	GM12878	blood:	n/a	n/a
7	ATF2	chr15:52263565-52264188	H1-hESC	embryonic stem cell:	n/a	n/a
8	ATF2	chr15:52263763-52264266	H1-hESC	embryonic stem cell:	n/a	n/a
9	ATF3	chr15:52263741-52264269	H1-hESC	embryonic stem cell:	n/a	chr15:52264167-52264176
10	ATF3	chr15:52263744-52264218	H1-hESC	embryonic stem cell:	n/a	chr15:52264167-52264176
11	ATF3	chr15:52263605-52264191	HepG2	liver:	n/a	chr15:52263630-52263639 chr15:52264167-52264176
12	ATF3	chr15:52263669-52264283	GM12878	blood:	n/a	chr15:52264167-52264176
13	ATF3	chr15:52263449-52264284	A549	lung:	n/a	chr15:52263630-52263639 chr15:52264167-52264176
14	ATF3	chr15:52263861-52264124	GM12878	blood:	n/a	n/a
15	ATF3	chr15:52263571-52264196	K562	blood:	n/a	chr15:52263630-52263639 chr15:52264167-52264176
16	ATF3	chr15:52263690-52264260	HepG2	liver:	n/a	chr15:52264167-52264176
17	ATF3	chr15:52263584-52264226	A549	lung:	n/a	chr15:52263630-52263639 chr15:52264167-52264176
18	BACH1	chr15:52263491-52263786	H1-hESC	embryonic stem cell:	n/a	n/a
19	BCL3	chr15:52262976-52264132	A549	lung:	n/a	chr15:52263723-52263736
20	BCL3	chr15:52263517-52264150	A549	lung:	n/a	chr15:52263723-52263736
21	BCLAF1	chr15:52263359-52264293	GM12878	blood:	n/a	chr15:52263723-52263736 chr15:52264168-52264177
22	BCLAF1	chr15:52263588-52264235	GM12878	blood:	n/a	chr15:52263723-52263736 chr15:52264168-52264177
23	BHLHE40	chr15:52263473-52264158	GM12878	blood:	n/a	n/a
24	BHLHE40	chr15:52263297-52264121	K562	blood:	n/a	n/a
25	BRCA1	chr15:52263826-52264265	Hela-S3	cervix:	n/a	n/a
26	BRCA1	chr15:52263922-52264122	HepG2	liver:	n/a	n/a
27	CBX3	chr15:52263565-52264559	K562	blood:	n/a	n/a
28	CCNT2	chr15:52263505-52264246	K562	blood:	n/a	chr15:52264167-52264176
29	CCNT2	chr15:52262176-52262312	K562	blood:	n/a	n/a
30	CEBPB	chr15:52265140-52265635	MCF-7	breast:	n/a	n/a
31	CEBPB	chr15:52262209-52262605	K562	blood:	n/a	chr15:52262409-52262420
32	CEBPB	chr15:52265123-52265666	MCF-7	breast:	n/a	n/a
33	CEBPB	chr15:52262228-52262595	IMR90	lung:	n/a	chr15:52262409-52262420
34	CEBPB	chr15:52262026-52262696	MCF-7	breast:	n/a	chr15:52262409-52262420
35	CEBPB	chr15:52271916-52271942	H1-hESC	embryonic stem cell:	n/a	n/a
36	CEBPB	chr15:52265280-52265573	HepG2	liver:	n/a	n/a
37	CEBPB	chr15:52263526-52264228	Hela-S3	cervix:	n/a	n/a
38	CEBPB	chr15:52271910-52271954	K562	blood:	n/a	chr15:52271941-52271952
39	CEBPB	chr15:52262007-52262765	MCF-7	breast:	n/a	chr15:52262409-52262420
40	CEBPB	chr15:52261997-52262601	Hela-S3	cervix:	n/a	chr15:52262409-52262420
41	CEBPB	chr15:52271930-52271958	HepG2	liver:	n/a	chr15:52271941-52271952
42	CEBPB	chr15:52262239-52262624	HepG2	liver:	n/a	chr15:52262409-52262420
43	CEBPB	chr15:52263844-52264240	IMR90	lung:	n/a	n/a
44	CEBPB	chr15:52263627-52264319	GM12878	blood:	n/a	n/a
45	CEBPB	chr15:52263862-52264176	K562	blood:	n/a	n/a
46	CEBPB	chr15:52262240-52262596	A549	lung:	n/a	chr15:52262409-52262420
47	CEBPB	chr15:52263861-52264291	HepG2	liver:	n/a	n/a
48	CEBPB	chr15:52262259-52262571	H1-hESC	embryonic stem cell:	n/a	chr15:52262409-52262420
49	CEBPB	chr15:52263807-52264238	K562	blood:	n/a	n/a
50	CEBPD	chr15:52263566-52264231	HepG2	liver:	n/a	n/a

(count:916 , 50 per page) page: 1 2 3 4 5 6 7 ... 19

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr15:52264133-52264183	NT2-D1	testis:	n/a
2	chr15:52264133-52264183	NT2-D1	testis:	n/a
3	chr15:52264396-52264446	HCT-116	colon:	n/a
4	chr15:52260669-52260719	HIPEpiC	eye:	n/a
5	chr15:52263485-52263535	ovcar-3	ovarian:	n/a
6	chr15:52263946-52263996	T-47D	breast:	n/a
7	chr15:52260669-52260719	AG09319	gingival:	n/a
8	chr15:52263839-52263889	ProgFib	skin:	n/a
9	chr15:52263946-52263996	HIPEpiC	eye:	n/a
10	chr15:52264002-52264052	ovcar-3	ovarian:	n/a
11	chr15:52263786-52263836	HPAEpiC	pulmonary alveolar:	n/a
12	chr15:52263839-52263889	HRCEpiC	kidney:	n/a
13	chr15:52264074-52264124	HIPEpiC	eye:	n/a
14	chr15:52264396-52264446	AG10803	skin:	n/a
15	chr15:52264097-52264147	SK-N-SH	brain:	n/a
16	chr15:52267193-52267243	NB4	blood:	n/a
17	chr15:52264224-52264274	T-47D	breast:	n/a
18	chr15:52264074-52264124	PFSK-1	brain:	n/a
19	chr15:52264133-52264183	CMK	blood:	n/a
20	chr15:52264224-52264274	SK-N-SH	brain:	n/a
21	chr15:52263946-52263996	AG04450	lung:	fetal
22	chr15:52263485-52263535	BJ	skin:	n/a
23	chr15:52264002-52264052	HPAEpiC	pulmonary alveolar:	n/a
24	chr15:52263597-52263647	SK-N-MC	brain:	n/a
25	chr15:52267193-52267243	HL-60	blood:	n/a
26	chr15:52263786-52263836	ProgFib	skin:	n/a
27	chr15:52263839-52263889	GM12878	blood:	n/a
28	chr15:52264263-52264313	ovcar-3	ovarian:	n/a
29	chr15:52264097-52264147	SAEC	small airway:	n/a
30	chr15:52263786-52263836	NHDF-neo	bronchial:	n/a
31	chr15:52263485-52263535	HAEpiC	amniotic membrane:	n/a
32	chr15:52264133-52264183	ovcar-3	ovarian:	n/a
33	chr15:52264074-52264124	MCF-7	breast:	n/a
34	chr15:52264263-52264313	HCM	heart:	n/a
35	chr15:52260669-52260719	HEK293	kidney:	embryo
36	chr15:52263839-52263889	A549	lung:	n/a
37	chr15:52263946-52263996	SK-N-SH	brain:	n/a
38	chr15:52264097-52264147	GM12878	blood:	n/a
39	chr15:52264224-52264274	MCF10A-Er-Src	breast:	n/a
40	chr15:52264396-52264446	K562	blood:	n/a
41	chr15:52260669-52260719	NT2-D1	testis:	n/a
42	chr15:52264263-52264313	HCPEpiC	choroid plexus:	n/a
43	chr15:52263839-52263889	BJ	skin:	n/a
44	chr15:52263839-52263889	NHDF-neo	bronchial:	n/a
45	chr15:52264263-52264313	HNPCEpiC	eye:	n/a
46	chr15:52263597-52263647	HNPCEpiC	eye:	n/a
47	chr15:52260669-52260719	NH-A	brain:	n/a
48	chr15:52263485-52263535	IMR90	lung:	fetal
49	chr15:52264002-52264052	RPTEC	kidney:	n/a
50	chr15:52263597-52263647	RPTEC	kidney:	n/a

(count:58 , 50 per page) page: 1 2

No.	Distal block	Cell Line	Cell type
1	chr15:52165419..52167687-chr15:52262244..52264140,2	MCF-7	breast:
2	chr15:52266394..52269371-chr17:57935595..57937194,2	MCF-7	breast:
3	chr15:52263578..52264205-chr16:30905028..30905583,2	Hela-S3	cervix:
4	chr15:52262830..52265268-chr15:52372078..52374982,4	MCF-7	breast:
5	chr15:52244109..52249001-chr15:52262072..52265545,5	MCF-7	breast:
6	chr15:52263277..52265007-chr15:52427883..52430038,2	MCF-7	breast:
7	chr15:52273041..52275862-chr15:52300749..52303075,2	MCF-7	breast:
8	chr15:52262407..52265136-chr15:52430706..52432521,2	MCF-7	breast:
9	chr15:52241662..52244027-chr15:52256794..52258738,3	MCF-7	breast:
10	chr15:52258924..52260672-chr15:52262065..52263877,2	K562	blood:
11	chr15:52262263..52265564-chr15:52309489..52315686,9	K562	blood:
12	chr15:52269337..52272220-chr15:52273087..52274635,2	MCF-7	breast:
13	chr15:52271865..52274806-chr15:52313995..52316353,2	MCF-7	breast:
14	chr15:52264141..52265648-chr15:52426026..52428333,2	MCF-7	breast:
15	chr15:52269022..52271113-chr15:52277354..52279460,2	MCF-7	breast:
16	chr15:52262628..52265811-chr15:52469801..52473537,4	MCF-7	breast:
17	chr15:52267594..52270331-chr15:52272576..52274636,3	MCF-7	breast:
18	chr15:52264035..52264681-chr19:46498316..46499226,2	NB4	blood:
19	chr15:52094295..52095871-chr15:52261900..52263731,2	MCF-7	breast:
20	chr15:52262398..52265193-chr15:52386264..52389426,3	MCF-7	breast:
21	chr15:52272788..52276993-chr15:52369760..52371998,4	MCF-7	breast:
22	chr15:52273097..52274841-chr15:52286884..52288398,2	K562	blood:
23	chr15:52263208..52265625-chr15:52404085..52407650,4	MCF-7	breast:
24	chr15:52269337..52272220-chr15:52273087..52274635,2	MCF-7	breast:
25	chr15:52250643..52258110-chr15:52261122..52265819,12	MCF-7	breast:
26	chr15:52266921..52268436-chr15:52310388..52312798,2	MCF-7	breast:
27	chr15:52271637..52274025-chr15:52275587..52277212,2	MCF-7	breast:
28	chr15:52262536..52264088-chr15:52296110..52298428,2	MCF-7	breast:
29	chr15:52272323..52273861-chr15:52410160..52412706,2	MCF-7	breast:
30	chr15:52264304..52267297-chr15:52410135..52412517,2	MCF-7	breast:
31	chr15:52248345..52251299-chr15:52257888..52259558,2	MCF-7	breast:
32	chr15:52259207..52267788-chr15:52308373..52314434,24	MCF-7	breast:
33	chr15:52267047..52268763-chr15:52371441..52374035,2	K562	blood:
34	chr15:52272443..52274627-chr15:52305698..52308304,2	K562	blood:
35	chr1:86173626..86174408-chr15:52263575..52264268,2	NB4	blood:
36	chr15:52262650..52264778-chr15:52432288..52435005,3	MCF-7	breast:
37	chr15:52263605..52264209-chr5:10353462..10354012,2	HCT-116	colon:
38	chr15:52272756..52275955-chr15:52369833..52372310,3	MCF-7	breast:
39	chr15:52262145..52266701-chr15:52309209..52314377,19	MCF-7	breast:
40	chr15:52258228..52260672-chr15:52262065..52264472,4	K562	blood:
41	chr15:52261233..52265470-chr15:52469433..52474401,7	MCF-7	breast:
42	chr15:52267594..52270331-chr15:52272576..52274636,3	MCF-7	breast:
43	chr15:52258924..52260672-chr15:52262065..52263877,2	K562	blood:
44	chr15:52257155..52261897-chr15:52262401..52265766,14	MCF-7	breast:
45	chr15:52272584..52276027-chr15:52308541..52312916,5	K562	blood:
46	chr15:52272035..52276768-chr15:52309954..52313442,7	MCF-7	breast:
47	chr15:52073675..52076293-chr15:52262420..52265302,2	MCF-7	breast:
48	chr15:52253083..52256570-chr15:52257033..52260699,4	MCF-7	breast:
49	chr15:52268028..52270216-chr15:52470821..52473204,2	MCF-7	breast:
50	chr10:102757447..102758184-chr15:52258197..52259074,2	MCF-7	breast:

(count:1 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-MAPK6-12	chr15:52263674-52264103	NONHSAT043898

No data

Variant related genes	Relation type
LEO1	TF binding region
LEO1	CpG island
ENSG00000259802	chromatin interactions
ENSG00000117174	chromatin interactions
ENSG00000137875	chromatin interactions
ENSG00000104983	chromatin interactions
ENSG00000242327	chromatin interactions
ENSG00000259438	chromatin interactions
ENSG00000211591	chromatin interactions
ENSG00000259178	chromatin interactions
ENSG00000141428	chromatin interactions
ENSG00000166477	chromatin interactions
ENSG00000145495	chromatin interactions
ENSG00000128872	chromatin interactions
ENSG00000099385	chromatin interactions
ENSG00000069956	chromatin interactions
ENSG00000069966	chromatin interactions
ENSG00000138594	chromatin interactions
ENSG00000259577	chromatin interactions
ENSG00000107816	chromatin interactions

Extended variants
information (count: 616 )
Associated
traits (count: 58 )

Variant overlapped rSNPs/rCNVs (count:616 , 50 per page) page: 1 2 3 4 5 6 7 ... 13

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs2241503	chr15:52257874-52257875	Weak transcription Strong transcription Enhancers ZNF genes & repeats	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
2	rs2593203	chr15:52257896-52257897	Weak transcription Strong transcription Enhancers ZNF genes & repeats	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
3	rs368641630	chr15:52257911-52257912	Weak transcription Strong transcription Enhancers ZNF genes & repeats	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
4	rs374849668	chr15:52257964-52257965	Weak transcription Strong transcription Enhancers ZNF genes & repeats	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
5	rs144504049	chr15:52257996-52257997	Weak transcription Strong transcription Enhancers ZNF genes & repeats	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
6	rs200556754	chr15:52258005-52258006	Weak transcription Strong transcription ZNF genes & repeats Enhancers Genic enhancers Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
7	rs376639956	chr15:52258059-52258060	Weak transcription Strong transcription ZNF genes & repeats Enhancers Genic enhancers Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
8	rs111647640	chr15:52258070-52258071	Weak transcription Strong transcription ZNF genes & repeats Enhancers Genic enhancers Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
9	rs147835501	chr15:52258105-52258106	Weak transcription Strong transcription ZNF genes & repeats Enhancers Genic enhancers Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
10	rs141332132	chr15:52258109-52258110	Weak transcription Strong transcription ZNF genes & repeats Enhancers Genic enhancers Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
11	rs143527162	chr15:52258110-52258111	Weak transcription Strong transcription ZNF genes & repeats Enhancers Genic enhancers Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
12	rs368626497	chr15:52258113-52258114	Weak transcription Strong transcription ZNF genes & repeats Enhancers Genic enhancers Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
13	rs182446553	chr15:52258114-52258115	Weak transcription Strong transcription ZNF genes & repeats Enhancers Genic enhancers Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
14	rs151065984	chr15:52258118-52258119	Weak transcription Strong transcription ZNF genes & repeats Enhancers Genic enhancers Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
15	rs372315793	chr15:52258119-52258120	Weak transcription Strong transcription ZNF genes & repeats Enhancers Genic enhancers Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
16	rs373653843	chr15:52258160-52258161	Weak transcription Strong transcription ZNF genes & repeats Enhancers Genic enhancers Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
17	rs367757550	chr15:52258168-52258169	Weak transcription Strong transcription ZNF genes & repeats Enhancers Genic enhancers Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
18	rs114304676	chr15:52258169-52258170	Weak transcription Strong transcription ZNF genes & repeats Enhancers Genic enhancers Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
19	rs376150994	chr15:52258219-52258220	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Active TSS	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
20	rs202222424	chr15:52258220-52258221	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Active TSS	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
21	rs201276820	chr15:52258261-52258262	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Active TSS	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
22	rs116532084	chr15:52258276-52258277	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Active TSS	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
23	rs369348264	chr15:52258289-52258290	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Active TSS	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
24	rs140972492	chr15:52258331-52258332	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Active TSS	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
25	rs150198878	chr15:52258333-52258334	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Active TSS	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
26	rs372368131	chr15:52258364-52258365	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Active TSS	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
27	rs61740444	chr15:52258391-52258392	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Active TSS	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
28	rs138801844	chr15:52258397-52258398	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Active TSS	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
29	rs572000222	chr15:52258418-52258419	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Active TSS	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
30	rs377122630	chr15:52258419-52258420	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Active TSS	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
31	rs149086157	chr15:52258425-52258426	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Active TSS	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
32	rs373962226	chr15:52258483-52258484	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Active TSS	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
33	rs565950272	chr15:52258524-52258525	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Active TSS	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
34	rs142281993	chr15:52258556-52258557	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Active TSS	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
35	rs145889790	chr15:52258559-52258560	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Active TSS	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
36	rs369164252	chr15:52258568-52258569	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Active TSS	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
37	rs138450382	chr15:52258570-52258571	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Active TSS	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
38	rs372749898	chr15:52258593-52258594	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Active TSS	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
39	rs377161423	chr15:52258655-52258656	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
40	rs370588753	chr15:52258657-52258658	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
41	rs564460997	chr15:52258662-52258663	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
42	rs548684781	chr15:52258681-52258682	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
43	rs78529090	chr15:52258697-52258698	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
44	rs536873411	chr15:52258743-52258744	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
45	rs558350760	chr15:52258829-52258830	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
46	rs576594312	chr15:52258845-52258846	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
47	rs376699216	chr15:52258846-52258847	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
48	rs547017863	chr15:52258934-52258935	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
49	rs540936248	chr15:52258963-52258964	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
50	rs559172987	chr15:52259027-52259028	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:58)

Disease	PMID	Source
Ewing''s sarcoma	21437220	CNVD
Schizophrenia	19415332	CNVD
Breast cancer	22522925	CNVD
Autism	22495311	CNVD
Wilms tumour	21544195	CNVD
Testicular germ cell tumor	18059402	CNVD
cataract	16735990	CNVD
Cancer	21637783	CNVD
Colorectal cancer	20709793	CNVD
Medulloblastoma	21979893	CNVD
spastic paraplegia with thinning of corpus callosum	19105190	CNVD
Schizophrenia	21324950	CNVD
Astrocytoma	17387387	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Disease	21824424	CNVD
Melanoma	18172304	CNVD
Colorectal cancer	16774939	CNVD
Gastric cancer	17167181	CNVD
Neuroblastoma	19435921	CNVD
Colorectal cancer	19359472	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Multiple myeloma	17077331	CNVD
Colorectal cancer	16272173	CNVD
Gastrointestinal stromal cancer	20470368	CNVD
Multiple myeloma	17550852	CNVD
Intellectual disability	22102821	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute myeloid leukemia	20729466	CNVD
Prostate cancer	16573809	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Multiple myeloma	20724749	CNVD
Lung cancer	18438408	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Breast cancer	21785460	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Prostate cancer	18632612	CNVD
small cell lung cancer	20016488	CNVD
Basal cell lymphoma	17053054	CNVD
Breast cancer	22032731	CNVD
Basal cell lymphoma	17170743	CNVD
Follicular lymphoma	17170743	CNVD
Hirschsprung''s Disease	21712996	CNVD
Myeloproliferative neoplasm	20015882	CNVD
Cancer	21129771	CNVD
Breast cancer	16272173	CNVD
Hepatocellular carcinoma	16750200	CNVD
Abnormal phenotypes	18644119	CNVD
Cancer	16751803	CNVD
Esophageal adenocarcinoma	18820669	CNVD
Gastrointestinal stromal cancer	20818650	CNVD
Breast cancer	21364760	CNVD
Ovarian clear cell carcinoma	21343371	CNVD
Myelofibrosis	22110671	CNVD
Pancreatic ductal adenocarcinoma	19077451	CNVD
early-passage human iPS cells	21368824	CNVD

Chromatin state (count:774 , 50 per page) page: 1 2 3 4 5 6 7 ... 16

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr15:52179600-52259800	Strong transcription	Monocytes-CD14+_RO01746	blood
2	chr15:52200400-52262200	Weak transcription	Stomach Mucosa	stomach
3	chr15:52222600-52259800	Strong transcription	Primary hematopoietic stem cells short term culture	blood
4	chr15:52226200-52259400	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
5	chr15:52227400-52258400	Strong transcription	Dnd41	blood
6	chr15:52233000-52258000	Strong transcription	Primary T helper cells fromperipheralblood	blood
7	chr15:52233600-52258000	Strong transcription	Primary B cells from peripheral blood	blood
8	chr15:52235600-52258000	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
9	chr15:52235800-52258000	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
10	chr15:52235800-52258600	Strong transcription	Primary T regulatory cells fromperipheralblood	blood
11	chr15:52235800-52259200	Strong transcription	Hela-S3	cervix
12	chr15:52236000-52258000	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
13	chr15:52236000-52258600	Strong transcription	HUES64 Cell Line	embryonic stem cell
14	chr15:52236000-52258800	Strong transcription	Fetal Thymus	thymus
15	chr15:52236200-52258800	Strong transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
16	chr15:52237000-52258400	Strong transcription	Fetal Muscle Trunk	muscle
17	chr15:52244600-52262600	Weak transcription	Fetal Heart	heart
18	chr15:52245600-52261800	Weak transcription	Pancreas	Pancrea
19	chr15:52245600-52262600	Weak transcription	iPS-15b Cell Line	embryonic stem cell
20	chr15:52245800-52258000	Weak transcription	Aorta	Aorta
21	chr15:52245800-52263000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
22	chr15:52245800-52263200	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
23	chr15:52246400-52262200	Weak transcription	NHLF	lung
24	chr15:52247000-52262400	Weak transcription	Colonic Mucosa	Colon
25	chr15:52249800-52263000	Weak transcription	Psoas Muscle	Psoas
26	chr15:52250400-52258000	Strong transcription	Cortex derived primary cultured neurospheres	brain
27	chr15:52250600-52258000	Strong transcription	Primary hematopoietic stem cells	blood
28	chr15:52252200-52258800	Strong transcription	Foreskin Fibroblast Primary Cells skin01	Skin
29	chr15:52253200-52259600	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
30	chr15:52253200-52259800	Weak transcription	ES-I3 Cell Line	embryonic stem cell
31	chr15:52253200-52262400	Weak transcription	Fetal Brain Male	brain
32	chr15:52253200-52262800	Weak transcription	HSMMtube	muscle
33	chr15:52253200-52263000	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
34	chr15:52253400-52259600	Weak transcription	Brain Angular Gyrus	brain
35	chr15:52253400-52262400	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
36	chr15:52253400-52262400	Weak transcription	Esophagus	oesophagus
37	chr15:52253600-52263000	Weak transcription	Right Ventricle	heart
38	chr15:52253800-52258000	Weak transcription	Brain Substantia Nigra	brain
39	chr15:52253800-52261800	Weak transcription	Small Intestine	intestine
40	chr15:52253800-52262800	Weak transcription	H9 Cell Line	embryonic stem cell
41	chr15:52253800-52263200	Weak transcription	Gastric	stomach
42	chr15:52254000-52259200	Weak transcription	Brain Cingulate Gyrus	brain
43	chr15:52254000-52259600	Weak transcription	Brain Anterior Caudate	brain
44	chr15:52254200-52259400	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
45	chr15:52254200-52261600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
46	chr15:52254200-52262200	Weak transcription	Placenta Amnion	Placenta Amnion
47	chr15:52254200-52262400	Weak transcription	Spleen	Spleen
48	chr15:52254200-52262600	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
49	chr15:52254200-52262800	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
50	chr15:52254200-52263200	Weak transcription	Left Ventricle	heart

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