Variant report

Variant nsv569452
Chromosome Location chr15:54080810-54156980
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:275 , 50 per page) page: 1 2 3 4 5 6
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:54078600-54081400 Weak transcription Duodenum Mucosa Duodenum
2 chr15:54079800-54082400 Weak transcription Fetal Intestine Small intestine
3 chr15:54081400-54081800 Enhancers Duodenum Mucosa Duodenum
4 chr15:54081800-54083000 Weak transcription Duodenum Mucosa Duodenum
5 chr15:54082000-54084000 Enhancers Stomach Mucosa stomach
6 chr15:54082400-54083800 Enhancers Fetal Intestine Small intestine
7 chr15:54083000-54083200 Enhancers Small Intestine intestine
8 chr15:54083000-54083400 Enhancers Breast Myoepithelial Primary Cells Breast
9 chr15:54083000-54084600 Enhancers Duodenum Mucosa Duodenum
10 chr15:54083200-54083400 Flanking Bivalent TSS/Enh Left Ventricle heart
11 chr15:54083800-54084400 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
12 chr15:54084000-54084600 Weak transcription Stomach Mucosa stomach
13 chr15:54084600-54084800 Enhancers Stomach Mucosa stomach
14 chr15:54099600-54099800 Enhancers Duodenum Mucosa Duodenum
15 chr15:54099600-54100000 Enhancers Stomach Smooth Muscle stomach
16 chr15:54099600-54100200 Enhancers Cortex derived primary cultured neurospheres brain
17 chr15:54099600-54100400 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
18 chr15:54099600-54100400 Enhancers Brain Hippocampus Middle brain
19 chr15:54099600-54101000 Enhancers Fetal Lung lung
20 chr15:54099600-54101200 Enhancers Fetal Stomach stomach
21 chr15:54099800-54100000 Enhancers Brain Angular Gyrus brain
22 chr15:54099800-54100000 Enhancers Fetal Intestine Large intestine
23 chr15:54099800-54100200 Enhancers Brain Germinal Matrix brain
24 chr15:54099800-54100200 Enhancers Stomach Mucosa stomach
25 chr15:54099800-54100400 Weak transcription Duodenum Mucosa Duodenum
26 chr15:54099800-54100400 Enhancers Fetal Kidney kidney
27 chr15:54099800-54104200 Enhancers HepG2 liver
28 chr15:54100000-54100200 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
29 chr15:54100000-54101000 Enhancers Duodenum Smooth Muscle Duodenum
30 chr15:54100000-54104000 Weak transcription Fetal Intestine Large intestine
31 chr15:54100200-54101000 Enhancers Fetal Intestine Small intestine
32 chr15:54100200-54101000 Enhancers Rectal Mucosa Donor 31 rectum
33 chr15:54100200-54104400 Weak transcription Stomach Mucosa stomach
34 chr15:54100400-54101000 Enhancers Duodenum Mucosa Duodenum
35 chr15:54100400-54101600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
36 chr15:54100400-54101600 Weak transcription Fetal Kidney kidney
37 chr15:54101000-54101800 Weak transcription Fetal Intestine Small intestine
38 chr15:54101000-54103000 Weak transcription Fetal Lung lung
39 chr15:54101200-54105600 Weak transcription Fetal Stomach stomach
40 chr15:54101600-54101800 Enhancers Fetal Kidney kidney
41 chr15:54101600-54102600 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
42 chr15:54101800-54102200 Enhancers Fetal Intestine Small intestine
43 chr15:54102200-54104600 Weak transcription Fetal Intestine Small intestine
44 chr15:54102600-54103000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
45 chr15:54103000-54103200 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
46 chr15:54103000-54103400 Enhancers Fetal Lung lung
47 chr15:54103200-54103600 Flanking Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
48 chr15:54103600-54103800 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
49 chr15:54103800-54104400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
50 chr15:54104000-54105400 Enhancers Fetal Intestine Large intestine

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