Variant report

Variant nsv569433
Chromosome Location chr15:53828686-53860607
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:177 , 50 per page) page: 1 2 3 4
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:53817400-53839400 Weak transcription Liver Liver
2 chr15:53823200-53832000 Weak transcription ES-I3 Cell Line embryonic stem cell
3 chr15:53827600-53829400 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
4 chr15:53827800-53829200 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
5 chr15:53828000-53829000 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
6 chr15:53828200-53829600 Enhancers Brain Germinal Matrix brain
7 chr15:53828400-53828800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
8 chr15:53828600-53829200 Flanking Active TSS A549 lung
9 chr15:53828600-53829400 Enhancers HepG2 liver
10 chr15:53828600-53829800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
11 chr15:53828800-53829000 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
12 chr15:53828800-53829200 Enhancers NH-A brain
13 chr15:53829000-53829400 Enhancers Cortex derived primary cultured neurospheres brain
14 chr15:53829000-53832400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
15 chr15:53829200-53829800 Enhancers A549 lung
16 chr15:53829800-53831400 Weak transcription A549 lung
17 chr15:53831400-53831600 Enhancers HUES6 Cell Line embryonic stem cell
18 chr15:53831400-53832600 Enhancers A549 lung
19 chr15:53831600-53832000 Flanking Active TSS HUES6 Cell Line embryonic stem cell
20 chr15:53831600-53832200 Active TSS iPS-15b Cell Line embryonic stem cell
21 chr15:53832000-53832800 Active TSS ES-WA7 Cell Line embryonic stem cell
22 chr15:53832000-53833000 Active TSS HUES64 Cell Line embryonic stem cell
23 chr15:53832000-53833400 Active TSS ES-I3 Cell Line embryonic stem cell
24 chr15:53832000-53833400 Active TSS HUES6 Cell Line embryonic stem cell
25 chr15:53832200-53832600 Flanking Active TSS iPS-15b Cell Line embryonic stem cell
26 chr15:53832200-53833000 Active TSS HUES48 Cell Line embryonic stem cell
27 chr15:53832200-53833200 Active TSS H1 Cell Line embryonic stem cell
28 chr15:53832400-53832800 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
29 chr15:53832400-53833000 Active TSS iPS-18 Cell Line embryonic stem cell
30 chr15:53832400-53833400 Active TSS H9 Cell Line embryonic stem cell
31 chr15:53832600-53833200 Active TSS iPS-15b Cell Line embryonic stem cell
32 chr15:53832800-53833200 Active TSS Placenta Placenta
33 chr15:53833200-53833600 Weak transcription H1 Cell Line embryonic stem cell
34 chr15:53833600-53833800 Enhancers H1 Cell Line embryonic stem cell
35 chr15:53839400-53840800 Strong transcription Liver Liver
36 chr15:53840200-53842400 Enhancers HepG2 liver
37 chr15:53840400-53841000 Enhancers Cortex derived primary cultured neurospheres brain
38 chr15:53840400-53842400 Enhancers iPS-18 Cell Line embryonic stem cell
39 chr15:53840800-53842000 Weak transcription Liver Liver
40 chr15:53840800-53842600 Enhancers HUES64 Cell Line embryonic stem cell
41 chr15:53841000-53842400 Enhancers HUES6 Cell Line embryonic stem cell
42 chr15:53841000-53842600 Enhancers HUES48 Cell Line embryonic stem cell
43 chr15:53841000-53842600 Enhancers iPS-15b Cell Line embryonic stem cell
44 chr15:53841200-53842000 Enhancers ES-I3 Cell Line embryonic stem cell
45 chr15:53841200-53842200 Enhancers H1 Cell Line embryonic stem cell
46 chr15:53841400-53841600 Enhancers Sigmoid Colon Sigmoid Colon
47 chr15:53841400-53842400 Enhancers ES-UCSF4 Cell Line embryonic stem cell
48 chr15:53841600-53841800 Enhancers Duodenum Mucosa Duodenum
49 chr15:53841800-53842200 Flanking Active TSS Duodenum Mucosa Duodenum
50 chr15:53841800-53842600 Enhancers Fetal Intestine Small intestine

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