No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
1 |
rs2414178 |
chr15:53001538-53001539 |
Active TSS Enhancers Flanking Active TSS Weak transcription
|
Chromatin interactive region
|
1 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
2 |
rs150418245 |
chr15:53001555-53001556 |
Active TSS Enhancers Flanking Active TSS Weak transcription
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
3 |
rs138405910 |
chr15:53001560-53001561 |
Active TSS Enhancers Flanking Active TSS Weak transcription
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
4 |
rs578016857 |
chr15:53001625-53001626 |
Active TSS Flanking Active TSS Enhancers Weak transcription
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
5 |
rs369723124 |
chr15:53001673-53001674 |
Active TSS Flanking Active TSS Enhancers Weak transcription
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
6 |
rs116252560 |
chr15:53001711-53001712 |
Active TSS Flanking Active TSS Enhancers Weak transcription
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
7 |
rs534603887 |
chr15:53001728-53001729 |
Active TSS Flanking Active TSS Enhancers Weak transcription
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
8 |
rs572451965 |
chr15:53001736-53001737 |
Active TSS Flanking Active TSS Enhancers Weak transcription
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
9 |
rs73409651 |
chr15:53001755-53001756 |
Active TSS Flanking Active TSS Enhancers Weak transcription
|
Chromatin interactive region
|
1 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
10 |
rs182237883 |
chr15:53001760-53001761 |
Active TSS Flanking Active TSS Enhancers Weak transcription
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
11 |
rs576206098 |
chr15:53001797-53001798 |
Active TSS Flanking Active TSS Enhancers Weak transcription
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
12 |
rs147252233 |
chr15:53001843-53001844 |
Active TSS Flanking Active TSS Enhancers Bivalent Enhancer Weak transcription
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
13 |
rs574082405 |
chr15:53001897-53001898 |
Active TSS Flanking Active TSS Enhancers Bivalent Enhancer Weak transcription
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
14 |
rs140592028 |
chr15:53001921-53001922 |
Active TSS Flanking Active TSS Enhancers Bivalent Enhancer Weak transcription
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
15 |
rs187581582 |
chr15:53001922-53001923 |
Active TSS Flanking Active TSS Enhancers Bivalent Enhancer Weak transcription
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
16 |
rs149334365 |
chr15:53001924-53001925 |
Active TSS Flanking Active TSS Enhancers Bivalent Enhancer Weak transcription
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
17 |
rs144546951 |
chr15:53001958-53001959 |
Active TSS Flanking Active TSS Enhancers Bivalent Enhancer Weak transcription
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
18 |
rs529625597 |
chr15:53001990-53001991 |
Active TSS Flanking Active TSS Enhancers Bivalent Enhancer Weak transcription
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
19 |
rs115056261 |
chr15:53002001-53002002 |
Active TSS Flanking Active TSS Enhancers Bivalent Enhancer Weak transcription
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
20 |
rs567944242 |
chr15:53002024-53002025 |
Active TSS Flanking Active TSS Enhancers Bivalent Enhancer Weak transcription
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
21 |
rs375686616 |
chr15:53002034-53002035 |
Active TSS Flanking Active TSS Enhancers Bivalent Enhancer Weak transcription
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
22 |
rs550314980 |
chr15:53002068-53002069 |
Active TSS Flanking Active TSS Enhancers Bivalent Enhancer Weak transcription
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
23 |
rs148443676 |
chr15:53002130-53002131 |
Active TSS Flanking Active TSS Enhancers Bivalent Enhancer Weak transcription
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
24 |
rs142622877 |
chr15:53002136-53002137 |
Active TSS Flanking Active TSS Enhancers Bivalent Enhancer Weak transcription
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
25 |
rs554295368 |
chr15:53002204-53002205 |
Flanking Active TSS Enhancers Weak transcription
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
26 |
rs146444559 |
chr15:53002230-53002231 |
Flanking Active TSS Enhancers Weak transcription
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
27 |
rs139877565 |
chr15:53002243-53002244 |
Flanking Active TSS Enhancers Weak transcription
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
28 |
rs143142016 |
chr15:53002285-53002286 |
Flanking Active TSS Enhancers Weak transcription
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
29 |
rs74515928 |
chr15:53002427-53002428 |
Enhancers Weak transcription Flanking Active TSS
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
30 |
rs192966991 |
chr15:53002539-53002540 |
Enhancers Weak transcription Flanking Active TSS
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
31 |
rs28677029 |
chr15:53002552-53002553 |
Enhancers Weak transcription Flanking Active TSS
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
32 |
rs561583170 |
chr15:53002570-53002571 |
Enhancers Weak transcription Flanking Active TSS
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
33 |
rs528132740 |
chr15:53002613-53002614 |
Enhancers Weak transcription Flanking Active TSS
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
34 |
rs557217081 |
chr15:53002632-53002633 |
Enhancers Weak transcription Flanking Active TSS
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
35 |
rs576606608 |
chr15:53002658-53002659 |
Enhancers Weak transcription Flanking Active TSS
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
36 |
rs60796630 |
chr15:53002670-53002671 |
Enhancers Weak transcription Flanking Active TSS
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
37 |
rs6493574 |
chr15:53002685-53002686 |
Enhancers Weak transcription Flanking Active TSS
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
38 |
rs371266187 |
chr15:53002688-53002689 |
Enhancers Weak transcription Flanking Active TSS
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
39 |
rs544031971 |
chr15:53002690-53002691 |
Enhancers Weak transcription Flanking Active TSS
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
40 |
rs529687534 |
chr15:53002744-53002745 |
Enhancers Weak transcription Flanking Active TSS
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
41 |
rs7167235 |
chr15:53002762-53002763 |
Enhancers Weak transcription Flanking Active TSS
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
42 |
rs184682912 |
chr15:53002801-53002802 |
Weak transcription Enhancers
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
43 |
rs73409655 |
chr15:53002845-53002846 |
Weak transcription Enhancers
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
44 |
rs550185948 |
chr15:53002848-53002849 |
Weak transcription Enhancers
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
45 |
rs571907848 |
chr15:53002870-53002871 |
Weak transcription Enhancers
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
46 |
rs532536486 |
chr15:53002877-53002878 |
Weak transcription Enhancers
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
47 |
rs532746218 |
chr15:53002891-53002892 |
Weak transcription Enhancers
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
48 |
rs547960182 |
chr15:53002903-53002904 |
Weak transcription Enhancers
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
49 |
rs566134201 |
chr15:53002920-53002921 |
Weak transcription Enhancers
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
50 |
rs536257769 |
chr15:53002925-53002926 |
Weak transcription Enhancers
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|